RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 DDX19BQ9UMR2 479 aa22.76■■□□□ 1.23
CDC42EP1-203ENST00000430687 TNRC6CQ9HCJ0 1690 aaKnown RBP22.76■■□□□ 1.23
CDC42EP1-203ENST00000430687 DDX60Q8IY21 1712 aaKnown RBP22.76■■□□□ 1.23
CDC42EP1-203ENST00000430687 KIAA1551Q9HCM1 1747 aa22.76■■□□□ 1.23
CDC42EP1-203ENST00000430687 LAMB2P55268 1798 aa22.76■■□□□ 1.23
CDC42EP1-203ENST00000430687 ZBTB7BO15156 539 aaPredicted RBP22.75■■□□□ 1.23
CDC42EP1-203ENST00000430687 ZNF622Q969S3 477 aaKnown RBP eCLIP22.75■■□□□ 1.23
CDC42EP1-203ENST00000430687 SUCLG2Q96I99 432 aa22.75■■□□□ 1.23
CDC42EP1-203ENST00000430687 CENPBP07199 599 aaPredicted RBP22.74■■□□□ 1.23
CDC42EP1-203ENST00000430687 C20orf194Q5TEA3 1177 aa22.74■■□□□ 1.23
CDC42EP1-203ENST00000430687 DDX46Q7L014 1031 aaKnown RBP22.74■■□□□ 1.23
CDC42EP1-203ENST00000430687 TTLL6Q8N841 843 aa22.74■■□□□ 1.23
CDC42EP1-203ENST00000430687 KAZALD1Q96I82 304 aa22.74■■□□□ 1.23
CDC42EP1-203ENST00000430687 SUPT16HQ9Y5B9 1047 aaKnown RBP22.74■■□□□ 1.23
CDC42EP1-203ENST00000430687 RTL9Q8NET4 1388 aa22.74■■□□□ 1.23
CDC42EP1-203ENST00000430687 RABL6Q3YEC7 729 aaPredicted RBP22.73■■□□□ 1.23
CDC42EP1-203ENST00000430687 COG6Q9Y2V7 657 aa22.73■■□□□ 1.23
CDC42EP1-203ENST00000430687 DALRD3Q5D0E6 543 aaKnown RBP22.72■■□□□ 1.23
CDC42EP1-203ENST00000430687 EPHA10Q5JZY3 1008 aa22.72■■□□□ 1.23
CDC42EP1-203ENST00000430687 BBOX1O75936 387 aa22.71■■□□□ 1.23
CDC42EP1-203ENST00000430687 GNAI2P04899 355 aa22.71■■□□□ 1.23
CDC42EP1-203ENST00000430687 LMBR1LQ6UX01 489 aa22.71■■□□□ 1.23
CDC42EP1-203ENST00000430687 BICC1Q9H694 974 aaKnown RBP22.71■■□□□ 1.23
CDC42EP1-203ENST00000430687 DLEC1Q9Y238 1755 aa22.71■■□□□ 1.23
CDC42EP1-203ENST00000430687 GRAPQ13588 217 aa22.7■■□□□ 1.22
CDC42EP1-203ENST00000430687 GRAPLQ8TC17 118 aaPredicted RBP22.7■■□□□ 1.22
CDC42EP1-203ENST00000430687 COL11A2P13942 1736 aaPredicted RBP22.7■■□□□ 1.22
CDC42EP1-203ENST00000430687 TMC4Q7Z404 712 aa22.69■■□□□ 1.22
CDC42EP1-203ENST00000430687 ANKRD44Q8N8A2 993 aa22.69■■□□□ 1.22
CDC42EP1-203ENST00000430687 CDC5LQ99459 802 aaKnown RBP22.69■■□□□ 1.22
CDC42EP1-203ENST00000430687 GREM2Q9H772 168 aa22.69■■□□□ 1.22
CDC42EP1-203ENST00000430687 LRRFIP2Q9Y608 721 aaKnown RBP22.69■■□□□ 1.22
CDC42EP1-203ENST00000430687 PRPF40BQ6NWY9 871 aaKnown RBP22.68■■□□□ 1.22
CDC42EP1-203ENST00000430687 ANKRD18BA2A2Z9 1011 aa22.67■■□□□ 1.22
CDC42EP1-203ENST00000430687 ITGA6P23229 1130 aa22.67■■□□□ 1.22
CDC42EP1-203ENST00000430687 RPS8P62241 208 aaKnown RBP22.67■■□□□ 1.22
CDC42EP1-203ENST00000430687 IFIT5Q13325 482 aaKnown RBP22.67■■□□□ 1.22
CDC42EP1-203ENST00000430687 CCDC57Q2TAC2 916 aa22.67■■□□□ 1.22
CDC42EP1-203ENST00000430687 CCDC85AQ96PX6 553 aaPredicted RBP22.67■■□□□ 1.22
CDC42EP1-203ENST00000430687 ZBTB40Q9NUA8 1239 aa22.67■■□□□ 1.22
CDC42EP1-203ENST00000430687 BCS1LQ9Y276 419 aa22.67■■□□□ 1.22
CDC42EP1-203ENST00000430687 MTX1Q13505 466 aa22.66■■□□□ 1.22
CDC42EP1-203ENST00000430687 FAM161AQ3B820 660 aa22.66■■□□□ 1.22
CDC42EP1-203ENST00000430687 SEC31BQ9NQW1 1179 aa22.66■■□□□ 1.22
CDC42EP1-203ENST00000430687 CHMP3Q9Y3E7 222 aa22.66■■□□□ 1.22
CDC42EP1-203ENST00000430687 PPEF1O14829 653 aaPredicted RBP22.65■■□□□ 1.22
CDC42EP1-203ENST00000430687 SOGA3Q5TF21 947 aa22.65■■□□□ 1.22
CDC42EP1-203ENST00000430687 CC2D2BQ6DHV5 1058 aa22.65■■□□□ 1.22
CDC42EP1-203ENST00000430687 ANKRD18AQ8IVF6 992 aa22.65■■□□□ 1.22
CDC42EP1-203ENST00000430687 C7orf43Q8WVR3 580 aa22.65■■□□□ 1.22
CDC42EP1-203ENST00000430687 CELF1Q92879 486 aaKnown RBP22.65■■□□□ 1.22
CDC42EP1-203ENST00000430687 SRCAPQ6ZRS2 3230 aa22.65■■□□□ 1.22
CDC42EP1-203ENST00000430687 BRCA1P38398 1863 aaKnown RBP22.64■■□□□ 1.22
CDC42EP1-203ENST00000430687 GRIPAP1Q4V328 841 aa22.64■■□□□ 1.21
CDC42EP1-203ENST00000430687 MYH3P11055 1940 aa22.64■■□□□ 1.21
CDC42EP1-203ENST00000430687 DCAF8L1A6NGE4 600 aa22.63■■□□□ 1.21
CDC42EP1-203ENST00000430687 IGHMBP2P38935 993 aaKnown RBP22.63■■□□□ 1.21
CDC42EP1-203ENST00000430687 GPR162Q16538 588 aa22.63■■□□□ 1.21
CDC42EP1-203ENST00000430687 SP8Q8IXZ3 490 aa22.63■■□□□ 1.21
CDC42EP1-203ENST00000430687 TMX4Q9H1E5 349 aaPredicted RBP22.63■■□□□ 1.21
CDC42EP1-203ENST00000430687 ATP6V0A2Q9Y487 856 aa22.63■■□□□ 1.21
CDC42EP1-203ENST00000430687 GRIN3BO60391 1043 aa22.62■■□□□ 1.21
CDC42EP1-203ENST00000430687 AAMPQ13685 434 aa22.62■■□□□ 1.21
CDC42EP1-203ENST00000430687 BSDC1Q9NW68 430 aaPredicted RBP22.62■■□□□ 1.21
CDC42EP1-203ENST00000430687 C21orf2O43822 256 aa22.61■■□□□ 1.21
CDC42EP1-203ENST00000430687 YBX3P16989 372 aaKnown RBP eCLIP22.61■■□□□ 1.219e-6■■■□□ 18.1
CDC42EP1-203ENST00000430687 PELP1Q8IZL8 1130 aaKnown RBP22.61■■□□□ 1.21
CDC42EP1-203ENST00000430687 WWC3Q9ULE0 1092 aa22.61■■□□□ 1.21
CDC42EP1-203ENST00000430687 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
CDC42EP1-203ENST00000430687 TAF7LQ5H9L4 462 aa22.6■■□□□ 1.21
CDC42EP1-203ENST00000430687 RPAP2Q8IXW5 612 aaPredicted RBP22.6■■□□□ 1.21
CDC42EP1-203ENST00000430687 CRBNQ96SW2 442 aa22.6■■□□□ 1.21
CDC42EP1-203ENST00000430687 MPHOSPH8Q99549 860 aa22.6■■□□□ 1.21
CDC42EP1-203ENST00000430687 SRGAP3O43295 1099 aa22.59■■□□□ 1.21
CDC42EP1-203ENST00000430687 RFX5P48382 616 aaPredicted RBP22.59■■□□□ 1.21
CDC42EP1-203ENST00000430687 CCDC93Q567U6 631 aa22.59■■□□□ 1.21
CDC42EP1-203ENST00000430687 RTKN2Q8IZC4 609 aa22.59■■□□□ 1.21
CDC42EP1-203ENST00000430687 C1orf115Q9H7X2 142 aa22.58■■□□□ 1.21
CDC42EP1-203ENST00000430687 FBXO3Q9UK99 471 aa22.58■■□□□ 1.21
CDC42EP1-203ENST00000430687 SLX4Q8IY92 1834 aa22.58■■□□□ 1.21
CDC42EP1-203ENST00000430687 CEP85Q6P2H3 762 aa22.57■■□□□ 1.2
CDC42EP1-203ENST00000430687 LDHAL6AQ6ZMR3 332 aa22.57■■□□□ 1.2
CDC42EP1-203ENST00000430687 PTPN12Q05209 780 aaKnown RBP22.56■■□□□ 1.2
CDC42EP1-203ENST00000430687 POLA2Q14181 598 aa22.56■■□□□ 1.2
CDC42EP1-203ENST00000430687 SSH3Q8TE77 659 aa22.56■■□□□ 1.2
CDC42EP1-203ENST00000430687 ZNF594Q96JF6 807 aaPredicted RBP22.56■■□□□ 1.2
CDC42EP1-203ENST00000430687 COPRSQ9NQ92 184 aa22.56■■□□□ 1.2
CDC42EP1-203ENST00000430687 ZNF219Q9P2Y4 722 aaPredicted RBP22.56■■□□□ 1.2
CDC42EP1-203ENST00000430687 ARFGEF1Q9Y6D6 1849 aa22.56■■□□□ 1.2
CDC42EP1-203ENST00000430687 PNMA6EA0A0J9YXQ4 647 aa22.55■■□□□ 1.2
CDC42EP1-203ENST00000430687 MINPP1Q9UNW1 487 aa22.55■■□□□ 1.2
CDC42EP1-203ENST00000430687 COL4A1P02462 1669 aa22.55■■□□□ 1.2
CDC42EP1-203ENST00000430687 ARHGAP27Q6ZUM4 889 aa22.54■■□□□ 1.2
CDC42EP1-203ENST00000430687 MPNDQ8N594 471 aa22.54■■□□□ 1.2
CDC42EP1-203ENST00000430687 PSMD1Q99460 953 aa22.54■■□□□ 1.2
CDC42EP1-203ENST00000430687 ANKRD2Q9GZV1 360 aa22.54■■□□□ 1.2
CDC42EP1-203ENST00000430687 CNNM1Q9NRU3 951 aa22.54■■□□□ 1.2
CDC42EP1-203ENST00000430687 PODXL2Q9NZ53 605 aa22.54■■□□□ 1.2
CDC42EP1-203ENST00000430687 SNED1Q8TER0 1413 aa22.54■■□□□ 1.2
CDC42EP1-203ENST00000430687 LTBP3Q9NS15 1303 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms