RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
GARNL3-204ENST00000429629 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
GARNL3-204ENST00000429629 CLUAP1Q96AJ1 413 aa18.81■□□□□ 0.6
GARNL3-204ENST00000429629 GRAPQ13588 217 aa18.8■□□□□ 0.6
GARNL3-204ENST00000429629 GPR162Q16538 588 aa18.8■□□□□ 0.6
GARNL3-204ENST00000429629 PRPF40BQ6NWY9 871 aaKnown RBP18.8■□□□□ 0.6
GARNL3-204ENST00000429629 GRAPLQ8TC17 118 aaPredicted RBP18.8■□□□□ 0.6
GARNL3-204ENST00000429629 CHMP4BQ9H444 224 aaKnown RBP18.8■□□□□ 0.6
GARNL3-204ENST00000429629 BCS1LQ9Y276 419 aa18.8■□□□□ 0.6
GARNL3-204ENST00000429629 UBTFL1P0CB47 393 aaPredicted RBP18.79■□□□□ 0.6
GARNL3-204ENST00000429629 RLBP1P12271 317 aa18.79■□□□□ 0.6
GARNL3-204ENST00000429629 KAZALD1Q96I82 304 aa18.79■□□□□ 0.6
GARNL3-204ENST00000429629 TNNQ9UQP3 1299 aa18.79■□□□□ 0.6
GARNL3-204ENST00000429629 ZBTB7BO15156 539 aaPredicted RBP18.78■□□□□ 0.6
GARNL3-204ENST00000429629 RPS8P62241 208 aaKnown RBP18.78■□□□□ 0.6
GARNL3-204ENST00000429629 SUCLG2Q96I99 432 aa18.78■□□□□ 0.6
GARNL3-204ENST00000429629 CDC5LQ99459 802 aaKnown RBP18.78■□□□□ 0.6
GARNL3-204ENST00000429629 YBX3P16989 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
GARNL3-204ENST00000429629 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.6
GARNL3-204ENST00000429629 SP8Q8IXZ3 490 aa18.77■□□□□ 0.6
GARNL3-204ENST00000429629 ATP6V0A2Q9Y487 856 aa18.77■□□□□ 0.6
GARNL3-204ENST00000429629 KIAA1551Q9HCM1 1747 aa18.77■□□□□ 0.59
GARNL3-204ENST00000429629 PLIN1O60240 522 aa18.76■□□□□ 0.59
GARNL3-204ENST00000429629 EPHA10Q5JZY3 1008 aa18.76■□□□□ 0.59
GARNL3-204ENST00000429629 RTKN2Q8IZC4 609 aa18.76■□□□□ 0.59
GARNL3-204ENST00000429629 MEIS3Q99687 375 aa18.76■□□□□ 0.59
GARNL3-204ENST00000429629 GREM2Q9H772 168 aa18.76■□□□□ 0.59
GARNL3-204ENST00000429629 DDX19BQ9UMR2 479 aa18.76■□□□□ 0.59
GARNL3-204ENST00000429629 ANKRD31Q8N7Z5 1873 aa18.75■□□□□ 0.59
GARNL3-204ENST00000429629 GNAI2P04899 355 aa18.75■□□□□ 0.59
GARNL3-204ENST00000429629 RRP1P56182 461 aaKnown RBP18.75■□□□□ 0.59
GARNL3-204ENST00000429629 MVPQ14764 893 aaKnown RBP18.75■□□□□ 0.59
GARNL3-204ENST00000429629 ITPRIPQ8IWB1 547 aa18.75■□□□□ 0.59
GARNL3-204ENST00000429629 PANK1Q8TE04 598 aa18.75■□□□□ 0.59
GARNL3-204ENST00000429629 TMX4Q9H1E5 349 aaPredicted RBP18.75■□□□□ 0.59
GARNL3-204ENST00000429629 ANKRD18BA2A2Z9 1011 aa18.74■□□□□ 0.59
GARNL3-204ENST00000429629 PPEF1O14829 653 aaPredicted RBP18.74■□□□□ 0.59
GARNL3-204ENST00000429629 ITGA6P23229 1130 aa18.74■□□□□ 0.59
GARNL3-204ENST00000429629 IFIT5Q13325 482 aaKnown RBP18.74■□□□□ 0.59
GARNL3-204ENST00000429629 MTX1Q13505 466 aa18.74■□□□□ 0.59
GARNL3-204ENST00000429629 CCDC93Q567U6 631 aa18.74■□□□□ 0.59
GARNL3-204ENST00000429629 ANKRD18AQ8IVF6 992 aa18.74■□□□□ 0.59
GARNL3-204ENST00000429629 ANKRD44Q8N8A2 993 aa18.74■□□□□ 0.59
GARNL3-204ENST00000429629 CELF1Q92879 486 aaKnown RBP18.74■□□□□ 0.59
GARNL3-204ENST00000429629 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
GARNL3-204ENST00000429629 BSDC1Q9NW68 430 aaPredicted RBP18.74■□□□□ 0.59
GARNL3-204ENST00000429629 C21orf2O43822 256 aa18.73■□□□□ 0.59
GARNL3-204ENST00000429629 CCDC57Q2TAC2 916 aa18.73■□□□□ 0.59
GARNL3-204ENST00000429629 SEC31BQ9NQW1 1179 aa18.73■□□□□ 0.59
GARNL3-204ENST00000429629 LTBP3Q9NS15 1303 aa18.73■□□□□ 0.59
GARNL3-204ENST00000429629 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
GARNL3-204ENST00000429629 VPS33BQ9H267 617 aa18.72■□□□□ 0.59
GARNL3-204ENST00000429629 TNRC6CQ9HCJ0 1690 aaKnown RBP18.72■□□□□ 0.59
GARNL3-204ENST00000429629 IGHMBP2P38935 993 aaKnown RBP18.71■□□□□ 0.59
GARNL3-204ENST00000429629 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
GARNL3-204ENST00000429629 PSMD1Q99460 953 aa18.71■□□□□ 0.59
GARNL3-204ENST00000429629 RTFDC1Q9BY42 306 aaPredicted RBP18.71■□□□□ 0.59
GARNL3-204ENST00000429629 ZBTB40Q9NUA8 1239 aa18.71■□□□□ 0.59
GARNL3-204ENST00000429629 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
GARNL3-204ENST00000429629 LRRFIP2Q9Y608 721 aaKnown RBP18.71■□□□□ 0.59
GARNL3-204ENST00000429629 ARHGAP27Q6ZUM4 889 aa18.7■□□□□ 0.58
GARNL3-204ENST00000429629 PODXL2Q9NZ53 605 aa18.7■□□□□ 0.58
GARNL3-204ENST00000429629 COG6Q9Y2V7 657 aa18.7■□□□□ 0.58
GARNL3-204ENST00000429629 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
GARNL3-204ENST00000429629 DLEC1Q9Y238 1755 aa18.69■□□□□ 0.58
GARNL3-204ENST00000429629 AAMPQ13685 434 aa18.69■□□□□ 0.58
GARNL3-204ENST00000429629 C20orf194Q5TEA3 1177 aa18.69■□□□□ 0.58
GARNL3-204ENST00000429629 CCDC85AQ96PX6 553 aaPredicted RBP18.69■□□□□ 0.58
GARNL3-204ENST00000429629 MPHOSPH8Q99549 860 aa18.69■□□□□ 0.58
GARNL3-204ENST00000429629 N4BP2Q86UW6 1770 aaPredicted RBP18.68■□□□□ 0.58
GARNL3-204ENST00000429629 GOLGB1Q14789 3259 aaKnown RBP18.68■□□□□ 0.58
GARNL3-204ENST00000429629 SNED1Q8TER0 1413 aa18.68■□□□□ 0.58
GARNL3-204ENST00000429629 FKBP4Q02790 459 aaKnown RBP eCLIP18.68■□□□□ 0.58
GARNL3-204ENST00000429629 SUPT20HQ8NEM7 779 aa18.68■□□□□ 0.58
GARNL3-204ENST00000429629 WWC3Q9ULE0 1092 aa18.68■□□□□ 0.58
GARNL3-204ENST00000429629 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
GARNL3-204ENST00000429629 LAMB2P55268 1798 aa18.68■□□□□ 0.58
GARNL3-204ENST00000429629 COL11A2P13942 1736 aaPredicted RBP18.67■□□□□ 0.58
GARNL3-204ENST00000429629 NFKBIEO00221 500 aa18.67■□□□□ 0.58
GARNL3-204ENST00000429629 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
GARNL3-204ENST00000429629 LDHAL6AQ6ZMR3 332 aa18.67■□□□□ 0.58
GARNL3-204ENST00000429629 MPNDQ8N594 471 aa18.67■□□□□ 0.58
GARNL3-204ENST00000429629 ANKRD2Q9GZV1 360 aa18.67■□□□□ 0.58
GARNL3-204ENST00000429629 TAOK3Q9H2K8 898 aa18.67■□□□□ 0.58
GARNL3-204ENST00000429629 MINPP1Q9UNW1 487 aa18.67■□□□□ 0.58
GARNL3-204ENST00000429629 ATP8B2P98198 1209 aa18.66■□□□□ 0.58
GARNL3-204ENST00000429629 TAF7LQ5H9L4 462 aa18.66■□□□□ 0.58
GARNL3-204ENST00000429629 RPAP2Q8IXW5 612 aaPredicted RBP18.66■□□□□ 0.58
GARNL3-204ENST00000429629 COPRSQ9NQ92 184 aa18.66■□□□□ 0.58
GARNL3-204ENST00000429629 BRCA1P38398 1863 aaKnown RBP18.66■□□□□ 0.58
GARNL3-204ENST00000429629 LMNB1P20700 586 aa18.65■□□□□ 0.58
GARNL3-204ENST00000429629 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
GARNL3-204ENST00000429629 DPP8Q6V1X1 898 aaPredicted RBP18.65■□□□□ 0.58
GARNL3-204ENST00000429629 RIPOR2Q9Y4F9 1068 aa18.65■□□□□ 0.58
GARNL3-204ENST00000429629 SUPT16HQ9Y5B9 1047 aaKnown RBP18.65■□□□□ 0.58
GARNL3-204ENST00000429629 CIAO1O76071 339 aa18.64■□□□□ 0.57
GARNL3-204ENST00000429629 SSH3Q8TE77 659 aa18.64■□□□□ 0.57
GARNL3-204ENST00000429629 ZNF219Q9P2Y4 722 aaPredicted RBP18.64■□□□□ 0.57
GARNL3-204ENST00000429629 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
GARNL3-204ENST00000429629 LEMD3Q9Y2U8 911 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms