RNA–Protein interactions for RNA: ENST00000430670.5

HDAC7-210, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-210ENST00000430670 MPNDQ8N594 471 aa21.52■■□□□ 1.04
HDAC7-210ENST00000430670 CDCA7LQ96GN5 454 aa21.52■■□□□ 1.04
HDAC7-210ENST00000430670 HNRNPUQ00839 825 aaKnown RBP eCLIP21.51■■□□□ 1.033e-6■□□□□ 11.1
HDAC7-210ENST00000430670 CDC5LQ99459 802 aaKnown RBP21.51■■□□□ 1.03
HDAC7-210ENST00000430670 SLX4Q8IY92 1834 aa21.5■■□□□ 1.03
HDAC7-210ENST00000430670 MRPL50Q8N5N7 158 aaKnown RBP21.5■■□□□ 1.03
HDAC7-210ENST00000430670 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
HDAC7-210ENST00000430670 ARFGEF2Q9Y6D5 1785 aa21.5■■□□□ 1.03
HDAC7-210ENST00000430670 CACNA1FO60840 1977 aa21.49■■□□□ 1.03
HDAC7-210ENST00000430670 VEGFAP15692 232 aaPredicted RBP21.49■■□□□ 1.03
HDAC7-210ENST00000430670 C1QTNF8P60827 252 aa21.49■■□□□ 1.03
HDAC7-210ENST00000430670 BEND3Q5T5X7 828 aa21.49■■□□□ 1.03
HDAC7-210ENST00000430670 UBE3BQ7Z3V4 1068 aa21.49■■□□□ 1.03
HDAC7-210ENST00000430670 PLA2G12BQ9BX93 195 aa21.49■■□□□ 1.03
HDAC7-210ENST00000430670 RTFDC1Q9BY42 306 aaPredicted RBP21.49■■□□□ 1.03
HDAC7-210ENST00000430670 ZNF277Q9NRM2 450 aaPredicted RBP21.49■■□□□ 1.03
HDAC7-210ENST00000430670 C9orf78Q9NZ63 289 aaPredicted RBP21.49■■□□□ 1.03
HDAC7-210ENST00000430670 GOLGB1Q14789 3259 aaKnown RBP21.48■■□□□ 1.03
HDAC7-210ENST00000430670 TOMM70O94826 608 aa21.48■■□□□ 1.03
HDAC7-210ENST00000430670 CTSWP56202 376 aa21.48■■□□□ 1.03
HDAC7-210ENST00000430670 EIF6P56537 245 aaKnown RBP21.48■■□□□ 1.03
HDAC7-210ENST00000430670 SLC4A10Q6U841 1118 aa21.48■■□□□ 1.03
HDAC7-210ENST00000430670 ANKRD18AQ8IVF6 992 aa21.48■■□□□ 1.03
HDAC7-210ENST00000430670 LARGE2Q8N3Y3 721 aa21.48■■□□□ 1.03
HDAC7-210ENST00000430670 SSH1Q8WYL5 1049 aa21.48■■□□□ 1.03
HDAC7-210ENST00000430670 SMC4Q9NTJ3 1288 aa21.48■■□□□ 1.03
HDAC7-210ENST00000430670 TNRC6CQ9HCJ0 1690 aaKnown RBP21.47■■□□□ 1.03
HDAC7-210ENST00000430670 PRELPP51888 382 aa21.47■■□□□ 1.03
HDAC7-210ENST00000430670 BRPF1P55201 1214 aaPredicted RBP21.47■■□□□ 1.03
HDAC7-210ENST00000430670 TTLL11Q8NHH1 800 aa21.47■■□□□ 1.03
HDAC7-210ENST00000430670 EYA3Q99504 573 aa21.47■■□□□ 1.03
HDAC7-210ENST00000430670 IQCA1LA6NCM1 817 aa21.46■■□□□ 1.03
HDAC7-210ENST00000430670 F6X3S4 739 aa21.46■■□□□ 1.03
HDAC7-210ENST00000430670 OLFM4Q6UX06 510 aa21.46■■□□□ 1.03
HDAC7-210ENST00000430670 NIM1KQ8IY84 436 aa21.46■■□□□ 1.03
HDAC7-210ENST00000430670 CELF1Q92879 486 aaKnown RBP21.46■■□□□ 1.03
HDAC7-210ENST00000430670 NSFL1CQ9UNZ2 370 aaKnown RBP21.46■■□□□ 1.03
HDAC7-210ENST00000430670 HDAC5Q9UQL6 1122 aa21.46■■□□□ 1.03
HDAC7-210ENST00000430670 FZD9O00144 591 aa21.45■■□□□ 1.02
HDAC7-210ENST00000430670 KIF3CO14782 793 aa21.45■■□□□ 1.02
HDAC7-210ENST00000430670 PPIP5K2O43314 1243 aa21.45■■□□□ 1.02
HDAC7-210ENST00000430670 RRAGCQ9HB90 399 aa21.45■■□□□ 1.02
HDAC7-210ENST00000430670 RTL9Q8NET4 1388 aa21.45■■□□□ 1.02
HDAC7-210ENST00000430670 FER1L6Q2WGJ9 1857 aa21.44■■□□□ 1.02
HDAC7-210ENST00000430670 GRM8O00222 908 aa21.44■■□□□ 1.02
HDAC7-210ENST00000430670 IGHMBP2P38935 993 aaKnown RBP21.44■■□□□ 1.02
HDAC7-210ENST00000430670 JARID2Q92833 1246 aaPredicted RBP21.44■■□□□ 1.02
HDAC7-210ENST00000430670 API5Q9BZZ5 524 aaKnown RBP21.44■■□□□ 1.02
HDAC7-210ENST00000430670 IPO8O15397 1037 aaKnown RBP21.43■■□□□ 1.02
HDAC7-210ENST00000430670 NMRK2Q9NPI5 230 aa21.43■■□□□ 1.02
HDAC7-210ENST00000430670 CSF1RP07333 972 aa21.42■■□□□ 1.02
HDAC7-210ENST00000430670 KIAA2012Q0VF49 1180 aa21.42■■□□□ 1.02
HDAC7-210ENST00000430670 WASHC4Q2M389 1173 aa21.42■■□□□ 1.02
HDAC7-210ENST00000430670 GPC2Q8N158 579 aa21.42■■□□□ 1.02
HDAC7-210ENST00000430670 RBM46Q8TBY0 533 aaKnown RBP21.42■■□□□ 1.02
HDAC7-210ENST00000430670 ARHGAP45Q92619 1136 aa21.42■■□□□ 1.02
HDAC7-210ENST00000430670 MPHOSPH8Q99549 860 aa21.42■■□□□ 1.02
HDAC7-210ENST00000430670 BSDC1Q9NW68 430 aaPredicted RBP21.42■■□□□ 1.02
HDAC7-210ENST00000430670 PODXL2Q9NZ53 605 aa21.42■■□□□ 1.02
HDAC7-210ENST00000430670 ANKIB1Q9P2G1 1089 aa21.42■■□□□ 1.02
HDAC7-210ENST00000430670 SBF1O95248 1867 aa21.41■■□□□ 1.02
HDAC7-210ENST00000430670 SNED1Q8TER0 1413 aa21.41■■□□□ 1.02
HDAC7-210ENST00000430670 KIF16BQ96L93 1317 aa21.41■■□□□ 1.02
HDAC7-210ENST00000430670 C6orf229H3BNL8 230 aa21.41■■□□□ 1.02
HDAC7-210ENST00000430670 CASP7P55210 303 aa21.41■■□□□ 1.02
HDAC7-210ENST00000430670 ZC3H12CQ9C0D7 883 aaKnown RBP21.41■■□□□ 1.02
HDAC7-210ENST00000430670 SEC31BQ9NQW1 1179 aa21.41■■□□□ 1.02
HDAC7-210ENST00000430670 ZNRF3Q9ULT6 936 aa21.41■■□□□ 1.02
HDAC7-210ENST00000430670 ZBED9Q6R2W3 1325 aa21.4■■□□□ 1.02
HDAC7-210ENST00000430670 ANKRD18BA2A2Z9 1011 aa21.4■■□□□ 1.02
HDAC7-210ENST00000430670 G3V3G9 751 aa21.4■■□□□ 1.02
HDAC7-210ENST00000430670 CCT4P50991 539 aaKnown RBP21.4■■□□□ 1.02
HDAC7-210ENST00000430670 FSTL1Q12841 308 aa21.4■■□□□ 1.02
HDAC7-210ENST00000430670 IFIT5Q13325 482 aaKnown RBP21.4■■□□□ 1.02
HDAC7-210ENST00000430670 DCAF8Q5TAQ9 597 aa21.4■■□□□ 1.02
HDAC7-210ENST00000430670 DDNO94850 711 aaPredicted RBP21.39■■□□□ 1.01
HDAC7-210ENST00000430670 RARSP54136 660 aaKnown RBP21.39■■□□□ 1.01
HDAC7-210ENST00000430670 TNIP1Q15025 636 aa21.39■■□□□ 1.01
HDAC7-210ENST00000430670 CCDC57Q2TAC2 916 aa21.39■■□□□ 1.01
HDAC7-210ENST00000430670 L3MBTL3Q96JM7 780 aaPredicted RBP21.39■■□□□ 1.01
HDAC7-210ENST00000430670 CCDC85AQ96PX6 553 aaPredicted RBP21.39■■□□□ 1.01
HDAC7-210ENST00000430670 BCL2L13Q9BXK5 485 aa21.39■■□□□ 1.01
HDAC7-210ENST00000430670 ANKRD2Q9GZV1 360 aa21.39■■□□□ 1.01
HDAC7-210ENST00000430670 GREM2Q9H772 168 aa21.39■■□□□ 1.01
HDAC7-210ENST00000430670 GGA1Q9UJY5 639 aa21.39■■□□□ 1.01
HDAC7-210ENST00000430670 XDHP47989 1333 aa21.38■■□□□ 1.01
HDAC7-210ENST00000430670 ITGA6P23229 1130 aa21.38■■□□□ 1.01
HDAC7-210ENST00000430670 ATP2B4P23634 1241 aa21.38■■□□□ 1.01
HDAC7-210ENST00000430670 AOC3Q16853 763 aa21.38■■□□□ 1.01
HDAC7-210ENST00000430670 LMOD1P29536 600 aaPredicted RBP21.37■■□□□ 1.01
HDAC7-210ENST00000430670 GPSM2P81274 684 aa21.37■■□□□ 1.01
HDAC7-210ENST00000430670 PNMA8AQ86V59 439 aaPredicted RBP21.37■■□□□ 1.01
HDAC7-210ENST00000430670 SMC1BQ8NDV3 1235 aa21.37■■□□□ 1.01
HDAC7-210ENST00000430670 NOB1Q9ULX3 412 aaKnown RBP21.37■■□□□ 1.01
HDAC7-210ENST00000430670 CHMP3Q9Y3E7 222 aa21.37■■□□□ 1.01
HDAC7-210ENST00000430670 UTYO14607 1347 aa21.36■■□□□ 1.01
HDAC7-210ENST00000430670 DDX60Q8IY21 1712 aaKnown RBP21.36■■□□□ 1.01
HDAC7-210ENST00000430670 TAF7LQ5H9L4 462 aa21.36■■□□□ 1.01
HDAC7-210ENST00000430670 TBC1D16Q8TBP0 767 aa21.36■■□□□ 1.01
HDAC7-210ENST00000430670 HACL1Q9UJ83 578 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms