RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.33
NEFM-202ENST00000433454 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
NEFM-202ENST00000433454 SRP68Q9UHB9 627 aaKnown RBP12.96□□□□□ -0.33
NEFM-202ENST00000433454 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
NEFM-202ENST00000433454 EYA2O00167 538 aa12.96□□□□□ -0.34
NEFM-202ENST00000433454 ERC2O15083 957 aa12.96□□□□□ -0.34
NEFM-202ENST00000433454 PHF14O94880 888 aa12.96□□□□□ -0.34
NEFM-202ENST00000433454 RFC4P35249 363 aa12.96□□□□□ -0.34
NEFM-202ENST00000433454 TXNRD1Q16881 649 aa12.96□□□□□ -0.34
NEFM-202ENST00000433454 TAF7LQ5H9L4 462 aa12.96□□□□□ -0.34
NEFM-202ENST00000433454 EAF2Q96CJ1 260 aaPredicted RBP12.96□□□□□ -0.34
NEFM-202ENST00000433454 CCDC85AQ96PX6 553 aaPredicted RBP12.96□□□□□ -0.34
NEFM-202ENST00000433454 COL24A1Q17RW2 1714 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 PLSCR1O15162 318 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 TFCP2Q12800 502 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 CASC1Q6TDU7 716 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 PI4K2BQ8TCG2 481 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 ZNF594Q96JF6 807 aaPredicted RBP12.95□□□□□ -0.34
NEFM-202ENST00000433454 GREM2Q9H772 168 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 ECHDC1Q9NTX5 307 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 TNS1Q9HBL0 1735 aaKnown RBP12.95□□□□□ -0.34
NEFM-202ENST00000433454 EIF5BO60841 1220 aaKnown RBP12.95□□□□□ -0.34
NEFM-202ENST00000433454 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
NEFM-202ENST00000433454 ITGA6P23229 1130 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 TNNI3KQ59H18 835 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 TBC1D9BQ66K14 1250 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.95□□□□□ -0.34
NEFM-202ENST00000433454 FPGT-TNNI3KV9GXZ4 949 aa12.95□□□□□ -0.34
NEFM-202ENST00000433454 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
NEFM-202ENST00000433454 APBA3O96018 575 aa12.94□□□□□ -0.34
NEFM-202ENST00000433454 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
NEFM-202ENST00000433454 MFAP1P55081 439 aaKnown RBP12.94□□□□□ -0.34
NEFM-202ENST00000433454 SETDB2Q96T68 719 aa12.94□□□□□ -0.34
NEFM-202ENST00000433454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.94□□□□□ -0.34
NEFM-202ENST00000433454 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
NEFM-202ENST00000433454 BICDL1Q6ZP65 573 aa12.94□□□□□ -0.34
NEFM-202ENST00000433454 RGPD3A6NKT7 1758 aaPredicted RBP12.93□□□□□ -0.34
NEFM-202ENST00000433454 RGPD4Q7Z3J3 1758 aa12.93□□□□□ -0.34
NEFM-202ENST00000433454 AK9Q5TCS8 1911 aa12.93□□□□□ -0.34
NEFM-202ENST00000433454 SSFA2P28290 1259 aa12.93□□□□□ -0.34
NEFM-202ENST00000433454 LRRC24Q50LG9 513 aa12.93□□□□□ -0.34
NEFM-202ENST00000433454 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
NEFM-202ENST00000433454 CCDC8Q9H0W5 538 aaPredicted RBP12.93□□□□□ -0.34
NEFM-202ENST00000433454 LRP5O75197 1615 aa12.93□□□□□ -0.34
NEFM-202ENST00000433454 CCDC152Q4G0S7 254 aa12.93□□□□□ -0.34
NEFM-202ENST00000433454 PROM2Q8N271 834 aa12.93□□□□□ -0.34
NEFM-202ENST00000433454 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
NEFM-202ENST00000433454 TLR7Q9NYK1 1049 aaKnown RBP12.93□□□□□ -0.34
NEFM-202ENST00000433454 RILPL2Q969X0 211 aa12.92□□□□□ -0.34
NEFM-202ENST00000433454 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
NEFM-202ENST00000433454 RTL9Q8NET4 1388 aa12.92□□□□□ -0.34
NEFM-202ENST00000433454 ZNF609O15014 1411 aa12.92□□□□□ -0.34
NEFM-202ENST00000433454 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
NEFM-202ENST00000433454 CNTROBQ8N137 903 aa12.92□□□□□ -0.34
NEFM-202ENST00000433454 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
NEFM-202ENST00000433454 LDHAL6AQ6ZMR3 332 aa12.91□□□□□ -0.34
NEFM-202ENST00000433454 NBPF5PQ86XG9 351 aaPredicted RBP12.91□□□□□ -0.34
NEFM-202ENST00000433454 CEP126Q9P2H0 1117 aa12.91□□□□□ -0.34
NEFM-202ENST00000433454 DBNLQ9UJU6 430 aaKnown RBP12.91□□□□□ -0.34
NEFM-202ENST00000433454 CARMIL3Q8ND23 1372 aa12.91□□□□□ -0.34
NEFM-202ENST00000433454 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
NEFM-202ENST00000433454 CNNM1Q9NRU3 951 aa12.91□□□□□ -0.34
NEFM-202ENST00000433454 RIC1Q4ADV7 1423 aa12.9□□□□□ -0.34
NEFM-202ENST00000433454 TPTE2Q6XPS3 522 aa12.9□□□□□ -0.34
NEFM-202ENST00000433454 C22orf23Q9BZE7 217 aa12.9□□□□□ -0.34
NEFM-202ENST00000433454 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
NEFM-202ENST00000433454 ABCC12Q96J65 1359 aa12.9□□□□□ -0.35
NEFM-202ENST00000433454 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
NEFM-202ENST00000433454 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
NEFM-202ENST00000433454 DBNDD2Q9BQY9 259 aa12.89□□□□□ -0.35
NEFM-202ENST00000433454 RIPOR2Q9Y4F9 1068 aa12.89□□□□□ -0.35
NEFM-202ENST00000433454 METTL24Q5JXM2 366 aa12.89□□□□□ -0.35
NEFM-202ENST00000433454 SLC10A5Q5PT55 438 aa12.89□□□□□ -0.35
NEFM-202ENST00000433454 DDRGK1Q96HY6 314 aa12.89□□□□□ -0.35
NEFM-202ENST00000433454 NEUROD6Q96NK8 337 aa12.89□□□□□ -0.35
NEFM-202ENST00000433454 A0A1B0GUL7 405 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 NPHP1O15259 732 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 ATP5JP18859 108 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 NFIXQ14938 502 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 IPO9Q96P70 1041 aaKnown RBP12.88□□□□□ -0.35
NEFM-202ENST00000433454 MPHOSPH8Q99549 860 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 TFCP2L1Q9NZI6 479 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 REC8O95072 547 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 GYS1P13807 737 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 CHMLP26374 656 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 SF3B3Q15393 1217 aaKnown RBP12.88□□□□□ -0.35
NEFM-202ENST00000433454 EVI5LQ96CN4 794 aa12.88□□□□□ -0.35
NEFM-202ENST00000433454 CDC5LQ99459 802 aaKnown RBP12.88□□□□□ -0.35
NEFM-202ENST00000433454 SPEF2Q9C093 1822 aa12.87□□□□□ -0.35
NEFM-202ENST00000433454 MROH5Q6ZUA9 1318 aa12.87□□□□□ -0.35
NEFM-202ENST00000433454 IGHMBP2P38935 993 aaKnown RBP12.87□□□□□ -0.35
NEFM-202ENST00000433454 TIMM10P62072 90 aa12.87□□□□□ -0.35
NEFM-202ENST00000433454 ZNF827Q17R98 1081 aa12.87□□□□□ -0.35
NEFM-202ENST00000433454 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
NEFM-202ENST00000433454 BOLA2Q9H3K6 86 aa12.87□□□□□ -0.35
NEFM-202ENST00000433454 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
NEFM-202ENST00000433454 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
NEFM-202ENST00000433454 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
NEFM-202ENST00000433454 VGLL2Q8N8G2 317 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms