RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 NEUROD2Q15784 382 aa19.43■□□□□ 0.7
PRKDC-203ENST00000432581 CIAPIN1Q6FI81 312 aa19.43■□□□□ 0.7
PRKDC-203ENST00000432581 TRAF5O00463 557 aa19.42■□□□□ 0.7
PRKDC-203ENST00000432581 HSPA8P11142 646 aaKnown RBP19.42■□□□□ 0.7
PRKDC-203ENST00000432581 GMPSP49915 693 aaPredicted RBP19.42■□□□□ 0.7
PRKDC-203ENST00000432581 FMR1Q06787 632 aaKnown RBP eCLIP19.42■□□□□ 0.72e-14■■■■■ 41.7
PRKDC-203ENST00000432581 PAXIP1Q6ZW49 1069 aaPredicted RBP19.42■□□□□ 0.7
PRKDC-203ENST00000432581 RUNDC1Q96C34 613 aa19.42■□□□□ 0.7
PRKDC-203ENST00000432581 CAPNS2Q96L46 248 aa19.42■□□□□ 0.7
PRKDC-203ENST00000432581 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
PRKDC-203ENST00000432581 KRT24Q2M2I5 525 aa19.41■□□□□ 0.7
PRKDC-203ENST00000432581 HDGFL1Q5TGJ6 251 aa19.41■□□□□ 0.7
PRKDC-203ENST00000432581 CST9Q5W186 159 aa19.41■□□□□ 0.7
PRKDC-203ENST00000432581 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
PRKDC-203ENST00000432581 PLBD2Q8NHP8 589 aa19.41■□□□□ 0.7
PRKDC-203ENST00000432581 BCL2L13Q9BXK5 485 aa19.41■□□□□ 0.7
PRKDC-203ENST00000432581 LAS1LQ9Y4W2 734 aaKnown RBP19.41■□□□□ 0.7
PRKDC-203ENST00000432581 TLL2Q9Y6L7 1015 aa19.41■□□□□ 0.7
PRKDC-203ENST00000432581 WDR43Q15061 677 aaKnown RBP eCLIP19.4■□□□□ 0.7
PRKDC-203ENST00000432581 ZC3H15Q8WU90 426 aaKnown RBP19.4■□□□□ 0.7
PRKDC-203ENST00000432581 BEGAINQ9BUH8 593 aa19.4■□□□□ 0.7
PRKDC-203ENST00000432581 TRIM35Q9UPQ4 493 aa19.4■□□□□ 0.7
PRKDC-203ENST00000432581 RAD17O75943 681 aa19.39■□□□□ 0.69
PRKDC-203ENST00000432581 CYP4F22Q6NT55 531 aa19.39■□□□□ 0.69
PRKDC-203ENST00000432581 ANKRD13DQ6ZTN6 518 aa19.39■□□□□ 0.69
PRKDC-203ENST00000432581 GPR101Q96P66 508 aaPredicted RBP19.39■□□□□ 0.69
PRKDC-203ENST00000432581 DBF4Q9UBU7 674 aaPredicted RBP19.39■□□□□ 0.69
PRKDC-203ENST00000432581 PGAP2Q9UHJ9 254 aa19.39■□□□□ 0.69
PRKDC-203ENST00000432581 ANKRD36CQ5JPF3 1778 aa19.38■□□□□ 0.69
PRKDC-203ENST00000432581 ISCA1Q9BUE6 129 aa19.38■□□□□ 0.69
PRKDC-203ENST00000432581 CELF2O95319 508 aaKnown RBP19.37■□□□□ 0.69
PRKDC-203ENST00000432581 MAP2K2P36507 400 aa19.37■□□□□ 0.69
PRKDC-203ENST00000432581 GRM1Q13255 1194 aa19.37■□□□□ 0.69
PRKDC-203ENST00000432581 SF3B3Q15393 1217 aaKnown RBP19.37■□□□□ 0.69
PRKDC-203ENST00000432581 HYPKQ9NX55 129 aa19.37■□□□□ 0.69
PRKDC-203ENST00000432581 THSD7BQ9C0I4 1608 aa19.36■□□□□ 0.69
PRKDC-203ENST00000432581 H7C1D1 291 aa19.36■□□□□ 0.69
PRKDC-203ENST00000432581 DDX10Q13206 875 aaKnown RBP19.36■□□□□ 0.69
PRKDC-203ENST00000432581 SAPCD2Q86UD0 394 aa19.36■□□□□ 0.69
PRKDC-203ENST00000432581 FAM89AQ96GI7 184 aa19.36■□□□□ 0.69
PRKDC-203ENST00000432581 HHIPL1Q96JK4 782 aa19.36■□□□□ 0.69
PRKDC-203ENST00000432581 CFAP44Q96MT7 982 aa19.36■□□□□ 0.69
PRKDC-203ENST00000432581 GLIS2Q9BZE0 524 aaPredicted RBP19.36■□□□□ 0.69
PRKDC-203ENST00000432581 CNOT7Q9UIV1 285 aaKnown RBP19.36■□□□□ 0.69
PRKDC-203ENST00000432581 YDJCA8MPS7 323 aa19.35■□□□□ 0.69
PRKDC-203ENST00000432581 TRIM28Q13263 835 aaKnown RBP19.35■□□□□ 0.69
PRKDC-203ENST00000432581 WASHC4Q2M389 1173 aa19.35■□□□□ 0.69
PRKDC-203ENST00000432581 CDC37L1Q7L3B6 337 aa19.35■□□□□ 0.69
PRKDC-203ENST00000432581 LAMB2P55268 1798 aa19.34■□□□□ 0.69
PRKDC-203ENST00000432581 ATP5J2-PTCD1G3V325 749 aa19.34■□□□□ 0.69
PRKDC-203ENST00000432581 HIRAP54198 1017 aaPredicted RBP19.34■□□□□ 0.69
PRKDC-203ENST00000432581 DUSP27Q5VZP5 1158 aa19.34■□□□□ 0.69
PRKDC-203ENST00000432581 TRPM4Q8TD43 1214 aa19.34■□□□□ 0.69
PRKDC-203ENST00000432581 DPF2Q92785 391 aa19.34■□□□□ 0.69
PRKDC-203ENST00000432581 NSFL1CQ9UNZ2 370 aaKnown RBP19.34■□□□□ 0.69
PRKDC-203ENST00000432581 ADAMTS8Q9UP79 889 aa19.34■□□□□ 0.69
PRKDC-203ENST00000432581 DUOX1Q9NRD9 1551 aa19.34■□□□□ 0.69
PRKDC-203ENST00000432581 MICALL2Q8IY33 904 aa19.33■□□□□ 0.68
PRKDC-203ENST00000432581 CELF1Q92879 486 aaKnown RBP19.33■□□□□ 0.68
PRKDC-203ENST00000432581 ZNF428Q96B54 188 aa19.33■□□□□ 0.68
PRKDC-203ENST00000432581 CA12O43570 354 aa19.32■□□□□ 0.68
PRKDC-203ENST00000432581 HSP90B1P14625 803 aaKnown RBP19.32■□□□□ 0.68
PRKDC-203ENST00000432581 ABHD8Q96I13 439 aa19.32■□□□□ 0.68
PRKDC-203ENST00000432581 EYA3Q99504 573 aa19.32■□□□□ 0.68
PRKDC-203ENST00000432581 TRPM7Q96QT4 1865 aa19.32■□□□□ 0.68
PRKDC-203ENST00000432581 LRRC37AA6NMS7 1700 aa19.31■□□□□ 0.68
PRKDC-203ENST00000432581 C6orf229H3BNL8 230 aa19.31■□□□□ 0.68
PRKDC-203ENST00000432581 PSMD14O00487 310 aa19.31■□□□□ 0.68
PRKDC-203ENST00000432581 IRS4O14654 1257 aaPredicted RBP19.31■□□□□ 0.68
PRKDC-203ENST00000432581 AOC2O75106 756 aa19.31■□□□□ 0.68
PRKDC-203ENST00000432581 RPS12P25398 132 aaKnown RBP19.31■□□□□ 0.68
PRKDC-203ENST00000432581 GOLGA2Q08379 1002 aa19.31■□□□□ 0.68
PRKDC-203ENST00000432581 ZNF408Q9H9D4 720 aa19.31■□□□□ 0.68
PRKDC-203ENST00000432581 DBNDD1Q9H9R9 158 aa19.31■□□□□ 0.68
PRKDC-203ENST00000432581 MBIPQ9NS73 344 aa19.31■□□□□ 0.68
PRKDC-203ENST00000432581 RPS8P62241 208 aaKnown RBP19.3■□□□□ 0.68
PRKDC-203ENST00000432581 GPSM2P81274 684 aa19.3■□□□□ 0.68
PRKDC-203ENST00000432581 RTL5Q5HYW3 569 aaPredicted RBP19.3■□□□□ 0.68
PRKDC-203ENST00000432581 RIC3Q7Z5B4 369 aa19.3■□□□□ 0.68
PRKDC-203ENST00000432581 ZBTB38Q8NAP3 1195 aaPredicted RBP19.3■□□□□ 0.68
PRKDC-203ENST00000432581 POLLQ9UGP5 575 aa19.3■□□□□ 0.68
PRKDC-203ENST00000432581 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
PRKDC-203ENST00000432581 SHTN1A0MZ66 631 aa19.29■□□□□ 0.68
PRKDC-203ENST00000432581 RIMBP2O15034 1052 aa19.29■□□□□ 0.68
PRKDC-203ENST00000432581 ECE2O60344 883 aa19.29■□□□□ 0.68
PRKDC-203ENST00000432581 ZNF853P0CG23 659 aa19.29■□□□□ 0.68
PRKDC-203ENST00000432581 BRPF1P55201 1214 aaPredicted RBP19.29■□□□□ 0.68
PRKDC-203ENST00000432581 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
PRKDC-203ENST00000432581 DDX60Q8IY21 1712 aaKnown RBP19.28■□□□□ 0.68
PRKDC-203ENST00000432581 USP48Q86UV5 1035 aa19.28■□□□□ 0.68
PRKDC-203ENST00000432581 IFT57Q9NWB7 429 aa19.28■□□□□ 0.68
PRKDC-203ENST00000432581 GNAI1P63096 354 aa19.27■□□□□ 0.68
PRKDC-203ENST00000432581 NOGQ13253 232 aa19.27■□□□□ 0.68
PRKDC-203ENST00000432581 SAMD7Q7Z3H4 446 aa19.27■□□□□ 0.68
PRKDC-203ENST00000432581 TBC1D16Q8TBP0 767 aa19.27■□□□□ 0.68
PRKDC-203ENST00000432581 CHMP4AQ9BY43 222 aa19.27■□□□□ 0.68
PRKDC-203ENST00000432581 ZC3H12CQ9C0D7 883 aaKnown RBP19.27■□□□□ 0.68
PRKDC-203ENST00000432581 PODXL2Q9NZ53 605 aa19.27■□□□□ 0.68
PRKDC-203ENST00000432581 DOK7Q18PE1 504 aa19.26■□□□□ 0.67
PRKDC-203ENST00000432581 TBC1D10BQ4KMP7 808 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms