RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 GRAPLQ8TC17 118 aaPredicted RBP17.11■□□□□ 0.33
HLA-F-219ENST00000429294 LAS1LQ9Y4W2 734 aaKnown RBP17.11■□□□□ 0.33
HLA-F-219ENST00000429294 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
HLA-F-219ENST00000429294 HSPA8P11142 646 aaKnown RBP17.1■□□□□ 0.33
HLA-F-219ENST00000429294 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
HLA-F-219ENST00000429294 GPR101Q96P66 508 aaPredicted RBP17.1■□□□□ 0.33
HLA-F-219ENST00000429294 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
HLA-F-219ENST00000429294 TRAF5O00463 557 aa17.09■□□□□ 0.33
HLA-F-219ENST00000429294 WDR43Q15061 677 aaKnown RBP eCLIP17.09■□□□□ 0.33
HLA-F-219ENST00000429294 SLC51AQ86UW1 340 aa17.09■□□□□ 0.33
HLA-F-219ENST00000429294 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
HLA-F-219ENST00000429294 TLL2Q9Y6L7 1015 aa17.09■□□□□ 0.33
HLA-F-219ENST00000429294 CHL1O00533 1208 aa17.08■□□□□ 0.32
HLA-F-219ENST00000429294 RAD17O75943 681 aa17.08■□□□□ 0.32
HLA-F-219ENST00000429294 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.32
HLA-F-219ENST00000429294 HDGFL1Q5TGJ6 251 aa17.08■□□□□ 0.32
HLA-F-219ENST00000429294 CST9Q5W186 159 aa17.08■□□□□ 0.32
HLA-F-219ENST00000429294 CYP4F22Q6NT55 531 aa17.08■□□□□ 0.32
HLA-F-219ENST00000429294 TRPM7Q96QT4 1865 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 H7C1D1 291 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 CELF2O95319 508 aaKnown RBP17.07■□□□□ 0.32
HLA-F-219ENST00000429294 HOXB7P09629 217 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 MAP2K2P36507 400 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 CCDC146Q8IYE0 955 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 PLBD2Q8NHP8 589 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 CHPF2Q9P2E5 772 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 DBF4Q9UBU7 674 aaPredicted RBP17.07■□□□□ 0.32
HLA-F-219ENST00000429294 ANKRD36CQ5JPF3 1778 aa17.07■□□□□ 0.32
HLA-F-219ENST00000429294 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
HLA-F-219ENST00000429294 WASHC4Q2M389 1173 aa17.05■□□□□ 0.32
HLA-F-219ENST00000429294 CDC37L1Q7L3B6 337 aa17.05■□□□□ 0.32
HLA-F-219ENST00000429294 GLIS2Q9BZE0 524 aaPredicted RBP17.05■□□□□ 0.32
HLA-F-219ENST00000429294 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
HLA-F-219ENST00000429294 HYPKQ9NX55 129 aa17.05■□□□□ 0.32
HLA-F-219ENST00000429294 PGAP2Q9UHJ9 254 aa17.05■□□□□ 0.32
HLA-F-219ENST00000429294 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
HLA-F-219ENST00000429294 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
HLA-F-219ENST00000429294 CA12O43570 354 aa17.04■□□□□ 0.32
HLA-F-219ENST00000429294 HSP90B1P14625 803 aaKnown RBP17.04■□□□□ 0.32
HLA-F-219ENST00000429294 KRT24Q2M2I5 525 aa17.04■□□□□ 0.32
HLA-F-219ENST00000429294 SAPCD2Q86UD0 394 aa17.04■□□□□ 0.32
HLA-F-219ENST00000429294 ABHD8Q96I13 439 aa17.04■□□□□ 0.32
HLA-F-219ENST00000429294 HHIPL1Q96JK4 782 aa17.04■□□□□ 0.32
HLA-F-219ENST00000429294 LAMB2P55268 1798 aa17.03■□□□□ 0.32
HLA-F-219ENST00000429294 C6orf229H3BNL8 230 aa17.03■□□□□ 0.32
HLA-F-219ENST00000429294 SF3B3Q15393 1217 aaKnown RBP17.03■□□□□ 0.32
HLA-F-219ENST00000429294 FAM89AQ96GI7 184 aa17.03■□□□□ 0.32
HLA-F-219ENST00000429294 EYA3Q99504 573 aa17.03■□□□□ 0.32
HLA-F-219ENST00000429294 ISCA1Q9BUE6 129 aa17.03■□□□□ 0.32
HLA-F-219ENST00000429294 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.32
HLA-F-219ENST00000429294 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.32
HLA-F-219ENST00000429294 MICALL2Q8IY33 904 aa17.02■□□□□ 0.32
HLA-F-219ENST00000429294 DPF2Q92785 391 aa17.02■□□□□ 0.32
HLA-F-219ENST00000429294 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
HLA-F-219ENST00000429294 CFAP44Q96MT7 982 aa17.02■□□□□ 0.32
HLA-F-219ENST00000429294 TRIM35Q9UPQ4 493 aa17.02■□□□□ 0.32
HLA-F-219ENST00000429294 YDJCA8MPS7 323 aa17.01■□□□□ 0.31
HLA-F-219ENST00000429294 AOC2O75106 756 aa17.01■□□□□ 0.31
HLA-F-219ENST00000429294 G3V3G9 751 aa17■□□□□ 0.31
HLA-F-219ENST00000429294 IRS4O14654 1257 aaPredicted RBP17■□□□□ 0.31
HLA-F-219ENST00000429294 RIMBP2O15034 1052 aa17■□□□□ 0.31
HLA-F-219ENST00000429294 RPS12P25398 132 aaKnown RBP17■□□□□ 0.31
HLA-F-219ENST00000429294 HIRAP54198 1017 aaPredicted RBP17■□□□□ 0.31
HLA-F-219ENST00000429294 GOLGA2Q08379 1002 aa17■□□□□ 0.31
HLA-F-219ENST00000429294 TRIM28Q13263 835 aaKnown RBP17■□□□□ 0.31
HLA-F-219ENST00000429294 RTL5Q5HYW3 569 aaPredicted RBP17■□□□□ 0.31
HLA-F-219ENST00000429294 DCAF8Q5TAQ9 597 aa17■□□□□ 0.31
HLA-F-219ENST00000429294 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
HLA-F-219ENST00000429294 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
HLA-F-219ENST00000429294 TRPM4Q8TD43 1214 aa17■□□□□ 0.31
HLA-F-219ENST00000429294 CELF1Q92879 486 aaKnown RBP17■□□□□ 0.31
HLA-F-219ENST00000429294 DBNDD1Q9H9R9 158 aa17■□□□□ 0.31
HLA-F-219ENST00000429294 THSD7BQ9C0I4 1608 aa16.99■□□□□ 0.31
HLA-F-219ENST00000429294 PSMD14O00487 310 aa16.99■□□□□ 0.31
HLA-F-219ENST00000429294 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
HLA-F-219ENST00000429294 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
HLA-F-219ENST00000429294 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
HLA-F-219ENST00000429294 USP48Q86UV5 1035 aa16.99■□□□□ 0.31
HLA-F-219ENST00000429294 CHMP4AQ9BY43 222 aa16.99■□□□□ 0.31
HLA-F-219ENST00000429294 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
HLA-F-219ENST00000429294 ADAMTS8Q9UP79 889 aa16.99■□□□□ 0.31
HLA-F-219ENST00000429294 ZBTB12Q9Y330 459 aaPredicted RBP16.99■□□□□ 0.31
HLA-F-219ENST00000429294 TAF1P21675 1872 aa16.99■□□□□ 0.31
HLA-F-219ENST00000429294 HUNKP57058 714 aa16.98■□□□□ 0.31
HLA-F-219ENST00000429294 NOGQ13253 232 aa16.98■□□□□ 0.31
HLA-F-219ENST00000429294 KRT26Q7Z3Y9 468 aa16.98■□□□□ 0.31
HLA-F-219ENST00000429294 DCPSQ96C86 337 aaKnown RBP16.98■□□□□ 0.31
HLA-F-219ENST00000429294 TSKSQ9UJT2 592 aa16.98■□□□□ 0.31
HLA-F-219ENST00000429294 CCDC85CA6NKD9 419 aa16.97■□□□□ 0.31
HLA-F-219ENST00000429294 ECE2O60344 883 aa16.97■□□□□ 0.31
HLA-F-219ENST00000429294 GPSM2P81274 684 aa16.97■□□□□ 0.31
HLA-F-219ENST00000429294 SAMD7Q7Z3H4 446 aa16.97■□□□□ 0.31
HLA-F-219ENST00000429294 ZBTB38Q8NAP3 1195 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-219ENST00000429294 MBIPQ9NS73 344 aa16.97■□□□□ 0.31
HLA-F-219ENST00000429294 POLLQ9UGP5 575 aa16.97■□□□□ 0.31
HLA-F-219ENST00000429294 SHTN1A0MZ66 631 aa16.96■□□□□ 0.31
HLA-F-219ENST00000429294 DOK7Q18PE1 504 aa16.96■□□□□ 0.31
HLA-F-219ENST00000429294 TBC1D10BQ4KMP7 808 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms