RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 MAP2K5Q13163 448 aa9.3□□□□□ -0.92
COL17A1-204ENST00000433822 NXF1Q9UBU9 619 aaKnown RBP9.3□□□□□ -0.92
COL17A1-204ENST00000433822 HOXA2O43364 376 aa9.29□□□□□ -0.92
COL17A1-204ENST00000433822 JUNDP17535 347 aa9.29□□□□□ -0.92
COL17A1-204ENST00000433822 RBM25P49756 843 aaKnown RBP9.29□□□□□ -0.92
COL17A1-204ENST00000433822 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
COL17A1-204ENST00000433822 CHD1LQ86WJ1 897 aa9.29□□□□□ -0.92
COL17A1-204ENST00000433822 PROSER2Q86WR7 435 aaPredicted RBP9.29□□□□□ -0.92
COL17A1-204ENST00000433822 HLA-CQ95604 372 aa9.29□□□□□ -0.92
COL17A1-204ENST00000433822 RGPD8O14715 1765 aaPredicted RBP9.29□□□□□ -0.92
COL17A1-204ENST00000433822 ADGRL3Q9HAR2 1447 aa9.29□□□□□ -0.92
COL17A1-204ENST00000433822 MAP3K19Q56UN5 1328 aa9.29□□□□□ -0.92
COL17A1-204ENST00000433822 MSH6P52701 1360 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 PLEKHG2Q9H7P9 1386 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 NFKBIBQ15653 356 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 RPAP2Q8IXW5 612 aaPredicted RBP9.28□□□□□ -0.92
COL17A1-204ENST00000433822 TSPYL6Q8N831 410 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 C8orf58Q8NAV2 365 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 CHMP4AQ9BY43 222 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 SLAIN2Q9P270 581 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 MST1RQ04912 1400 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 PXDNLA1KZ92 1463 aa9.28□□□□□ -0.92
COL17A1-204ENST00000433822 IRF6O14896 467 aa9.27□□□□□ -0.93
COL17A1-204ENST00000433822 SIAH2O43255 324 aa9.27□□□□□ -0.93
COL17A1-204ENST00000433822 KCNA6P17658 529 aa9.27□□□□□ -0.93
COL17A1-204ENST00000433822 FBLN1P23142 703 aa9.27□□□□□ -0.93
COL17A1-204ENST00000433822 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
COL17A1-204ENST00000433822 EHBP1Q8NDI1 1231 aa9.27□□□□□ -0.93
COL17A1-204ENST00000433822 ATP10DQ9P241 1426 aa9.27□□□□□ -0.93
COL17A1-204ENST00000433822 NHSL1Q5SYE7 1610 aa9.27□□□□□ -0.93
COL17A1-204ENST00000433822 OVOS2A0A0G2JMS6 1433 aa9.26□□□□□ -0.93
COL17A1-204ENST00000433822 NCAPD2Q15021 1401 aa9.26□□□□□ -0.93
COL17A1-204ENST00000433822 HSP90AB2PQ58FF8 381 aa9.26□□□□□ -0.93
COL17A1-204ENST00000433822 ANKRD44Q8N8A2 993 aa9.26□□□□□ -0.93
COL17A1-204ENST00000433822 SNX21Q969T3 373 aa9.26□□□□□ -0.93
COL17A1-204ENST00000433822 SLC26A8Q96RN1 970 aa9.26□□□□□ -0.93
COL17A1-204ENST00000433822 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
COL17A1-204ENST00000433822 ANTXR1Q9H6X2 564 aa9.26□□□□□ -0.93
COL17A1-204ENST00000433822 WASF2Q9Y6W5 498 aa9.26□□□□□ -0.93
COL17A1-204ENST00000433822 NCOA3Q9Y6Q9 1424 aa9.25□□□□□ -0.93
COL17A1-204ENST00000433822 CAPN5O15484 640 aaPredicted RBP9.25□□□□□ -0.93
COL17A1-204ENST00000433822 AEBP1Q8IUX7 1158 aa9.25□□□□□ -0.93
COL17A1-204ENST00000433822 NGDNQ8NEJ9 315 aaKnown RBP9.25□□□□□ -0.93
COL17A1-204ENST00000433822 IL27Q8NEV9 243 aa9.25□□□□□ -0.93
COL17A1-204ENST00000433822 IRF7Q92985 503 aa9.25□□□□□ -0.93
COL17A1-204ENST00000433822 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
COL17A1-204ENST00000433822 C22orf23Q9BZE7 217 aa9.25□□□□□ -0.93
COL17A1-204ENST00000433822 DCTPP1Q9H773 170 aa9.25□□□□□ -0.93
COL17A1-204ENST00000433822 LAS1LQ9Y4W2 734 aaKnown RBP9.25□□□□□ -0.93
COL17A1-204ENST00000433822 BRWD3Q6RI45 1802 aa9.25□□□□□ -0.93
COL17A1-204ENST00000433822 FAM208AQ9UK61 1670 aaKnown RBP9.25□□□□□ -0.93
COL17A1-204ENST00000433822 NFAT5O94916 1531 aa9.25□□□□□ -0.93
COL17A1-204ENST00000433822 CAMTA1Q9Y6Y1 1673 aa9.24□□□□□ -0.93
COL17A1-204ENST00000433822 GMPRP36959 345 aa9.24□□□□□ -0.93
COL17A1-204ENST00000433822 CCT4P50991 539 aaKnown RBP9.24□□□□□ -0.93
COL17A1-204ENST00000433822 RBM6P78332 1123 aaKnown RBP9.24□□□□□ -0.93
COL17A1-204ENST00000433822 GUCA2AQ02747 115 aa9.24□□□□□ -0.93
COL17A1-204ENST00000433822 RETREG3Q86VR2 466 aa9.24□□□□□ -0.93
COL17A1-204ENST00000433822 RTF1Q92541 710 aaKnown RBP9.24□□□□□ -0.93
COL17A1-204ENST00000433822 SLIT3O75094 1523 aa9.24□□□□□ -0.93
COL17A1-204ENST00000433822 ABCC6O95255 1503 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 FAM83GA6ND36 823 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 HOXB7P09629 217 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 HOXC9P31274 260 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 AMPHP49418 695 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 PTCRAQ6ISU1 281 aaPredicted RBP9.23□□□□□ -0.93
COL17A1-204ENST00000433822 TRIM46Q7Z4K8 759 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 SIRT2Q8IXJ6 389 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 ZSCAN1Q8NBB4 408 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 SYMPKQ92797 1274 aaKnown RBP9.23□□□□□ -0.93
COL17A1-204ENST00000433822 C8orf37Q96NL8 207 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 QTRT2Q9H974 415 aaKnown RBP9.23□□□□□ -0.93
COL17A1-204ENST00000433822 MAP3K5Q99683 1374 aa9.23□□□□□ -0.93
COL17A1-204ENST00000433822 LTN1O94822 1766 aa9.22□□□□□ -0.93
COL17A1-204ENST00000433822 HMMRO75330 724 aa9.22□□□□□ -0.93
COL17A1-204ENST00000433822 BMP1P13497 986 aa9.22□□□□□ -0.93
COL17A1-204ENST00000433822 MTHFSDQ2M296 383 aaKnown RBP9.22□□□□□ -0.93
COL17A1-204ENST00000433822 KCNH5Q8NCM2 988 aa9.22□□□□□ -0.93
COL17A1-204ENST00000433822 KIF1AQ12756 1690 aa9.22□□□□□ -0.93
COL17A1-204ENST00000433822 LMO7Q8WWI1 1683 aa9.22□□□□□ -0.93
COL17A1-204ENST00000433822 CEMIPQ8WUJ3 1361 aa9.22□□□□□ -0.93
COL17A1-204ENST00000433822 IBTKQ9P2D0 1353 aaPredicted RBP9.22□□□□□ -0.93
COL17A1-204ENST00000433822 GNAT3A8MTJ3 354 aa9.21□□□□□ -0.94
COL17A1-204ENST00000433822 CDC45O75419 566 aa9.21□□□□□ -0.94
COL17A1-204ENST00000433822 CEP85Q6P2H3 762 aa9.21□□□□□ -0.94
COL17A1-204ENST00000433822 NUTM1Q86Y26 1132 aa9.21□□□□□ -0.94
COL17A1-204ENST00000433822 IP6K1Q92551 441 aa9.21□□□□□ -0.94
COL17A1-204ENST00000433822 LNPKQ9C0E8 428 aa9.21□□□□□ -0.94
COL17A1-204ENST00000433822 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.94
COL17A1-204ENST00000433822 CHMP5Q9NZZ3 219 aa9.21□□□□□ -0.94
COL17A1-204ENST00000433822 TSPYL4Q9UJ04 414 aa9.21□□□□□ -0.94
COL17A1-204ENST00000433822 EPB41L2O43491 1005 aaKnown RBP9.2□□□□□ -0.94
COL17A1-204ENST00000433822 CLCN1P35523 988 aa9.2□□□□□ -0.94
COL17A1-204ENST00000433822 DCTN1Q14203 1278 aa9.2□□□□□ -0.94
COL17A1-204ENST00000433822 ANKRD45Q5TZF3 282 aa9.2□□□□□ -0.94
COL17A1-204ENST00000433822 CCDC30Q5VVM6 783 aa9.2□□□□□ -0.94
COL17A1-204ENST00000433822 GPCPD1Q9NPB8 672 aa9.2□□□□□ -0.94
COL17A1-204ENST00000433822 ADAMTS7Q9UKP4 1686 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms