RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 KAZALD1Q96I82 304 aa18.04■□□□□ 0.48
CD4-202ENST00000437800 QSER1Q2KHR3 1735 aa18.03■□□□□ 0.48
CD4-202ENST00000437800 DDX11L8A8MPP1 907 aa18.03■□□□□ 0.48
CD4-202ENST00000437800 CDC45O75419 566 aa18.03■□□□□ 0.48
CD4-202ENST00000437800 POLA2Q14181 598 aa18.03■□□□□ 0.48
CD4-202ENST00000437800 SYNE4Q8N205 404 aa18.03■□□□□ 0.48
CD4-202ENST00000437800 KIF2CQ99661 725 aa18.03■□□□□ 0.48
CD4-202ENST00000437800 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
CD4-202ENST00000437800 EPHA10Q5JZY3 1008 aa18.02■□□□□ 0.48
CD4-202ENST00000437800 PPP1R42Q7Z4L9 355 aa18.02■□□□□ 0.48
CD4-202ENST00000437800 C16orf71Q8IYS4 520 aaPredicted RBP18.02■□□□□ 0.48
CD4-202ENST00000437800 FAM89AQ96GI7 184 aa18.02■□□□□ 0.48
CD4-202ENST00000437800 DDX60Q8IY21 1712 aaKnown RBP18.02■□□□□ 0.48
CD4-202ENST00000437800 ESPNB1AK53 854 aa18.02■□□□□ 0.47
CD4-202ENST00000437800 H7C1W4 665 aa18.02■□□□□ 0.47
CD4-202ENST00000437800 MRE11P49959 708 aa18.02■□□□□ 0.47
CD4-202ENST00000437800 CLEC4GQ6UXB4 293 aa18.02■□□□□ 0.47
CD4-202ENST00000437800 CCDC125Q86Z20 511 aa18.02■□□□□ 0.47
CD4-202ENST00000437800 PLEKHM2Q8IWE5 1019 aa18.02■□□□□ 0.47
CD4-202ENST00000437800 BICC1Q9H694 974 aaKnown RBP18.02■□□□□ 0.47
CD4-202ENST00000437800 ISY1Q9ULR0 285 aaKnown RBP18.02■□□□□ 0.47
CD4-202ENST00000437800 EXOC6BQ9Y2D4 811 aa18.02■□□□□ 0.47
CD4-202ENST00000437800 LAMB2P55268 1798 aa18.02■□□□□ 0.47
CD4-202ENST00000437800 CASZ1Q86V15 1759 aa18.02■□□□□ 0.47
CD4-202ENST00000437800 MYH3P11055 1940 aa18.01■□□□□ 0.47
CD4-202ENST00000437800 SUSD4Q5VX71 490 aa18.01■□□□□ 0.47
CD4-202ENST00000437800 COL23A1Q86Y22 540 aaPredicted RBP18.01■□□□□ 0.47
CD4-202ENST00000437800 SMARCA5O60264 1052 aaPredicted RBP18.01■□□□□ 0.47
CD4-202ENST00000437800 HMGB2P26583 209 aaKnown RBP18.01■□□□□ 0.47
CD4-202ENST00000437800 MTX1Q13505 466 aa18.01■□□□□ 0.47
CD4-202ENST00000437800 UPF1Q92900 1129 aaKnown RBP eCLIP18.01■□□□□ 0.47
CD4-202ENST00000437800 TRMT112Q9UI30 125 aaKnown RBP18.01■□□□□ 0.47
CD4-202ENST00000437800 PCCAP05165 728 aaPredicted RBP18■□□□□ 0.47
CD4-202ENST00000437800 GYS1P13807 737 aa18■□□□□ 0.47
CD4-202ENST00000437800 SLC15A2Q16348 729 aa18■□□□□ 0.47
CD4-202ENST00000437800 STK32BQ9NY57 414 aa18■□□□□ 0.47
CD4-202ENST00000437800 NTSR2O95665 410 aa17.99■□□□□ 0.47
CD4-202ENST00000437800 ZBTB38Q8NAP3 1195 aaPredicted RBP17.99■□□□□ 0.47
CD4-202ENST00000437800 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
CD4-202ENST00000437800 OTUD7AQ8TE49 926 aaPredicted RBP17.99■□□□□ 0.47
CD4-202ENST00000437800 APBB1O00213 710 aa17.99■□□□□ 0.47
CD4-202ENST00000437800 SRGAP3O43295 1099 aa17.99■□□□□ 0.47
CD4-202ENST00000437800 PTMSP20962 102 aa17.99■□□□□ 0.47
CD4-202ENST00000437800 PARP10Q53GL7 1025 aa17.99■□□□□ 0.47
CD4-202ENST00000437800 RGL2O15211 777 aa17.98■□□□□ 0.47
CD4-202ENST00000437800 NUTM1Q86Y26 1132 aa17.98■□□□□ 0.47
CD4-202ENST00000437800 MAP7D2Q96T17 732 aa17.98■□□□□ 0.47
CD4-202ENST00000437800 TRAK2O60296 914 aa17.98■□□□□ 0.47
CD4-202ENST00000437800 TTC22Q5TAA0 569 aa17.98■□□□□ 0.47
CD4-202ENST00000437800 ILDR2Q71H61 639 aa17.98■□□□□ 0.47
CD4-202ENST00000437800 UTP14AQ9BVJ6 771 aaKnown RBP17.98■□□□□ 0.47
CD4-202ENST00000437800 GSPT1P15170 499 aaKnown RBP17.97■□□□□ 0.47
CD4-202ENST00000437800 NFIXQ14938 502 aa17.97■□□□□ 0.47
CD4-202ENST00000437800 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
CD4-202ENST00000437800 ABCC12Q96J65 1359 aa17.97■□□□□ 0.47
CD4-202ENST00000437800 A0A0U1RQG5 324 aaPredicted RBP17.96■□□□□ 0.47
CD4-202ENST00000437800 K7ELQ4 463 aaPredicted RBP17.96■□□□□ 0.47
CD4-202ENST00000437800 RAB3GAP1Q15042 981 aa17.96■□□□□ 0.47
CD4-202ENST00000437800 SETDB2Q96T68 719 aa17.96■□□□□ 0.47
CD4-202ENST00000437800 SH3TC1Q8TE82 1336 aa17.96■□□□□ 0.47
CD4-202ENST00000437800 CDHR2Q9BYE9 1310 aa17.96■□□□□ 0.47
CD4-202ENST00000437800 CARMIL3Q8ND23 1372 aa17.96■□□□□ 0.47
CD4-202ENST00000437800 IRS4O14654 1257 aaPredicted RBP17.96■□□□□ 0.47
CD4-202ENST00000437800 FOXO4P98177 505 aa17.96■□□□□ 0.47
CD4-202ENST00000437800 LRRCC1Q9C099 1032 aa17.96■□□□□ 0.47
CD4-202ENST00000437800 TNRC6CQ9HCJ0 1690 aaKnown RBP17.95■□□□□ 0.46
CD4-202ENST00000437800 MSL1Q68DK7 614 aa17.95■□□□□ 0.46
CD4-202ENST00000437800 PDGFDQ9GZP0 370 aaPredicted RBP17.95■□□□□ 0.46
CD4-202ENST00000437800 SALL3Q9BXA9 1300 aa17.95■□□□□ 0.46
CD4-202ENST00000437800 HCLS1P14317 486 aaPredicted RBP17.95■□□□□ 0.46
CD4-202ENST00000437800 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
CD4-202ENST00000437800 LMBR1LQ6UX01 489 aa17.95■□□□□ 0.46
CD4-202ENST00000437800 CCDC24Q8N4L8 307 aa17.95■□□□□ 0.46
CD4-202ENST00000437800 FLAD1Q8NFF5 587 aa17.95■□□□□ 0.46
CD4-202ENST00000437800 GBP4Q96PP9 640 aa17.95■□□□□ 0.46
CD4-202ENST00000437800 CCDC85AQ96PX6 553 aaPredicted RBP17.95■□□□□ 0.46
CD4-202ENST00000437800 PANK2Q9BZ23 570 aa17.95■□□□□ 0.46
CD4-202ENST00000437800 SURF6O75683 361 aaKnown RBP17.94■□□□□ 0.46
CD4-202ENST00000437800 TERF1P54274 439 aa17.94■□□□□ 0.46
CD4-202ENST00000437800 ERFEQ4G0M1 354 aa17.94■□□□□ 0.46
CD4-202ENST00000437800 NBPF5PQ86XG9 351 aaPredicted RBP17.94■□□□□ 0.46
CD4-202ENST00000437800 OSBPL3Q9H4L5 887 aa17.94■□□□□ 0.46
CD4-202ENST00000437800 CHMP3Q9Y3E7 222 aa17.94■□□□□ 0.46
CD4-202ENST00000437800 RAB11FIP3O75154 756 aa17.93■□□□□ 0.46
CD4-202ENST00000437800 DDR1Q08345 913 aa17.93■□□□□ 0.46
CD4-202ENST00000437800 RABEP1Q15276 862 aa17.93■□□□□ 0.46
CD4-202ENST00000437800 CLEC17AQ6ZS10 378 aa17.93■□□□□ 0.46
CD4-202ENST00000437800 KLHDC4Q8TBB5 520 aa17.93■□□□□ 0.46
CD4-202ENST00000437800 PA2G4Q9UQ80 394 aaKnown RBP17.93■□□□□ 0.46
CD4-202ENST00000437800 SKOR2Q2VWA4 1001 aaPredicted RBP17.92■□□□□ 0.46
CD4-202ENST00000437800 TNPO1Q92973 898 aaKnown RBP17.92■□□□□ 0.46
CD4-202ENST00000437800 PLA2G12BQ9BX93 195 aa17.92■□□□□ 0.46
CD4-202ENST00000437800 CTSWP56202 376 aa17.92■□□□□ 0.46
CD4-202ENST00000437800 PDE1AP54750 535 aa17.91■□□□□ 0.46
CD4-202ENST00000437800 C3orf67Q6ZVT6 689 aa17.91■□□□□ 0.46
CD4-202ENST00000437800 RHPN1Q8TCX5 695 aa17.91■□□□□ 0.46
CD4-202ENST00000437800 SPEF2Q9C093 1822 aa17.91■□□□□ 0.46
CD4-202ENST00000437800 GTF2E1P29083 439 aaPredicted RBP17.9■□□□□ 0.46
CD4-202ENST00000437800 TM4SF1P30408 202 aa17.9■□□□□ 0.46
CD4-202ENST00000437800 NYXQ9GZU5 481 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms