RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 JDP2Q8WYK2 163 aa10.54□□□□□ -0.72
ECHDC1-207ENST00000430841 FMNL2Q96PY5 1086 aa10.54□□□□□ -0.72
ECHDC1-207ENST00000430841 TAF1DQ9H5J8 278 aaPredicted RBP10.54□□□□□ -0.72
ECHDC1-207ENST00000430841 BCL2L12Q9HB09 334 aa10.54□□□□□ -0.72
ECHDC1-207ENST00000430841 TIMELESSQ9UNS1 1208 aa10.54□□□□□ -0.72
ECHDC1-207ENST00000430841 UBR2Q8IWV8 1755 aa10.54□□□□□ -0.72
ECHDC1-207ENST00000430841 CCDC85CA6NKD9 419 aa10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 POTECB2RU33 542 aa10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 DIAPH1O60610 1272 aaKnown RBP10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 NPR1P16066 1061 aa10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 EPHX2P34913 555 aa10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 IL13P35225 146 aa10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 IL6STP40189 918 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 ECE1P42892 770 aa10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 EIF5P55010 431 aaKnown RBP10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 ERICH6Q7L0X2 663 aa10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 DZIP3Q86Y13 1208 aaKnown RBP10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 GAS2L2Q8NHY3 880 aa10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 ABHD8Q96I13 439 aa10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 TMX4Q9H1E5 349 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-207ENST00000430841 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.72
ECHDC1-207ENST00000430841 U2SURPO15042 1029 aaKnown RBP10.52□□□□□ -0.73
ECHDC1-207ENST00000430841 EIF6P56537 245 aaKnown RBP10.52□□□□□ -0.73
ECHDC1-207ENST00000430841 FKBP4Q02790 459 aaKnown RBP eCLIP10.52□□□□□ -0.73
ECHDC1-207ENST00000430841 MLLT1Q03111 559 aaPredicted RBP10.52□□□□□ -0.73
ECHDC1-207ENST00000430841 RTKN2Q8IZC4 609 aa10.52□□□□□ -0.73
ECHDC1-207ENST00000430841 PASKQ96RG2 1323 aa10.52□□□□□ -0.73
ECHDC1-207ENST00000430841 SLX4Q8IY92 1834 aa10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 GNAT3A8MTJ3 354 aa10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 BHMG1C9JSJ3 638 aaPredicted RBP10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 SRGNP10124 158 aa10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 MTHFSDQ2M296 383 aaKnown RBP10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 ZNF790Q6PG37 636 aa10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 CNTROBQ8N137 903 aa10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 KCNK17Q96T54 332 aa10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 ZNF277Q9NRM2 450 aaPredicted RBP10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 WBP1LQ9NX94 342 aa10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 GJA3Q9Y6H8 435 aa10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 RNF123Q5XPI4 1314 aa10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 WDR33Q9C0J8 1336 aaKnown RBP10.51□□□□□ -0.73
ECHDC1-207ENST00000430841 BCORQ6W2J9 1755 aa10.5□□□□□ -0.73
ECHDC1-207ENST00000430841 ALDH1B1P30837 517 aa10.5□□□□□ -0.73
ECHDC1-207ENST00000430841 MAP1SQ66K74 1059 aaPredicted RBP10.5□□□□□ -0.73
ECHDC1-207ENST00000430841 TPTE2Q6XPS3 522 aa10.5□□□□□ -0.73
ECHDC1-207ENST00000430841 ZNF496Q96IT1 587 aaPredicted RBP10.5□□□□□ -0.73
ECHDC1-207ENST00000430841 RASSF10A6NK89 507 aa10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 FAM177BA6PVY3 158 aa10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 BTBD11A6QL63 1104 aa10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 LCE2BO14633 110 aa10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 HSPA5P11021 654 aaKnown RBP10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 HSPA8P11142 646 aaKnown RBP10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 IARSP41252 1262 aaKnown RBP10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 GPC2Q8N158 579 aa10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 RTF1Q92541 710 aaKnown RBP10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 ZNF541Q9H0D2 1346 aa10.49□□□□□ -0.73
ECHDC1-207ENST00000430841 CNGB1Q14028 1251 aaPredicted RBP10.48□□□□□ -0.73
ECHDC1-207ENST00000430841 PPP4R3BQ5MIZ7 849 aa10.48□□□□□ -0.73
ECHDC1-207ENST00000430841 THSD4Q6ZMP0 1018 aa10.48□□□□□ -0.73
ECHDC1-207ENST00000430841 RPGRQ92834 1020 aaKnown RBP10.48□□□□□ -0.73
ECHDC1-207ENST00000430841 CAPNS2Q96L46 248 aa10.48□□□□□ -0.73
ECHDC1-207ENST00000430841 NIP7Q9Y221 180 aaKnown RBP eCLIP10.48□□□□□ -0.73
ECHDC1-207ENST00000430841 STK25O00506 426 aa10.47□□□□□ -0.73
ECHDC1-207ENST00000430841 CAMTA2O94983 1202 aa10.47□□□□□ -0.73
ECHDC1-207ENST00000430841 A1BGP04217 495 aa10.47□□□□□ -0.73
ECHDC1-207ENST00000430841 CLEC4GQ6UXB4 293 aa10.47□□□□□ -0.73
ECHDC1-207ENST00000430841 CFAP53Q96M91 514 aa10.47□□□□□ -0.73
ECHDC1-207ENST00000430841 NYXQ9GZU5 481 aa10.47□□□□□ -0.73
ECHDC1-207ENST00000430841 CA12O43570 354 aa10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 ITGBL1O95965 494 aaPredicted RBP10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 NEFMP07197 916 aa10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 FOXK1P85037 733 aa10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 CC2D2BQ6DHV5 1058 aa10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 PLPP6Q8IY26 295 aa10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 NIM1KQ8IY84 436 aa10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 SYNE4Q8N205 404 aa10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 LARGE2Q8N3Y3 721 aa10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 GPR101Q96P66 508 aaPredicted RBP10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 DDX21Q9NR30 783 aaKnown RBP eCLIP10.46□□□□□ -0.73
ECHDC1-207ENST00000430841 CLSPNQ9HAW4 1339 aa10.45□□□□□ -0.74
ECHDC1-207ENST00000430841 GRIPAP1Q4V328 841 aa10.45□□□□□ -0.74
ECHDC1-207ENST00000430841 CC2D1BQ5T0F9 858 aaKnown RBP10.45□□□□□ -0.74
ECHDC1-207ENST00000430841 PCGF6Q9BYE7 350 aa10.45□□□□□ -0.74
ECHDC1-207ENST00000430841 SIPA1L3O60292 1781 aaPredicted RBP10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 SNRPA1P09661 255 aaKnown RBP10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 PIP4K2AP48426 406 aaPredicted RBP10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 TRIM26Q12899 539 aaPredicted RBP10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 DSG2Q14126 1118 aa10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 CYP4F22Q6NT55 531 aa10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 KIF6Q6ZMV9 814 aa10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 PSMD1Q99460 953 aa10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 NUDCQ9Y266 331 aa10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 TRPM7Q96QT4 1865 aa10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 ADAMTSL1Q8N6G6 1762 aa10.44□□□□□ -0.74
ECHDC1-207ENST00000430841 FZD9O00144 591 aa10.43□□□□□ -0.74
ECHDC1-207ENST00000430841 USP50Q70EL3 339 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-207ENST00000430841 ZNF408Q9H9D4 720 aa10.43□□□□□ -0.74
ECHDC1-207ENST00000430841 THSD7BQ9C0I4 1608 aa10.43□□□□□ -0.74
ECHDC1-207ENST00000430841 PPIP5K2O43314 1243 aa10.42□□□□□ -0.74
ECHDC1-207ENST00000430841 MAP2K2P36507 400 aa10.42□□□□□ -0.74
ECHDC1-207ENST00000430841 RBM17Q96I25 401 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms