RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ATG9AQ7Z3C6 839 aa18.67■□□□□ 0.58
SGCE-205ENST00000437425 CCDC8Q9H0W5 538 aaPredicted RBP18.67■□□□□ 0.58
SGCE-205ENST00000437425 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
SGCE-205ENST00000437425 KIF2CQ99661 725 aa18.66■□□□□ 0.58
SGCE-205ENST00000437425 UTP14AQ9BVJ6 771 aaKnown RBP18.66■□□□□ 0.58
SGCE-205ENST00000437425 DIAPH3Q9NSV4 1193 aa18.66■□□□□ 0.58
SGCE-205ENST00000437425 CEP126Q9P2H0 1117 aa18.66■□□□□ 0.58
SGCE-205ENST00000437425 RFX7Q2KHR2 1363 aa18.66■□□□□ 0.58
SGCE-205ENST00000437425 BTAF1O14981 1849 aa18.66■□□□□ 0.58
SGCE-205ENST00000437425 ANKRD18BA2A2Z9 1011 aa18.65■□□□□ 0.58
SGCE-205ENST00000437425 SEPT12Q8IYM1 358 aa18.65■□□□□ 0.58
SGCE-205ENST00000437425 TTLL11Q8NHH1 800 aa18.65■□□□□ 0.58
SGCE-205ENST00000437425 QTRT2Q9H974 415 aaKnown RBP18.65■□□□□ 0.58
SGCE-205ENST00000437425 RAD50Q92878 1312 aa18.65■□□□□ 0.58
SGCE-205ENST00000437425 SGSM2O43147 1006 aa18.64■□□□□ 0.58
SGCE-205ENST00000437425 KIAA1211Q6ZU35 1233 aa18.64■□□□□ 0.58
SGCE-205ENST00000437425 LINC00116Q8NCU8 138 aa18.64■□□□□ 0.58
SGCE-205ENST00000437425 UBN2Q6ZU65 1347 aa18.64■□□□□ 0.57
SGCE-205ENST00000437425 MYH14Q7Z406 1995 aaKnown RBP18.64■□□□□ 0.57
SGCE-205ENST00000437425 SLC4A3P48751 1232 aa18.64■□□□□ 0.57
SGCE-205ENST00000437425 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.64■□□□□ 0.57
SGCE-205ENST00000437425 IL17RAQ96F46 866 aa18.64■□□□□ 0.57
SGCE-205ENST00000437425 BCL11BQ9C0K0 894 aaPredicted RBP18.64■□□□□ 0.57
SGCE-205ENST00000437425 ANO2Q9NQ90 1003 aa18.64■□□□□ 0.57
SGCE-205ENST00000437425 DBNLQ9UJU6 430 aaKnown RBP18.64■□□□□ 0.57
SGCE-205ENST00000437425 MYH3P11055 1940 aa18.63■□□□□ 0.57
SGCE-205ENST00000437425 BCORQ6W2J9 1755 aa18.63■□□□□ 0.57
SGCE-205ENST00000437425 RPS6KA4O75676 772 aa18.63■□□□□ 0.57
SGCE-205ENST00000437425 RTL9Q8NET4 1388 aa18.62■□□□□ 0.57
SGCE-205ENST00000437425 ST18O60284 1047 aa18.62■□□□□ 0.57
SGCE-205ENST00000437425 CCNL1Q9UK58 526 aaPredicted RBP18.62■□□□□ 0.57
SGCE-205ENST00000437425 ZNF609O15014 1411 aa18.61■□□□□ 0.57
SGCE-205ENST00000437425 ITGA6P23229 1130 aa18.61■□□□□ 0.57
SGCE-205ENST00000437425 FAM196AQ6ZSG2 479 aa18.61■□□□□ 0.57
SGCE-205ENST00000437425 HAUS7Q99871 368 aa18.61■□□□□ 0.57
SGCE-205ENST00000437425 TLR7Q9NYK1 1049 aaKnown RBP18.61■□□□□ 0.57
SGCE-205ENST00000437425 NIP7Q9Y221 180 aaKnown RBP eCLIP18.61■□□□□ 0.57
SGCE-205ENST00000437425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.61■□□□□ 0.57
SGCE-205ENST00000437425 LY75O60449 1722 aa18.61■□□□□ 0.57
SGCE-205ENST00000437425 ABCC12Q96J65 1359 aa18.61■□□□□ 0.57
SGCE-205ENST00000437425 SBF2Q86WG5 1849 aa18.6■□□□□ 0.57
SGCE-205ENST00000437425 MAP4K4O95819 1239 aaPredicted RBP18.6■□□□□ 0.57
SGCE-205ENST00000437425 SUSD4Q5VX71 490 aa18.6■□□□□ 0.57
SGCE-205ENST00000437425 BOLA2Q9H3K6 86 aa18.6■□□□□ 0.57
SGCE-205ENST00000437425 MCM2P49736 904 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 LRRFIP1Q32MZ4 808 aaKnown RBP18.59■□□□□ 0.57
SGCE-205ENST00000437425 CCDC152Q4G0S7 254 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 LRRC24Q50LG9 513 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 ZNF772Q68DY9 489 aaPredicted RBP18.59■□□□□ 0.57
SGCE-205ENST00000437425 LDHAL6AQ6ZMR3 332 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 DBNDD2Q9BQY9 259 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 FSD1Q9BTV5 496 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 SNRKQ9NRH2 765 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 NARFQ9UHQ1 456 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 RTCBQ9Y3I0 505 aaKnown RBP18.59■□□□□ 0.57
SGCE-205ENST00000437425 A0A1B0GUL7 405 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 K7ELQ4 463 aaPredicted RBP18.59■□□□□ 0.57
SGCE-205ENST00000437425 NTSR2O95665 410 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 CCDC158Q5M9N0 1113 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 ZNF594Q96JF6 807 aaPredicted RBP18.59■□□□□ 0.57
SGCE-205ENST00000437425 NEUROD6Q96NK8 337 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 NYXQ9GZU5 481 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 GREM2Q9H772 168 aa18.59■□□□□ 0.57
SGCE-205ENST00000437425 LAMB2P55268 1798 aa18.58■□□□□ 0.57
SGCE-205ENST00000437425 SPEF2Q9C093 1822 aa18.58■□□□□ 0.56
SGCE-205ENST00000437425 HSPA4P34932 840 aa18.58■□□□□ 0.56
SGCE-205ENST00000437425 CWC27Q6UX04 472 aaKnown RBP18.58■□□□□ 0.56
SGCE-205ENST00000437425 CNNM1Q9NRU3 951 aa18.58■□□□□ 0.56
SGCE-205ENST00000437425 RIPOR2Q9Y4F9 1068 aa18.58■□□□□ 0.56
SGCE-205ENST00000437425 SCN7AQ01118 1682 aa18.58■□□□□ 0.56
SGCE-205ENST00000437425 MROH5Q6ZUA9 1318 aa18.58■□□□□ 0.56
SGCE-205ENST00000437425 ZPR1O75312 459 aa18.57■□□□□ 0.56
SGCE-205ENST00000437425 ADRA2BP18089 450 aa18.57■□□□□ 0.56
SGCE-205ENST00000437425 SLC27A3Q5K4L6 730 aa18.57■□□□□ 0.56
SGCE-205ENST00000437425 METTL24Q5JXM2 366 aa18.56■□□□□ 0.56
SGCE-205ENST00000437425 KRT27Q7Z3Y8 459 aa18.56■□□□□ 0.56
SGCE-205ENST00000437425 PUS3Q9BZE2 481 aaKnown RBP18.56■□□□□ 0.56
SGCE-205ENST00000437425 GNPATO15228 680 aa18.55■□□□□ 0.56
SGCE-205ENST00000437425 GORABQ5T7V8 394 aa18.55■□□□□ 0.56
SGCE-205ENST00000437425 SYNE4Q8N205 404 aa18.55■□□□□ 0.56
SGCE-205ENST00000437425 ZNF512BQ96KM6 892 aaPredicted RBP18.55■□□□□ 0.56
SGCE-205ENST00000437425 LSG1Q9H089 658 aaKnown RBP18.55■□□□□ 0.56
SGCE-205ENST00000437425 LRP5O75197 1615 aa18.55■□□□□ 0.56
SGCE-205ENST00000437425 TIMM10P62072 90 aa18.54■□□□□ 0.56
SGCE-205ENST00000437425 RBM6P78332 1123 aaKnown RBP18.54■□□□□ 0.56
SGCE-205ENST00000437425 KBTBD3Q8NAB2 608 aa18.54■□□□□ 0.56
SGCE-205ENST00000437425 ANTXR1Q9H6X2 564 aa18.54■□□□□ 0.56
SGCE-205ENST00000437425 CIZ1Q9ULV3 898 aaPredicted RBP18.54■□□□□ 0.56
SGCE-205ENST00000437425 IFIT1P09914 478 aaKnown RBP18.54■□□□□ 0.56
SGCE-205ENST00000437425 ATP2B3Q16720 1220 aa18.54■□□□□ 0.56
SGCE-205ENST00000437425 SLC10A5Q5PT55 438 aa18.54■□□□□ 0.56
SGCE-205ENST00000437425 PTF1AQ7RTS3 328 aa18.54■□□□□ 0.56
SGCE-205ENST00000437425 UPF1Q92900 1129 aaKnown RBP eCLIP18.54■□□□□ 0.56
SGCE-205ENST00000437425 TAF1LQ8IZX4 1826 aa18.53■□□□□ 0.56
SGCE-205ENST00000437425 RIC1Q4ADV7 1423 aa18.53■□□□□ 0.56
SGCE-205ENST00000437425 PDE8BO95263 885 aa18.53■□□□□ 0.56
SGCE-205ENST00000437425 HSP90AA1P07900 732 aaKnown RBP18.53■□□□□ 0.56
SGCE-205ENST00000437425 IGHMBP2P38935 993 aaKnown RBP18.53■□□□□ 0.56
SGCE-205ENST00000437425 TTC39AQ5SRH9 613 aa18.53■□□□□ 0.56
SGCE-205ENST00000437425 XAGE2Q96GT9 111 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms