RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 IQCA1LA6NCM1 817 aa15.28■□□□□ 0.04
HDAC4-202ENST00000430200 ITGBL1O95965 494 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-202ENST00000430200 FMR1Q06787 632 aaKnown RBP eCLIP15.28■□□□□ 0.04
HDAC4-202ENST00000430200 EAPPQ56P03 285 aaPredicted RBP15.28■□□□□ 0.04
HDAC4-202ENST00000430200 WWC1Q8IX03 1113 aa15.28■□□□□ 0.04
HDAC4-202ENST00000430200 MYD88Q99836 296 aa15.28■□□□□ 0.04
HDAC4-202ENST00000430200 ZNF316A6NFI3 1004 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-202ENST00000430200 YDJCA8MPS7 323 aa15.27■□□□□ 0.04
HDAC4-202ENST00000430200 EPS15P42566 896 aa15.27■□□□□ 0.04
HDAC4-202ENST00000430200 MAP1SQ66K74 1059 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-202ENST00000430200 G2E3Q7L622 706 aa15.27■□□□□ 0.04
HDAC4-202ENST00000430200 GPR101Q96P66 508 aaPredicted RBP15.27■□□□□ 0.04
HDAC4-202ENST00000430200 MRS2Q9HD23 443 aa15.27■□□□□ 0.04
HDAC4-202ENST00000430200 FANCIQ9NVI1 1328 aa15.26■□□□□ 0.03
HDAC4-202ENST00000430200 SHTN1A0MZ66 631 aa15.26■□□□□ 0.03
HDAC4-202ENST00000430200 TRIM28Q13263 835 aaKnown RBP15.26■□□□□ 0.03
HDAC4-202ENST00000430200 SF3B3Q15393 1217 aaKnown RBP15.26■□□□□ 0.03
HDAC4-202ENST00000430200 CCDC27Q2M243 656 aa15.26■□□□□ 0.03
HDAC4-202ENST00000430200 DDX46Q7L014 1031 aaKnown RBP15.26■□□□□ 0.03
HDAC4-202ENST00000430200 SP8Q8IXZ3 490 aa15.26■□□□□ 0.03
HDAC4-202ENST00000430200 JDP2Q8WYK2 163 aa15.26■□□□□ 0.03
HDAC4-202ENST00000430200 IRS4O14654 1257 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-202ENST00000430200 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
HDAC4-202ENST00000430200 CALD1Q05682 793 aaKnown RBP15.25■□□□□ 0.03
HDAC4-202ENST00000430200 CXCL9Q07325 125 aa15.25■□□□□ 0.03
HDAC4-202ENST00000430200 GOLGA2Q08379 1002 aa15.25■□□□□ 0.03
HDAC4-202ENST00000430200 KIAA2012Q0VF49 1180 aa15.25■□□□□ 0.03
HDAC4-202ENST00000430200 DPP8Q6V1X1 898 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-202ENST00000430200 RIC3Q7Z5B4 369 aa15.25■□□□□ 0.03
HDAC4-202ENST00000430200 NIM1KQ8IY84 436 aa15.25■□□□□ 0.03
HDAC4-202ENST00000430200 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
HDAC4-202ENST00000430200 SEC31BQ9NQW1 1179 aa15.25■□□□□ 0.03
HDAC4-202ENST00000430200 MKRN1Q9UHC7 482 aaKnown RBP15.25■□□□□ 0.03
HDAC4-202ENST00000430200 CNTNAP1P78357 1384 aa15.24■□□□□ 0.03
HDAC4-202ENST00000430200 BBOX1O75936 387 aa15.24■□□□□ 0.03
HDAC4-202ENST00000430200 EIF6P56537 245 aaKnown RBP15.24■□□□□ 0.03
HDAC4-202ENST00000430200 MPNDQ8N594 471 aa15.24■□□□□ 0.03
HDAC4-202ENST00000430200 CREBZFQ9NS37 354 aa15.24■□□□□ 0.03
HDAC4-202ENST00000430200 GPSM2P81274 684 aa15.23■□□□□ 0.03
HDAC4-202ENST00000430200 GRIPAP1Q4V328 841 aa15.23■□□□□ 0.03
HDAC4-202ENST00000430200 ZBTB38Q8NAP3 1195 aaPredicted RBP15.23■□□□□ 0.03
HDAC4-202ENST00000430200 CCDC85AQ96PX6 553 aaPredicted RBP15.23■□□□□ 0.03
HDAC4-202ENST00000430200 METTL22Q9BUU2 404 aaPredicted RBP15.23■□□□□ 0.03
HDAC4-202ENST00000430200 POLLQ9UGP5 575 aa15.23■□□□□ 0.03
HDAC4-202ENST00000430200 MAP3K2Q9Y2U5 619 aa15.23■□□□□ 0.03
HDAC4-202ENST00000430200 RTL9Q8NET4 1388 aa15.23■□□□□ 0.03
HDAC4-202ENST00000430200 RAD17O75943 681 aa15.22■□□□□ 0.03
HDAC4-202ENST00000430200 PCCAP05165 728 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-202ENST00000430200 ZEB1P37275 1124 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-202ENST00000430200 GMPSP49915 693 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-202ENST00000430200 CWF19L2Q2TBE0 894 aaKnown RBP15.22■□□□□ 0.03
HDAC4-202ENST00000430200 TWISTNBQ3B726 338 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-202ENST00000430200 CCDC30Q5VVM6 783 aa15.22■□□□□ 0.03
HDAC4-202ENST00000430200 GPRC5DQ9NZD1 345 aa15.22■□□□□ 0.03
HDAC4-202ENST00000430200 ZNRF3Q9ULT6 936 aa15.22■□□□□ 0.03
HDAC4-202ENST00000430200 SALL2Q9Y467 1007 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-202ENST00000430200 IL16Q14005 1332 aa15.21■□□□□ 0.03
HDAC4-202ENST00000430200 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.03
HDAC4-202ENST00000430200 TRAF5O00463 557 aa15.21■□□□□ 0.03
HDAC4-202ENST00000430200 HSPA1AP0DMV8 641 aaKnown RBP15.21■□□□□ 0.03
HDAC4-202ENST00000430200 HSPA1BP0DMV9 641 aaKnown RBP15.21■□□□□ 0.03
HDAC4-202ENST00000430200 COL13A1Q5TAT6 717 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-202ENST00000430200 IFFO2Q5TF58 517 aa15.21■□□□□ 0.03
HDAC4-202ENST00000430200 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.03
HDAC4-202ENST00000430200 TRPM4Q8TD43 1214 aa15.21■□□□□ 0.03
HDAC4-202ENST00000430200 DBNDD1Q9H9R9 158 aa15.21■□□□□ 0.03
HDAC4-202ENST00000430200 WTIPA6NIX2 430 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-202ENST00000430200 CNTROBQ8N137 903 aa15.2■□□□□ 0.02
HDAC4-202ENST00000430200 CCDC191Q8NCU4 936 aa15.2■□□□□ 0.02
HDAC4-202ENST00000430200 KCNQ5Q9NR82 932 aa15.2■□□□□ 0.02
HDAC4-202ENST00000430200 CWC25Q9NXE8 425 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-202ENST00000430200 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
HDAC4-202ENST00000430200 CDHR2Q9BYE9 1310 aa15.19■□□□□ 0.02
HDAC4-202ENST00000430200 ANP32CO43423 234 aa15.19■□□□□ 0.02
HDAC4-202ENST00000430200 EGFRP00533 1210 aa15.19■□□□□ 0.02
HDAC4-202ENST00000430200 HIRAP54198 1017 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-202ENST00000430200 KSR2Q6VAB6 950 aa15.19■□□□□ 0.02
HDAC4-202ENST00000430200 PNMA8AQ86V59 439 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-202ENST00000430200 SUPT20HQ8NEM7 779 aa15.19■□□□□ 0.02
HDAC4-202ENST00000430200 NSFL1CQ9UNZ2 370 aaKnown RBP15.19■□□□□ 0.02
HDAC4-202ENST00000430200 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-202ENST00000430200 NEURL1BA8MQ27 555 aa15.18■□□□□ 0.02
HDAC4-202ENST00000430200 RIMBP2O15034 1052 aa15.18■□□□□ 0.02
HDAC4-202ENST00000430200 LMOD1P29536 600 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-202ENST00000430200 CIAPIN1Q6FI81 312 aa15.18■□□□□ 0.02
HDAC4-202ENST00000430200 TMC4Q7Z404 712 aa15.18■□□□□ 0.02
HDAC4-202ENST00000430200 TBC1D16Q8TBP0 767 aa15.18■□□□□ 0.02
HDAC4-202ENST00000430200 VPS33BQ9H267 617 aa15.18■□□□□ 0.02
HDAC4-202ENST00000430200 TMEM88BA6NKF7 163 aa15.17■□□□□ 0.02
HDAC4-202ENST00000430200 PSMD14O00487 310 aa15.17■□□□□ 0.02
HDAC4-202ENST00000430200 VEGFBP49765 207 aa15.17■□□□□ 0.02
HDAC4-202ENST00000430200 CASP7P55210 303 aa15.17■□□□□ 0.02
HDAC4-202ENST00000430200 CTSWP56202 376 aa15.17■□□□□ 0.02
HDAC4-202ENST00000430200 RPS8P62241 208 aaKnown RBP15.17■□□□□ 0.02
HDAC4-202ENST00000430200 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
HDAC4-202ENST00000430200 FLIIQ13045 1269 aa15.17■□□□□ 0.02
HDAC4-202ENST00000430200 DOK7Q18PE1 504 aa15.17■□□□□ 0.02
HDAC4-202ENST00000430200 DLK2Q6UY11 383 aa15.17■□□□□ 0.02
HDAC4-202ENST00000430200 ECM29Q5VYK3 1845 aa15.17■□□□□ 0.02
HDAC4-202ENST00000430200 ARAP2Q8WZ64 1704 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms