RNA–Protein interactions for RNA: ENST00000433028.6

CHEK2-213, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-213ENST00000433028 DUOX1Q9NRD9 1551 aa17.28■□□□□ 0.36
CHEK2-213ENST00000433028 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
CHEK2-213ENST00000433028 SF3B3Q15393 1217 aaKnown RBP17.27■□□□□ 0.36
CHEK2-213ENST00000433028 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.36
CHEK2-213ENST00000433028 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
CHEK2-213ENST00000433028 TRPM7Q96QT4 1865 aa17.27■□□□□ 0.35
CHEK2-213ENST00000433028 ATP5J2-PTCD1G3V325 749 aa17.26■□□□□ 0.35
CHEK2-213ENST00000433028 KIAA2012Q0VF49 1180 aa17.26■□□□□ 0.35
CHEK2-213ENST00000433028 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
CHEK2-213ENST00000433028 MPNDQ8N594 471 aa17.26■□□□□ 0.35
CHEK2-213ENST00000433028 FAM89AQ96GI7 184 aa17.26■□□□□ 0.35
CHEK2-213ENST00000433028 ZNRF3Q9ULT6 936 aa17.26■□□□□ 0.35
CHEK2-213ENST00000433028 CNTNAP1P78357 1384 aa17.26■□□□□ 0.35
CHEK2-213ENST00000433028 TMEM88BA6NKF7 163 aa17.25■□□□□ 0.35
CHEK2-213ENST00000433028 EPS15P42566 896 aa17.25■□□□□ 0.35
CHEK2-213ENST00000433028 MAP1SQ66K74 1059 aaPredicted RBP17.25■□□□□ 0.35
CHEK2-213ENST00000433028 MKRN1Q9UHC7 482 aaKnown RBP17.25■□□□□ 0.35
CHEK2-213ENST00000433028 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
CHEK2-213ENST00000433028 HSPA1AP0DMV8 641 aaKnown RBP17.24■□□□□ 0.35
CHEK2-213ENST00000433028 HSPA1BP0DMV9 641 aaKnown RBP17.24■□□□□ 0.35
CHEK2-213ENST00000433028 CXCL9Q07325 125 aa17.24■□□□□ 0.35
CHEK2-213ENST00000433028 GOLGA2Q08379 1002 aa17.24■□□□□ 0.35
CHEK2-213ENST00000433028 ZNF428Q96B54 188 aa17.24■□□□□ 0.35
CHEK2-213ENST00000433028 CHMP4AQ9BY43 222 aa17.24■□□□□ 0.35
CHEK2-213ENST00000433028 PHAXQ9H814 394 aaKnown RBP17.24■□□□□ 0.35
CHEK2-213ENST00000433028 COL4A1P02462 1669 aa17.24■□□□□ 0.35
CHEK2-213ENST00000433028 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
CHEK2-213ENST00000433028 COL13A1Q5TAT6 717 aaPredicted RBP17.23■□□□□ 0.35
CHEK2-213ENST00000433028 USP50Q70EL3 339 aaPredicted RBP17.23■□□□□ 0.35
CHEK2-213ENST00000433028 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
CHEK2-213ENST00000433028 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
CHEK2-213ENST00000433028 GPRC5DQ9NZD1 345 aa17.23■□□□□ 0.35
CHEK2-213ENST00000433028 CACNA1FO60840 1977 aa17.23■□□□□ 0.35
CHEK2-213ENST00000433028 CCDC27Q2M243 656 aa17.22■□□□□ 0.35
CHEK2-213ENST00000433028 ZBTB38Q8NAP3 1195 aaPredicted RBP17.22■□□□□ 0.35
CHEK2-213ENST00000433028 CELF1Q92879 486 aaKnown RBP17.22■□□□□ 0.35
CHEK2-213ENST00000433028 CDHR2Q9BYE9 1310 aa17.22■□□□□ 0.35
CHEK2-213ENST00000433028 MYH3P11055 1940 aa17.22■□□□□ 0.35
CHEK2-213ENST00000433028 IRS4O14654 1257 aaPredicted RBP17.21■□□□□ 0.35
CHEK2-213ENST00000433028 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
CHEK2-213ENST00000433028 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
CHEK2-213ENST00000433028 HSP90B1P14625 803 aaKnown RBP17.21■□□□□ 0.34
CHEK2-213ENST00000433028 CIAPIN1Q6FI81 312 aa17.21■□□□□ 0.34
CHEK2-213ENST00000433028 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.34
CHEK2-213ENST00000433028 ADARB2Q9NS39 739 aaKnown RBP17.21■□□□□ 0.34
CHEK2-213ENST00000433028 RASSF10A6NK89 507 aa17.2■□□□□ 0.34
CHEK2-213ENST00000433028 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
CHEK2-213ENST00000433028 TSPYL6Q8N831 410 aa17.2■□□□□ 0.34
CHEK2-213ENST00000433028 MYD88Q99836 296 aa17.2■□□□□ 0.34
CHEK2-213ENST00000433028 YDJCA8MPS7 323 aa17.19■□□□□ 0.34
CHEK2-213ENST00000433028 DDX58O95786 925 aaKnown RBP17.19■□□□□ 0.34
CHEK2-213ENST00000433028 PCCAP05165 728 aaPredicted RBP17.19■□□□□ 0.34
CHEK2-213ENST00000433028 VEGFBP49765 207 aa17.19■□□□□ 0.34
CHEK2-213ENST00000433028 GMPSP49915 693 aaPredicted RBP17.19■□□□□ 0.34
CHEK2-213ENST00000433028 RPS8P62241 208 aaKnown RBP17.19■□□□□ 0.34
CHEK2-213ENST00000433028 TNIP1Q15025 636 aa17.19■□□□□ 0.34
CHEK2-213ENST00000433028 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
CHEK2-213ENST00000433028 METTL22Q9BUU2 404 aaPredicted RBP17.19■□□□□ 0.34
CHEK2-213ENST00000433028 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
CHEK2-213ENST00000433028 RAD17O75943 681 aa17.18■□□□□ 0.34
CHEK2-213ENST00000433028 ZEB1P37275 1124 aaPredicted RBP17.18■□□□□ 0.34
CHEK2-213ENST00000433028 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
CHEK2-213ENST00000433028 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
CHEK2-213ENST00000433028 SCN9AQ15858 1988 aa17.17■□□□□ 0.34
CHEK2-213ENST00000433028 IL16Q14005 1332 aa17.17■□□□□ 0.34
CHEK2-213ENST00000433028 GPSM2P81274 684 aa17.17■□□□□ 0.34
CHEK2-213ENST00000433028 DEFB115Q30KQ5 88 aa17.17■□□□□ 0.34
CHEK2-213ENST00000433028 TSR2Q969E8 191 aaKnown RBP17.17■□□□□ 0.34
CHEK2-213ENST00000433028 POLLQ9UGP5 575 aa17.17■□□□□ 0.34
CHEK2-213ENST00000433028 PGAP2Q9UHJ9 254 aa17.17■□□□□ 0.34
CHEK2-213ENST00000433028 POLR2AP24928 1970 aaKnown RBP17.16■□□□□ 0.34
CHEK2-213ENST00000433028 PSME4Q14997 1843 aa17.16■□□□□ 0.34
CHEK2-213ENST00000433028 PDE8AO60658 829 aa17.16■□□□□ 0.34
CHEK2-213ENST00000433028 KSR2Q6VAB6 950 aa17.16■□□□□ 0.34
CHEK2-213ENST00000433028 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
CHEK2-213ENST00000433028 PODXL2Q9NZ53 605 aa17.16■□□□□ 0.34
CHEK2-213ENST00000433028 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
CHEK2-213ENST00000433028 THSD7BQ9C0I4 1608 aa17.15■□□□□ 0.34
CHEK2-213ENST00000433028 FMR1Q06787 632 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHEK2-213ENST00000433028 CCDC152Q4G0S7 254 aa17.15■□□□□ 0.34
CHEK2-213ENST00000433028 TBC1D16Q8TBP0 767 aa17.15■□□□□ 0.34
CHEK2-213ENST00000433028 ZC3H15Q8WU90 426 aaKnown RBP17.15■□□□□ 0.34
CHEK2-213ENST00000433028 EYA3Q99504 573 aa17.15■□□□□ 0.34
CHEK2-213ENST00000433028 STK31Q9BXU1 1019 aa17.15■□□□□ 0.34
CHEK2-213ENST00000433028 SEC31BQ9NQW1 1179 aa17.15■□□□□ 0.34
CHEK2-213ENST00000433028 ABT1Q9ULW3 272 aaKnown RBP17.15■□□□□ 0.34
CHEK2-213ENST00000433028 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
CHEK2-213ENST00000433028 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
CHEK2-213ENST00000433028 TRAF5O00463 557 aa17.14■□□□□ 0.33
CHEK2-213ENST00000433028 TWISTNBQ3B726 338 aaPredicted RBP17.14■□□□□ 0.33
CHEK2-213ENST00000433028 CST9Q5W186 159 aa17.14■□□□□ 0.33
CHEK2-213ENST00000433028 TNS4Q8IZW8 715 aa17.14■□□□□ 0.33
CHEK2-213ENST00000433028 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
CHEK2-213ENST00000433028 DPF2Q92785 391 aa17.14■□□□□ 0.33
CHEK2-213ENST00000433028 DBNDD1Q9H9R9 158 aa17.14■□□□□ 0.33
CHEK2-213ENST00000433028 CNOT7Q9UIV1 285 aaKnown RBP17.14■□□□□ 0.33
CHEK2-213ENST00000433028 SPEF2Q9C093 1822 aa17.14■□□□□ 0.33
CHEK2-213ENST00000433028 PSMD14O00487 310 aa17.13■□□□□ 0.33
CHEK2-213ENST00000433028 FOXN1O15353 648 aa17.13■□□□□ 0.33
CHEK2-213ENST00000433028 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms