RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 SSH1Q8WYL5 1049 aa21.29■■□□□ 1
VRK2-204ENST00000428021 H7C1W4 665 aa21.28■■□□□ 1
VRK2-204ENST00000428021 BEND3Q5T5X7 828 aa21.28■■□□□ 1
VRK2-204ENST00000428021 PSMD1Q99460 953 aa21.28■■□□□ 1
VRK2-204ENST00000428021 ZNF277Q9NRM2 450 aaPredicted RBP21.28■■□□□ 1
VRK2-204ENST00000428021 PDE8AO60658 829 aa21.27■■□□□ 1
VRK2-204ENST00000428021 HSP90B1P14625 803 aaKnown RBP21.27■■□□□ 1
VRK2-204ENST00000428021 CELF1Q92879 486 aaKnown RBP21.27■■□□□ 1
VRK2-204ENST00000428021 CASP7P55210 303 aa21.26■□□□□ 0.99
VRK2-204ENST00000428021 HNRNPUQ00839 825 aaKnown RBP eCLIP21.26■□□□□ 0.99
VRK2-204ENST00000428021 GRIPAP1Q4V328 841 aa21.26■□□□□ 0.99
VRK2-204ENST00000428021 SP8Q8IXZ3 490 aa21.26■□□□□ 0.99
VRK2-204ENST00000428021 ALDH1L2Q3SY69 923 aa21.25■□□□□ 0.99
VRK2-204ENST00000428021 UBE3BQ7Z3V4 1068 aa21.25■□□□□ 0.99
VRK2-204ENST00000428021 NMRK2Q9NPI5 230 aa21.25■□□□□ 0.99
VRK2-204ENST00000428021 SEC31BQ9NQW1 1179 aa21.25■□□□□ 0.99
VRK2-204ENST00000428021 GLTPD2A6NH11 291 aa21.24■□□□□ 0.99
VRK2-204ENST00000428021 KIF3CO14782 793 aa21.24■□□□□ 0.99
VRK2-204ENST00000428021 CT47B1P0C2W7 299 aaPredicted RBP21.24■□□□□ 0.99
VRK2-204ENST00000428021 BCL2L13Q9BXK5 485 aa21.24■□□□□ 0.99
VRK2-204ENST00000428021 LRRC37AA6NMS7 1700 aa21.24■□□□□ 0.99
VRK2-204ENST00000428021 IARSP41252 1262 aaKnown RBP21.23■□□□□ 0.99
VRK2-204ENST00000428021 CTSWP56202 376 aa21.23■□□□□ 0.99
VRK2-204ENST00000428021 CCDC152Q4G0S7 254 aa21.23■□□□□ 0.99
VRK2-204ENST00000428021 TMC4Q7Z404 712 aa21.23■□□□□ 0.99
VRK2-204ENST00000428021 MYH3P11055 1940 aa21.23■□□□□ 0.99
VRK2-204ENST00000428021 KDM2BQ8NHM5 1336 aa21.23■□□□□ 0.99
VRK2-204ENST00000428021 COL4A5P29400 1685 aa21.22■□□□□ 0.99
VRK2-204ENST00000428021 RPS8P62241 208 aaKnown RBP21.22■□□□□ 0.99
VRK2-204ENST00000428021 TTLL11Q8NHH1 800 aa21.22■□□□□ 0.99
VRK2-204ENST00000428021 CCDC85AQ96PX6 553 aaPredicted RBP21.22■□□□□ 0.99
VRK2-204ENST00000428021 PLA2G12BQ9BX93 195 aa21.22■□□□□ 0.99
VRK2-204ENST00000428021 RTFDC1Q9BY42 306 aaPredicted RBP21.22■□□□□ 0.99
VRK2-204ENST00000428021 SLC4A10Q6U841 1118 aa21.21■□□□□ 0.99
VRK2-204ENST00000428021 TMX4Q9H1E5 349 aaPredicted RBP21.21■□□□□ 0.99
VRK2-204ENST00000428021 PTPRCP08575 1304 aa21.21■□□□□ 0.99
VRK2-204ENST00000428021 MPNDQ8N594 471 aa21.2■□□□□ 0.98
VRK2-204ENST00000428021 SMC4Q9NTJ3 1288 aa21.2■□□□□ 0.98
VRK2-204ENST00000428021 ALDH1L1O75891 902 aa21.19■□□□□ 0.98
VRK2-204ENST00000428021 DPP8Q6V1X1 898 aaPredicted RBP21.19■□□□□ 0.98
VRK2-204ENST00000428021 GREM2Q9H772 168 aa21.19■□□□□ 0.98
VRK2-204ENST00000428021 RRAGCQ9HB90 399 aa21.19■□□□□ 0.98
VRK2-204ENST00000428021 DUOX1Q9NRD9 1551 aa21.19■□□□□ 0.98
VRK2-204ENST00000428021 FZD9O00144 591 aa21.18■□□□□ 0.98
VRK2-204ENST00000428021 RARSP54136 660 aaKnown RBP21.18■□□□□ 0.98
VRK2-204ENST00000428021 BRPF1P55201 1214 aaPredicted RBP21.18■□□□□ 0.98
VRK2-204ENST00000428021 C1QTNF8P60827 252 aa21.18■□□□□ 0.98
VRK2-204ENST00000428021 DPY19L2Q6NUT2 758 aa21.18■□□□□ 0.98
VRK2-204ENST00000428021 SRCIN1Q9C0H9 1055 aa21.18■□□□□ 0.98
VRK2-204ENST00000428021 RTL9Q8NET4 1388 aa21.18■□□□□ 0.98
VRK2-204ENST00000428021 POTECB2RU33 542 aa21.17■□□□□ 0.98
VRK2-204ENST00000428021 GRM8O00222 908 aa21.17■□□□□ 0.98
VRK2-204ENST00000428021 CSF1RP07333 972 aa21.17■□□□□ 0.98
VRK2-204ENST00000428021 LTBP1Q14766 1721 aa21.17■□□□□ 0.98
VRK2-204ENST00000428021 WDR90Q96KV7 1748 aa21.16■□□□□ 0.98
VRK2-204ENST00000428021 ZBED9Q6R2W3 1325 aa21.16■□□□□ 0.98
VRK2-204ENST00000428021 ZNF541Q9H0D2 1346 aa21.16■□□□□ 0.98
VRK2-204ENST00000428021 DDNO94850 711 aaPredicted RBP21.16■□□□□ 0.98
VRK2-204ENST00000428021 GPSM2P81274 684 aa21.16■□□□□ 0.98
VRK2-204ENST00000428021 FOXO4P98177 505 aa21.16■□□□□ 0.98
VRK2-204ENST00000428021 LARGE2Q8N3Y3 721 aa21.16■□□□□ 0.98
VRK2-204ENST00000428021 SUPT20HQ8NEM7 779 aa21.16■□□□□ 0.98
VRK2-204ENST00000428021 VPS33BQ9H267 617 aa21.16■□□□□ 0.98
VRK2-204ENST00000428021 PPIP5K2O43314 1243 aa21.15■□□□□ 0.98
VRK2-204ENST00000428021 AOC3Q16853 763 aa21.15■□□□□ 0.98
VRK2-204ENST00000428021 ANKRD18AQ8IVF6 992 aa21.15■□□□□ 0.98
VRK2-204ENST00000428021 JDP2Q8WYK2 163 aa21.15■□□□□ 0.98
VRK2-204ENST00000428021 NSFL1CQ9UNZ2 370 aaKnown RBP21.15■□□□□ 0.98
VRK2-204ENST00000428021 EPHA10Q5JZY3 1008 aa21.14■□□□□ 0.97
VRK2-204ENST00000428021 CDC5LQ99459 802 aaKnown RBP21.14■□□□□ 0.97
VRK2-204ENST00000428021 C9orf78Q9NZ63 289 aaPredicted RBP21.14■□□□□ 0.97
VRK2-204ENST00000428021 POLLQ9UGP5 575 aa21.14■□□□□ 0.97
VRK2-204ENST00000428021 NOB1Q9ULX3 412 aaKnown RBP21.14■□□□□ 0.97
VRK2-204ENST00000428021 UTYO14607 1347 aa21.13■□□□□ 0.97
VRK2-204ENST00000428021 VEGFAP15692 232 aaPredicted RBP21.13■□□□□ 0.97
VRK2-204ENST00000428021 KIAA2012Q0VF49 1180 aa21.13■□□□□ 0.97
VRK2-204ENST00000428021 FAM161AQ3B820 660 aa21.13■□□□□ 0.97
VRK2-204ENST00000428021 ITGA6P23229 1130 aa21.12■□□□□ 0.97
VRK2-204ENST00000428021 KAZALD1Q96I82 304 aa21.12■□□□□ 0.97
VRK2-204ENST00000428021 PODXL2Q9NZ53 605 aa21.12■□□□□ 0.97
VRK2-204ENST00000428021 SPEF2Q9C093 1822 aa21.12■□□□□ 0.97
VRK2-204ENST00000428021 TOMM70O94826 608 aa21.11■□□□□ 0.97
VRK2-204ENST00000428021 NBPF7P0C2Y1 421 aaPredicted RBP21.11■□□□□ 0.97
VRK2-204ENST00000428021 NIM1KQ8IY84 436 aa21.11■□□□□ 0.97
VRK2-204ENST00000428021 TBC1D16Q8TBP0 767 aa21.11■□□□□ 0.97
VRK2-204ENST00000428021 L3MBTL3Q96JM7 780 aaPredicted RBP21.11■□□□□ 0.97
VRK2-204ENST00000428021 BSDC1Q9NW68 430 aaPredicted RBP21.11■□□□□ 0.97
VRK2-204ENST00000428021 SUCLG2Q96I99 432 aa21.1■□□□□ 0.97
VRK2-204ENST00000428021 C6orf229H3BNL8 230 aa21.09■□□□□ 0.97
VRK2-204ENST00000428021 EIF6P56537 245 aaKnown RBP21.09■□□□□ 0.97
VRK2-204ENST00000428021 WASHC4Q2M389 1173 aa21.09■□□□□ 0.97
VRK2-204ENST00000428021 LMBR1LQ6UX01 489 aa21.09■□□□□ 0.97
VRK2-204ENST00000428021 GPR101Q96P66 508 aaPredicted RBP21.09■□□□□ 0.97
VRK2-204ENST00000428021 USP44Q9H0E7 712 aa21.09■□□□□ 0.97
VRK2-204ENST00000428021 ZNRF3Q9ULT6 936 aa21.09■□□□□ 0.97
VRK2-204ENST00000428021 MINPP1Q9UNW1 487 aa21.09■□□□□ 0.97
VRK2-204ENST00000428021 BCAR3O75815 825 aa21.08■□□□□ 0.97
VRK2-204ENST00000428021 GPC2Q8N158 579 aa21.08■□□□□ 0.97
VRK2-204ENST00000428021 RBM46Q8TBY0 533 aaKnown RBP21.08■□□□□ 0.97
VRK2-204ENST00000428021 API5Q9BZZ5 524 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms