RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 C9orf78Q9NZ63 289 aaPredicted RBP10.34□□□□□ -0.75
SMARCAL1-206ENST00000427645 MAP3K15Q6ZN16 1313 aa10.33□□□□□ -0.76
SMARCAL1-206ENST00000427645 GNAI2P04899 355 aa10.33□□□□□ -0.76
SMARCAL1-206ENST00000427645 TRIM28Q13263 835 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-206ENST00000427645 TCIRG1Q13488 830 aa10.33□□□□□ -0.76
SMARCAL1-206ENST00000427645 TTLL7Q6ZT98 887 aa10.33□□□□□ -0.76
SMARCAL1-206ENST00000427645 MYD88Q99836 296 aa10.33□□□□□ -0.76
SMARCAL1-206ENST00000427645 USP44Q9H0E7 712 aa10.33□□□□□ -0.76
SMARCAL1-206ENST00000427645 AFDNP55196 1824 aaKnown RBP10.33□□□□□ -0.76
SMARCAL1-206ENST00000427645 NPHP1O15259 732 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 CAMTA2O94983 1202 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 UBTFL1P0CB47 393 aaPredicted RBP10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 POTEIP0CG38 1075 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 POTEJP0CG39 1038 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 ERFEQ4G0M1 354 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 CLEC4GQ6UXB4 293 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 GIGYF2Q6Y7W6 1299 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 CENPQQ7L2Z9 268 aaPredicted RBP10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 DZIP3Q86Y13 1208 aaKnown RBP10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 CCDC191Q8NCU4 936 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 BRIP1Q9BX63 1249 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 ZNF652Q9Y2D9 606 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 UTYO14607 1347 aa10.32□□□□□ -0.76
SMARCAL1-206ENST00000427645 NRXN2Q9P2S2 1712 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 NEURL1BA8MQ27 555 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 GRM8O00222 908 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 DDNO94850 711 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 PDE6BP35913 854 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 HDAC1Q13547 482 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 GCKRQ14397 625 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 CNBD1Q8NA66 436 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 SETDB2Q96T68 719 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 MEIS3Q99687 375 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 ZBTB3Q9H5J0 574 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 CWC25Q9NXE8 425 aaPredicted RBP10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 PCDHB15Q9Y5E8 787 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 SBF1O95248 1867 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
SMARCAL1-206ENST00000427645 FAM177BA6PVY3 158 aa10.3□□□□□ -0.76
SMARCAL1-206ENST00000427645 HMMRO75330 724 aa10.3□□□□□ -0.76
SMARCAL1-206ENST00000427645 IGKV5-2P06315 115 aa10.3□□□□□ -0.76
SMARCAL1-206ENST00000427645 CWF19L2Q2TBE0 894 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-206ENST00000427645 DPY19L2Q6NUT2 758 aa10.3□□□□□ -0.76
SMARCAL1-206ENST00000427645 OLFM4Q6UX06 510 aa10.3□□□□□ -0.76
SMARCAL1-206ENST00000427645 ISCA1Q9BUE6 129 aa10.3□□□□□ -0.76
SMARCAL1-206ENST00000427645 ZC3H4Q9UPT8 1303 aaKnown RBP10.3□□□□□ -0.76
SMARCAL1-206ENST00000427645 TNRC6CQ9HCJ0 1690 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 ATP5J2-PTCD1G3V325 749 aa10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 HSPA1AP0DMV8 641 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 HSPA1BP0DMV9 641 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 ATP8B2P98198 1209 aa10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 PRPF40BQ6NWY9 871 aaKnown RBP10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 TNS4Q8IZW8 715 aa10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 ANKRD44Q8N8A2 993 aa10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 GCC1Q96CN9 775 aa10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 TAOK3Q9H2K8 898 aa10.29□□□□□ -0.76
SMARCAL1-206ENST00000427645 NUP98P52948 1817 aa10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 H7C1W4 665 aa10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 IGHDP01880 384 aa10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 NBPF7P0C2Y1 421 aaPredicted RBP10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 SRGNP10124 158 aa10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 HSP90B1P14625 803 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 ST5P78524 1137 aa10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 HLFQ16534 295 aa10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 CEP85Q6P2H3 762 aa10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 ZNF34Q8IZ26 560 aa10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 MKRN1Q9UHC7 482 aaKnown RBP10.28□□□□□ -0.76
SMARCAL1-206ENST00000427645 PARP10Q53GL7 1025 aa10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 PPP1R42Q7Z4L9 355 aa10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 CNKSR1Q969H4 720 aa10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 MASTLQ96GX5 879 aa10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 C1orf115Q9H7X2 142 aa10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 ANKRD31Q8N7Z5 1873 aa10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 COL11A2P13942 1736 aaPredicted RBP10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 TIAM2Q8IVF5 1701 aa10.27□□□□□ -0.77
SMARCAL1-206ENST00000427645 DLEC1Q9Y238 1755 aa10.26□□□□□ -0.77
SMARCAL1-206ENST00000427645 PCCAP05165 728 aaPredicted RBP10.26□□□□□ -0.77
SMARCAL1-206ENST00000427645 MTX1Q13505 466 aa10.26□□□□□ -0.77
SMARCAL1-206ENST00000427645 STYK1Q6J9G0 422 aa10.26□□□□□ -0.77
SMARCAL1-206ENST00000427645 CHADLQ6NUI6 762 aa10.26□□□□□ -0.77
SMARCAL1-206ENST00000427645 NLRP10Q86W26 655 aa10.26□□□□□ -0.77
SMARCAL1-206ENST00000427645 ZBTB38Q8NAP3 1195 aaPredicted RBP10.26□□□□□ -0.77
SMARCAL1-206ENST00000427645 C7orf43Q8WVR3 580 aa10.26□□□□□ -0.77
SMARCAL1-206ENST00000427645 ZNF277Q9NRM2 450 aaPredicted RBP10.26□□□□□ -0.77
SMARCAL1-206ENST00000427645 ANKRD36CQ5JPF3 1778 aa10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 HSP90AB4PQ58FF6 505 aa10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 UBE3BQ7Z3V4 1068 aa10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 SLC51AQ86UW1 340 aa10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 SIRT2Q8IXJ6 389 aa10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 SMC5Q8IY18 1101 aa10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 SSH3Q8TE77 659 aa10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 UTP14AQ9BVJ6 771 aaKnown RBP10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 DCTPP1Q9H773 170 aa10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 TRMT112Q9UI30 125 aaKnown RBP10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 NIP7Q9Y221 180 aaKnown RBP eCLIP10.25□□□□□ -0.77
SMARCAL1-206ENST00000427645 SCN7AQ01118 1682 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms