RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 XAGE3Q8WTP9 111 aa11.42□□□□□ -0.58
LINC00963-204ENST00000427778 ZNF521Q96K83 1311 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 DDX60Q8IY21 1712 aaKnown RBP11.41□□□□□ -0.58
LINC00963-204ENST00000427778 NPHP1O15259 732 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 NTSR2O95665 410 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 PLBD2Q8NHP8 589 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 CNKSR1Q969H4 720 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 AIDAQ96BJ3 306 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 MASTLQ96GX5 879 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
LINC00963-204ENST00000427778 THSD7BQ9C0I4 1608 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 CNTNAP1P78357 1384 aa11.41□□□□□ -0.58
LINC00963-204ENST00000427778 FANCIQ9NVI1 1328 aa11.4□□□□□ -0.58
LINC00963-204ENST00000427778 NPR1P16066 1061 aa11.4□□□□□ -0.58
LINC00963-204ENST00000427778 CTCFP49711 727 aaPredicted RBP11.4□□□□□ -0.58
LINC00963-204ENST00000427778 PPP1R42Q7Z4L9 355 aa11.4□□□□□ -0.58
LINC00963-204ENST00000427778 TSR2Q969E8 191 aaKnown RBP11.4□□□□□ -0.58
LINC00963-204ENST00000427778 LTBP3Q9NS15 1303 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 TTLL13PA6NNM8 815 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 LMNB1P20700 586 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 GPTP24298 496 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 HOXA10P31260 410 aaPredicted RBP11.39□□□□□ -0.59
LINC00963-204ENST00000427778 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
LINC00963-204ENST00000427778 TCIRG1Q13488 830 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 CCDC30Q5VVM6 783 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 SUSD4Q5VX71 490 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 ANKRD13DQ6ZTN6 518 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 NLRP10Q86W26 655 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 TSPYL6Q8N831 410 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 ABHD8Q96I13 439 aa11.39□□□□□ -0.59
LINC00963-204ENST00000427778 SNED1Q8TER0 1413 aa11.38□□□□□ -0.59
LINC00963-204ENST00000427778 AIMP1Q12904 312 aaKnown RBP11.38□□□□□ -0.59
LINC00963-204ENST00000427778 TWISTNBQ3B726 338 aaPredicted RBP11.38□□□□□ -0.59
LINC00963-204ENST00000427778 ERFEQ4G0M1 354 aa11.38□□□□□ -0.59
LINC00963-204ENST00000427778 SOGA3Q5TF21 947 aa11.38□□□□□ -0.59
LINC00963-204ENST00000427778 PRPF40BQ6NWY9 871 aaKnown RBP11.38□□□□□ -0.59
LINC00963-204ENST00000427778 C7orf43Q8WVR3 580 aa11.38□□□□□ -0.59
LINC00963-204ENST00000427778 ZNF622Q969S3 477 aaKnown RBP eCLIP11.38□□□□□ -0.59
LINC00963-204ENST00000427778 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
LINC00963-204ENST00000427778 MYH3P11055 1940 aa11.37□□□□□ -0.59
LINC00963-204ENST00000427778 NFKBIEO00221 500 aa11.37□□□□□ -0.59
LINC00963-204ENST00000427778 ELL2O00472 640 aaPredicted RBP11.37□□□□□ -0.59
LINC00963-204ENST00000427778 GTF2E1P29083 439 aaPredicted RBP11.37□□□□□ -0.59
LINC00963-204ENST00000427778 MLLT1Q03111 559 aaPredicted RBP11.37□□□□□ -0.59
LINC00963-204ENST00000427778 NUTM1Q86Y26 1132 aa11.37□□□□□ -0.59
LINC00963-204ENST00000427778 MIER1Q8N108 512 aa11.37□□□□□ -0.59
LINC00963-204ENST00000427778 SLAIN1Q8ND83 568 aa11.37□□□□□ -0.59
LINC00963-204ENST00000427778 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
LINC00963-204ENST00000427778 MYH16Q9H6N6 1097 aa11.37□□□□□ -0.59
LINC00963-204ENST00000427778 LRRC37AA6NMS7 1700 aa11.37□□□□□ -0.59
LINC00963-204ENST00000427778 ADAMTSL1Q8N6G6 1762 aa11.36□□□□□ -0.59
LINC00963-204ENST00000427778 FAM177BA6PVY3 158 aa11.36□□□□□ -0.59
LINC00963-204ENST00000427778 ALDH1B1P30837 517 aa11.36□□□□□ -0.59
LINC00963-204ENST00000427778 LBX1P52954 281 aa11.36□□□□□ -0.59
LINC00963-204ENST00000427778 GOLGA2Q08379 1002 aa11.36□□□□□ -0.59
LINC00963-204ENST00000427778 IER5LQ5T953 404 aa11.36□□□□□ -0.59
LINC00963-204ENST00000427778 TNRC18O15417 2968 aaPredicted RBP11.36□□□□□ -0.59
LINC00963-204ENST00000427778 TRPM7Q96QT4 1865 aa11.36□□□□□ -0.59
LINC00963-204ENST00000427778 SH3TC1Q8TE82 1336 aa11.35□□□□□ -0.59
LINC00963-204ENST00000427778 PDE4DIPQ5VU43 2346 aa11.35□□□□□ -0.59
LINC00963-204ENST00000427778 POTECB2RU33 542 aa11.35□□□□□ -0.59
LINC00963-204ENST00000427778 C21orf2O43822 256 aa11.35□□□□□ -0.59
LINC00963-204ENST00000427778 DDX58O95786 925 aaKnown RBP11.35□□□□□ -0.59
LINC00963-204ENST00000427778 CRAMP1Q96RY5 1269 aa11.35□□□□□ -0.59
LINC00963-204ENST00000427778 STK31Q9BXU1 1019 aa11.35□□□□□ -0.59
LINC00963-204ENST00000427778 PHAXQ9H814 394 aaKnown RBP11.35□□□□□ -0.59
LINC00963-204ENST00000427778 TAF1P21675 1872 aa11.34□□□□□ -0.59
LINC00963-204ENST00000427778 VAMP4O75379 141 aa11.34□□□□□ -0.59
LINC00963-204ENST00000427778 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
LINC00963-204ENST00000427778 NLRP3Q96P20 1036 aa11.34□□□□□ -0.59
LINC00963-204ENST00000427778 TRMT112Q9UI30 125 aaKnown RBP11.34□□□□□ -0.59
LINC00963-204ENST00000427778 EXOSC9Q06265 439 aaKnown RBP11.33□□□□□ -0.6
LINC00963-204ENST00000427778 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
LINC00963-204ENST00000427778 CCDC93Q567U6 631 aa11.33□□□□□ -0.6
LINC00963-204ENST00000427778 CC2D2BQ6DHV5 1058 aa11.33□□□□□ -0.6
LINC00963-204ENST00000427778 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
LINC00963-204ENST00000427778 KSR2Q6VAB6 950 aa11.33□□□□□ -0.6
LINC00963-204ENST00000427778 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
LINC00963-204ENST00000427778 RIC3Q7Z5B4 369 aa11.33□□□□□ -0.6
LINC00963-204ENST00000427778 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
LINC00963-204ENST00000427778 RPGRQ92834 1020 aaKnown RBP11.33□□□□□ -0.6
LINC00963-204ENST00000427778 METTL22Q9BUU2 404 aaPredicted RBP11.33□□□□□ -0.6
LINC00963-204ENST00000427778 TAOK3Q9H2K8 898 aa11.33□□□□□ -0.6
LINC00963-204ENST00000427778 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
LINC00963-204ENST00000427778 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
LINC00963-204ENST00000427778 ST18O60284 1047 aa11.32□□□□□ -0.6
LINC00963-204ENST00000427778 HSPA8P11142 646 aaKnown RBP11.32□□□□□ -0.6
LINC00963-204ENST00000427778 VEGFBP49765 207 aa11.32□□□□□ -0.6
LINC00963-204ENST00000427778 RTKN2Q8IZC4 609 aa11.32□□□□□ -0.6
LINC00963-204ENST00000427778 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
LINC00963-204ENST00000427778 WBP1LQ9NX94 342 aa11.32□□□□□ -0.6
LINC00963-204ENST00000427778 PCDHB13Q9Y5F0 798 aa11.32□□□□□ -0.6
LINC00963-204ENST00000427778 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
LINC00963-204ENST00000427778 CCDC85CA6NKD9 419 aa11.31□□□□□ -0.6
LINC00963-204ENST00000427778 E9PSI1 815 aa11.31□□□□□ -0.6
LINC00963-204ENST00000427778 ATP5J2-PTCD1G3V325 749 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms