RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 SKAP1Q86WV1 359 aa16.93■□□□□ 0.3
RTN1-204ENST00000432103 STK32BQ9NY57 414 aa16.93■□□□□ 0.3
RTN1-204ENST00000432103 PA2G4Q9UQ80 394 aaKnown RBP16.93■□□□□ 0.3
RTN1-204ENST00000432103 SMARCA5O60264 1052 aaPredicted RBP16.92■□□□□ 0.3
RTN1-204ENST00000432103 IL15P40933 162 aaPredicted RBP16.92■□□□□ 0.3
RTN1-204ENST00000432103 EN1Q05925 392 aaPredicted RBP16.92■□□□□ 0.3
RTN1-204ENST00000432103 SLC10A5Q5PT55 438 aa16.92■□□□□ 0.3
RTN1-204ENST00000432103 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
RTN1-204ENST00000432103 GYS1P13807 737 aa16.91■□□□□ 0.3
RTN1-204ENST00000432103 FAM161AQ3B820 660 aa16.91■□□□□ 0.3
RTN1-204ENST00000432103 NLGN1Q8N2Q7 840 aa16.91■□□□□ 0.3
RTN1-204ENST00000432103 GPATCH3Q96I76 525 aa16.91■□□□□ 0.3
RTN1-204ENST00000432103 EZH2Q15910 746 aaKnown RBP16.91■□□□□ 0.3
RTN1-204ENST00000432103 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
RTN1-204ENST00000432103 SIL1Q9H173 461 aa16.91■□□□□ 0.3
RTN1-204ENST00000432103 OSBPL3Q9H4L5 887 aa16.91■□□□□ 0.3
RTN1-204ENST00000432103 RTL9Q8NET4 1388 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 ITGA6P23229 1130 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 ZNF827Q17R98 1081 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 PLEKHM2Q8IWE5 1019 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 AOX1Q06278 1338 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 EYA2O00167 538 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 IFIT2P09913 472 aaKnown RBP16.9■□□□□ 0.3
RTN1-204ENST00000432103 MX1P20591 662 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 SYNE4Q8N205 404 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 NLRP3Q96P20 1036 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 IL1RAPL2Q9NP60 686 aa16.9■□□□□ 0.3
RTN1-204ENST00000432103 LAMB2P55268 1798 aa16.89■□□□□ 0.29
RTN1-204ENST00000432103 EIF5BO60841 1220 aaKnown RBP16.89■□□□□ 0.29
RTN1-204ENST00000432103 HCLS1P14317 486 aaPredicted RBP16.89■□□□□ 0.29
RTN1-204ENST00000432103 NFIXQ14938 502 aa16.89■□□□□ 0.29
RTN1-204ENST00000432103 ERFEQ4G0M1 354 aa16.89■□□□□ 0.29
RTN1-204ENST00000432103 NUTM1Q86Y26 1132 aa16.89■□□□□ 0.29
RTN1-204ENST00000432103 MYH3P11055 1940 aa16.89■□□□□ 0.29
RTN1-204ENST00000432103 EP400Q96L91 3159 aa16.89■□□□□ 0.29
RTN1-204ENST00000432103 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
RTN1-204ENST00000432103 CNBD1Q8NA66 436 aa16.88■□□□□ 0.29
RTN1-204ENST00000432103 KLHDC4Q8TBB5 520 aa16.88■□□□□ 0.29
RTN1-204ENST00000432103 SF3B3Q15393 1217 aaKnown RBP16.88■□□□□ 0.29
RTN1-204ENST00000432103 CDC5LQ99459 802 aaKnown RBP16.88■□□□□ 0.29
RTN1-204ENST00000432103 GREM2Q9H772 168 aa16.88■□□□□ 0.29
RTN1-204ENST00000432103 GPR108Q9NPR9 543 aa16.88■□□□□ 0.29
RTN1-204ENST00000432103 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
RTN1-204ENST00000432103 TTC41PQ6P2S7 1318 aa16.88■□□□□ 0.29
RTN1-204ENST00000432103 ERC2O15083 957 aa16.87■□□□□ 0.29
RTN1-204ENST00000432103 SASH1O94885 1247 aa16.87■□□□□ 0.29
RTN1-204ENST00000432103 PDE1AP54750 535 aa16.87■□□□□ 0.29
RTN1-204ENST00000432103 ST5P78524 1137 aa16.87■□□□□ 0.29
RTN1-204ENST00000432103 COL23A1Q86Y22 540 aaPredicted RBP16.87■□□□□ 0.29
RTN1-204ENST00000432103 C16orf71Q8IYS4 520 aaPredicted RBP16.87■□□□□ 0.29
RTN1-204ENST00000432103 TM4SF1P30408 202 aa16.87■□□□□ 0.29
RTN1-204ENST00000432103 IGHMBP2P38935 993 aaKnown RBP16.87■□□□□ 0.29
RTN1-204ENST00000432103 LDHAL6AQ6ZMR3 332 aa16.87■□□□□ 0.29
RTN1-204ENST00000432103 CEP126Q9P2H0 1117 aa16.87■□□□□ 0.29
RTN1-204ENST00000432103 AKAP2Q9Y2D5 859 aa16.87■□□□□ 0.29
RTN1-204ENST00000432103 RIC1Q4ADV7 1423 aa16.86■□□□□ 0.29
RTN1-204ENST00000432103 TTC22Q5TAA0 569 aa16.86■□□□□ 0.29
RTN1-204ENST00000432103 AACSQ86V21 672 aa16.86■□□□□ 0.29
RTN1-204ENST00000432103 CCDC85AQ96PX6 553 aaPredicted RBP16.86■□□□□ 0.29
RTN1-204ENST00000432103 MPHOSPH8Q99549 860 aa16.86■□□□□ 0.29
RTN1-204ENST00000432103 CNNM1Q9NRU3 951 aa16.85■□□□□ 0.29
RTN1-204ENST00000432103 SALL3Q9BXA9 1300 aa16.85■□□□□ 0.29
RTN1-204ENST00000432103 SERPINB2P05120 415 aa16.85■□□□□ 0.29
RTN1-204ENST00000432103 ATG9AQ7Z3C6 839 aa16.85■□□□□ 0.29
RTN1-204ENST00000432103 BACH2Q9BYV9 841 aa16.85■□□□□ 0.29
RTN1-204ENST00000432103 DDX60Q8IY21 1712 aaKnown RBP16.85■□□□□ 0.29
RTN1-204ENST00000432103 PNPLA7Q6ZV29 1317 aa16.85■□□□□ 0.29
RTN1-204ENST00000432103 TFCP2Q12800 502 aa16.84■□□□□ 0.29
RTN1-204ENST00000432103 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
RTN1-204ENST00000432103 MROH5Q6ZUA9 1318 aa16.84■□□□□ 0.29
RTN1-204ENST00000432103 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
RTN1-204ENST00000432103 ECHDC1Q9NTX5 307 aa16.84■□□□□ 0.29
RTN1-204ENST00000432103 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
RTN1-204ENST00000432103 GLRX3O76003 335 aaKnown RBP16.83■□□□□ 0.28
RTN1-204ENST00000432103 CASC1Q6TDU7 716 aa16.83■□□□□ 0.28
RTN1-204ENST00000432103 OTUD7AQ8TE49 926 aaPredicted RBP16.83■□□□□ 0.28
RTN1-204ENST00000432103 QSER1Q2KHR3 1735 aa16.83■□□□□ 0.28
RTN1-204ENST00000432103 LRRC24Q50LG9 513 aa16.82■□□□□ 0.28
RTN1-204ENST00000432103 DEFB132Q7Z7B7 95 aa16.82■□□□□ 0.28
RTN1-204ENST00000432103 ANKRD18AQ8IVF6 992 aa16.82■□□□□ 0.28
RTN1-204ENST00000432103 PARP3Q9Y6F1 533 aa16.82■□□□□ 0.28
RTN1-204ENST00000432103 ABCC12Q96J65 1359 aa16.82■□□□□ 0.28
RTN1-204ENST00000432103 POLRMTO00411 1230 aaKnown RBP16.82■□□□□ 0.28
RTN1-204ENST00000432103 METTL24Q5JXM2 366 aa16.82■□□□□ 0.28
RTN1-204ENST00000432103 EAF2Q96CJ1 260 aaPredicted RBP16.82■□□□□ 0.28
RTN1-204ENST00000432103 RIPOR2Q9Y4F9 1068 aa16.82■□□□□ 0.28
RTN1-204ENST00000432103 C8orf34Q49A92 452 aa16.81■□□□□ 0.28
RTN1-204ENST00000432103 PRR5LQ6MZQ0 368 aa16.81■□□□□ 0.28
RTN1-204ENST00000432103 DDX46Q7L014 1031 aaKnown RBP16.81■□□□□ 0.28
RTN1-204ENST00000432103 NBR1Q14596 966 aa16.8■□□□□ 0.28
RTN1-204ENST00000432103 PUS3Q9BZE2 481 aaKnown RBP16.8■□□□□ 0.28
RTN1-204ENST00000432103 ANO8Q9HCE9 1232 aaPredicted RBP16.8■□□□□ 0.28
RTN1-204ENST00000432103 TUBGCP6Q96RT7 1819 aa16.8■□□□□ 0.28
RTN1-204ENST00000432103 SLC16A10Q8TF71 515 aa16.79■□□□□ 0.28
RTN1-204ENST00000432103 CCDC8Q9H0W5 538 aaPredicted RBP16.79■□□□□ 0.28
RTN1-204ENST00000432103 UPF2Q9HAU5 1272 aaKnown RBP16.79■□□□□ 0.28
RTN1-204ENST00000432103 CDC45O75419 566 aa16.79■□□□□ 0.28
RTN1-204ENST00000432103 GSPT1P15170 499 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms