RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 PARP3Q9Y6F1 533 aa26.52■■□□□ 1.84
YBX1-203ENST00000436427 SURF6O75683 361 aaKnown RBP26.51■■□□□ 1.83
YBX1-203ENST00000436427 ST5P78524 1137 aa26.51■■□□□ 1.83
YBX1-203ENST00000436427 SLC10A5Q5PT55 438 aa26.51■■□□□ 1.83
YBX1-203ENST00000436427 PA2G4Q9UQ80 394 aaKnown RBP26.51■■□□□ 1.83
YBX1-203ENST00000436427 APBB1O00213 710 aa26.5■■□□□ 1.83
YBX1-203ENST00000436427 R3HDM1Q15032 1099 aaKnown RBP26.5■■□□□ 1.83
YBX1-203ENST00000436427 CCDC57Q2TAC2 916 aa26.5■■□□□ 1.83
YBX1-203ENST00000436427 KLHDC4Q8TBB5 520 aa26.5■■□□□ 1.83
YBX1-203ENST00000436427 GREM2Q9H772 168 aa26.5■■□□□ 1.83
YBX1-203ENST00000436427 RFX5P48382 616 aaPredicted RBP26.49■■□□□ 1.83
YBX1-203ENST00000436427 IFIT5Q13325 482 aaKnown RBP26.49■■□□□ 1.83
YBX1-203ENST00000436427 CCDC152Q4G0S7 254 aa26.49■■□□□ 1.83
YBX1-203ENST00000436427 SLC16A10Q8TF71 515 aa26.49■■□□□ 1.83
YBX1-203ENST00000436427 NLRP3Q96P20 1036 aa26.49■■□□□ 1.83
YBX1-203ENST00000436427 OS9Q13438 667 aaPredicted RBP26.48■■□□□ 1.83
YBX1-203ENST00000436427 ANKRD45Q5TZF3 282 aa26.48■■□□□ 1.83
YBX1-203ENST00000436427 C3orf67Q6ZVT6 689 aa26.48■■□□□ 1.83
YBX1-203ENST00000436427 SIL1Q9H173 461 aa26.48■■□□□ 1.83
YBX1-203ENST00000436427 ITGA6P23229 1130 aa26.47■■□□□ 1.83
YBX1-203ENST00000436427 PTPN12Q05209 780 aaKnown RBP26.47■■□□□ 1.83
YBX1-203ENST00000436427 PDZRN3Q9UPQ7 1066 aa26.47■■□□□ 1.83
YBX1-203ENST00000436427 ANKRD18BA2A2Z9 1011 aa26.46■■□□□ 1.83
YBX1-203ENST00000436427 HSP90AB4PQ58FF6 505 aa26.46■■□□□ 1.83
YBX1-203ENST00000436427 TAF7LQ5H9L4 462 aa26.46■■□□□ 1.83
YBX1-203ENST00000436427 COPRSQ9NQ92 184 aa26.46■■□□□ 1.83
YBX1-203ENST00000436427 ZBTB47Q9UFB7 747 aaPredicted RBP26.46■■□□□ 1.83
YBX1-203ENST00000436427 NOP58Q9Y2X3 529 aaKnown RBP26.46■■□□□ 1.83
YBX1-203ENST00000436427 TNRC6CQ9HCJ0 1690 aaKnown RBP26.46■■□□□ 1.83
YBX1-203ENST00000436427 ZNF594Q96JF6 807 aaPredicted RBP26.45■■□□□ 1.83
YBX1-203ENST00000436427 BCL11AQ9H165 835 aa26.45■■□□□ 1.83
YBX1-203ENST00000436427 NRXN2Q9P2S2 1712 aa26.45■■□□□ 1.82
YBX1-203ENST00000436427 CASZ1Q86V15 1759 aa26.45■■□□□ 1.82
YBX1-203ENST00000436427 NUCB1Q02818 461 aa26.44■■□□□ 1.82
YBX1-203ENST00000436427 G3BP1Q13283 466 aaKnown RBP eCLIP26.44■■□□□ 1.82
YBX1-203ENST00000436427 SF3B3Q15393 1217 aaKnown RBP26.44■■□□□ 1.82
YBX1-203ENST00000436427 PSDA5PKW4 1024 aaPredicted RBP26.44■■□□□ 1.82
YBX1-203ENST00000436427 RAB11FIP3O75154 756 aa26.44■■□□□ 1.82
YBX1-203ENST00000436427 RIC1Q4ADV7 1423 aa26.43■■□□□ 1.82
YBX1-203ENST00000436427 ZBTB7AO95365 584 aa26.43■■□□□ 1.82
YBX1-203ENST00000436427 CHD1LQ86WJ1 897 aa26.43■■□□□ 1.82
YBX1-203ENST00000436427 SKAP1Q86WV1 359 aa26.43■■□□□ 1.82
YBX1-203ENST00000436427 LRRCC1Q9C099 1032 aa26.43■■□□□ 1.82
YBX1-203ENST00000436427 RTL9Q8NET4 1388 aa26.42■■□□□ 1.82
YBX1-203ENST00000436427 LNPKQ9C0E8 428 aa26.42■■□□□ 1.82
YBX1-203ENST00000436427 SEC31BQ9NQW1 1179 aa26.42■■□□□ 1.82
YBX1-203ENST00000436427 SMARCA5O60264 1052 aaPredicted RBP26.41■■□□□ 1.82
YBX1-203ENST00000436427 ERC1Q8IUD2 1116 aa26.4■■□□□ 1.82
YBX1-203ENST00000436427 RHPN1Q8TCX5 695 aa26.39■■□□□ 1.82
YBX1-203ENST00000436427 KIF1BPQ96EK5 621 aa26.39■■□□□ 1.82
YBX1-203ENST00000436427 BRIP1Q9BX63 1249 aa26.39■■□□□ 1.81
YBX1-203ENST00000436427 MTFR1LQ9H019 292 aa26.39■■□□□ 1.81
YBX1-203ENST00000436427 EYA2O00167 538 aa26.38■■□□□ 1.81
YBX1-203ENST00000436427 LRRC24Q50LG9 513 aa26.38■■□□□ 1.81
YBX1-203ENST00000436427 LDHAL6AQ6ZMR3 332 aa26.38■■□□□ 1.81
YBX1-203ENST00000436427 CDC5LQ99459 802 aaKnown RBP26.38■■□□□ 1.81
YBX1-203ENST00000436427 PUS3Q9BZE2 481 aaKnown RBP26.38■■□□□ 1.81
YBX1-203ENST00000436427 ATF5Q9Y2D1 282 aaPredicted RBP26.38■■□□□ 1.81
YBX1-203ENST00000436427 IGHMBP2P38935 993 aaKnown RBP26.37■■□□□ 1.81
YBX1-203ENST00000436427 DDX46Q7L014 1031 aaKnown RBP26.37■■□□□ 1.81
YBX1-203ENST00000436427 RPGRQ92834 1020 aaKnown RBP26.37■■□□□ 1.81
YBX1-203ENST00000436427 IL1RAPL2Q9NP60 686 aa26.37■■□□□ 1.81
YBX1-203ENST00000436427 CIAO1O76071 339 aa26.36■■□□□ 1.81
YBX1-203ENST00000436427 SASH1O94885 1247 aa26.36■■□□□ 1.81
YBX1-203ENST00000436427 IL15P40933 162 aaPredicted RBP26.36■■□□□ 1.81
YBX1-203ENST00000436427 RGS3P49796 1198 aa26.36■■□□□ 1.81
YBX1-203ENST00000436427 MPHOSPH8Q99549 860 aa26.36■■□□□ 1.81
YBX1-203ENST00000436427 CNNM1Q9NRU3 951 aa26.36■■□□□ 1.81
YBX1-203ENST00000436427 FBXO3Q9UK99 471 aa26.36■■□□□ 1.81
YBX1-203ENST00000436427 ANKRD31Q8N7Z5 1873 aa26.36■■□□□ 1.81
YBX1-203ENST00000436427 ATG9AQ7Z3C6 839 aa26.35■■□□□ 1.81
YBX1-203ENST00000436427 ANKRD18AQ8IVF6 992 aa26.35■■□□□ 1.81
YBX1-203ENST00000436427 PDE6BP35913 854 aa26.34■■□□□ 1.81
YBX1-203ENST00000436427 CRY2Q49AN0 593 aa26.34■■□□□ 1.81
YBX1-203ENST00000436427 LRP5O75197 1615 aa26.34■■□□□ 1.81
YBX1-203ENST00000436427 SPEF2Q9C093 1822 aa26.34■■□□□ 1.81
YBX1-203ENST00000436427 POLD1P28340 1107 aa26.34■■□□□ 1.81
YBX1-203ENST00000436427 COL4A1P02462 1669 aa26.33■■□□□ 1.81
YBX1-203ENST00000436427 PDE4AP27815 886 aa26.33■■□□□ 1.81
YBX1-203ENST00000436427 TFCP2Q12800 502 aa26.33■■□□□ 1.81
YBX1-203ENST00000436427 CELF1Q92879 486 aaKnown RBP26.33■■□□□ 1.81
YBX1-203ENST00000436427 RBM17Q96I25 401 aaKnown RBP26.33■■□□□ 1.81
YBX1-203ENST00000436427 KLRG2A4D1S0 409 aaPredicted RBP26.32■■□□□ 1.8
YBX1-203ENST00000436427 C16orf71Q8IYS4 520 aaPredicted RBP26.32■■□□□ 1.8
YBX1-203ENST00000436427 CLASRPQ8N2M8 674 aaKnown RBP26.32■■□□□ 1.8
YBX1-203ENST00000436427 TAF1P21675 1872 aa26.32■■□□□ 1.8
YBX1-203ENST00000436427 RIPOR2Q9Y4F9 1068 aa26.31■■□□□ 1.8
YBX1-203ENST00000436427 METTL24Q5JXM2 366 aa26.3■■□□□ 1.8
YBX1-203ENST00000436427 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.3■■□□□ 1.8
YBX1-203ENST00000436427 RPS8P62241 208 aaKnown RBP26.29■■□□□ 1.8
YBX1-203ENST00000436427 GRAPQ13588 217 aa26.29■■□□□ 1.8
YBX1-203ENST00000436427 GRAPLQ8TC17 118 aaPredicted RBP26.29■■□□□ 1.8
YBX1-203ENST00000436427 CEP126Q9P2H0 1117 aa26.29■■□□□ 1.8
YBX1-203ENST00000436427 BSDC1Q9NW68 430 aaPredicted RBP26.29■■□□□ 1.8
YBX1-203ENST00000436427 C10orf71Q711Q0 1435 aa26.28■■□□□ 1.8
YBX1-203ENST00000436427 SRGNP10124 158 aa26.28■■□□□ 1.8
YBX1-203ENST00000436427 AACSQ86V21 672 aa26.28■■□□□ 1.8
YBX1-203ENST00000436427 OTUD7AQ8TE49 926 aaPredicted RBP26.28■■□□□ 1.8
YBX1-203ENST00000436427 MROH5Q6ZUA9 1318 aa26.28■■□□□ 1.8
YBX1-203ENST00000436427 COL11A2P13942 1736 aaPredicted RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms