RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 ZBTB38Q8NAP3 1195 aaPredicted RBP20.62■□□□□ 0.89
HLA-DQB2-230ENST00000427449 TRPM7Q96QT4 1865 aa20.61■□□□□ 0.89
HLA-DQB2-230ENST00000427449 PCCAP05165 728 aaPredicted RBP20.61■□□□□ 0.89
HLA-DQB2-230ENST00000427449 APLP1P51693 650 aa20.61■□□□□ 0.89
HLA-DQB2-230ENST00000427449 RTL5Q5HYW3 569 aaPredicted RBP20.61■□□□□ 0.89
HLA-DQB2-230ENST00000427449 RIC3Q7Z5B4 369 aa20.61■□□□□ 0.89
HLA-DQB2-230ENST00000427449 SP8Q8IXZ3 490 aa20.61■□□□□ 0.89
HLA-DQB2-230ENST00000427449 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
HLA-DQB2-230ENST00000427449 SMC1BQ8NDV3 1235 aa20.61■□□□□ 0.89
HLA-DQB2-230ENST00000427449 MAP3K2Q9Y2U5 619 aa20.61■□□□□ 0.89
HLA-DQB2-230ENST00000427449 PI4KAP2A4QPH2 592 aa20.6■□□□□ 0.89
HLA-DQB2-230ENST00000427449 IRS4O14654 1257 aaPredicted RBP20.6■□□□□ 0.89
HLA-DQB2-230ENST00000427449 GRIPAP1Q4V328 841 aa20.6■□□□□ 0.89
HLA-DQB2-230ENST00000427449 DPY19L2Q6NUT2 758 aa20.6■□□□□ 0.89
HLA-DQB2-230ENST00000427449 KSR2Q6VAB6 950 aa20.6■□□□□ 0.89
HLA-DQB2-230ENST00000427449 PI4KAP1Q8N8J0 262 aa20.6■□□□□ 0.89
HLA-DQB2-230ENST00000427449 TAF1DQ9H5J8 278 aaPredicted RBP20.6■□□□□ 0.89
HLA-DQB2-230ENST00000427449 CDHR2Q9BYE9 1310 aa20.59■□□□□ 0.89
HLA-DQB2-230ENST00000427449 BBOX1O75936 387 aa20.59■□□□□ 0.89
HLA-DQB2-230ENST00000427449 SCNN1DP51172 638 aa20.59■□□□□ 0.89
HLA-DQB2-230ENST00000427449 CASP7P55210 303 aa20.59■□□□□ 0.89
HLA-DQB2-230ENST00000427449 EXOSC9Q06265 439 aaKnown RBP20.59■□□□□ 0.89
HLA-DQB2-230ENST00000427449 AOC3Q16853 763 aa20.59■□□□□ 0.89
HLA-DQB2-230ENST00000427449 SALL2Q9Y467 1007 aaPredicted RBP20.59■□□□□ 0.89
HLA-DQB2-230ENST00000427449 FAM9BQ8IZU0 186 aa20.58■□□□□ 0.89
HLA-DQB2-230ENST00000427449 JARID2Q92833 1246 aaPredicted RBP20.58■□□□□ 0.89
HLA-DQB2-230ENST00000427449 SEC31BQ9NQW1 1179 aa20.58■□□□□ 0.89
HLA-DQB2-230ENST00000427449 PASKQ96RG2 1323 aa20.57■□□□□ 0.88
HLA-DQB2-230ENST00000427449 THSD7BQ9C0I4 1608 aa20.57■□□□□ 0.88
HLA-DQB2-230ENST00000427449 NEURL1BA8MQ27 555 aa20.57■□□□□ 0.88
HLA-DQB2-230ENST00000427449 CWF19L2Q2TBE0 894 aaKnown RBP20.57■□□□□ 0.88
HLA-DQB2-230ENST00000427449 DDX46Q7L014 1031 aaKnown RBP20.57■□□□□ 0.88
HLA-DQB2-230ENST00000427449 C16orf71Q8IYS4 520 aaPredicted RBP20.57■□□□□ 0.88
HLA-DQB2-230ENST00000427449 GPC2Q8N158 579 aa20.57■□□□□ 0.88
HLA-DQB2-230ENST00000427449 CWC25Q9NXE8 425 aaPredicted RBP20.57■□□□□ 0.88
HLA-DQB2-230ENST00000427449 YDJCA8MPS7 323 aa20.56■□□□□ 0.88
HLA-DQB2-230ENST00000427449 KIAA2012Q0VF49 1180 aa20.56■□□□□ 0.88
HLA-DQB2-230ENST00000427449 FLIIQ13045 1269 aa20.56■□□□□ 0.88
HLA-DQB2-230ENST00000427449 RTL9Q8NET4 1388 aa20.56■□□□□ 0.88
HLA-DQB2-230ENST00000427449 SLC4A2P04920 1241 aa20.55■□□□□ 0.88
HLA-DQB2-230ENST00000427449 VPS33BQ9H267 617 aa20.55■□□□□ 0.88
HLA-DQB2-230ENST00000427449 PPIP5K2O43314 1243 aa20.54■□□□□ 0.88
HLA-DQB2-230ENST00000427449 TMC4Q7Z404 712 aa20.54■□□□□ 0.88
HLA-DQB2-230ENST00000427449 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
HLA-DQB2-230ENST00000427449 DDX58O95786 925 aaKnown RBP20.53■□□□□ 0.88
HLA-DQB2-230ENST00000427449 ITGBL1O95965 494 aaPredicted RBP20.53■□□□□ 0.88
HLA-DQB2-230ENST00000427449 GPSM2P81274 684 aa20.53■□□□□ 0.88
HLA-DQB2-230ENST00000427449 CHADLQ6NUI6 762 aa20.53■□□□□ 0.88
HLA-DQB2-230ENST00000427449 DPP8Q6V1X1 898 aaPredicted RBP20.53■□□□□ 0.88
HLA-DQB2-230ENST00000427449 MPNDQ8N594 471 aa20.53■□□□□ 0.88
HLA-DQB2-230ENST00000427449 POLLQ9UGP5 575 aa20.53■□□□□ 0.88
HLA-DQB2-230ENST00000427449 IQCA1LA6NCM1 817 aa20.52■□□□□ 0.88
HLA-DQB2-230ENST00000427449 H7C1W4 665 aa20.52■□□□□ 0.88
HLA-DQB2-230ENST00000427449 PDE8AO60658 829 aa20.52■□□□□ 0.88
HLA-DQB2-230ENST00000427449 EPHX2P34913 555 aa20.52■□□□□ 0.88
HLA-DQB2-230ENST00000427449 CXCL9Q07325 125 aa20.52■□□□□ 0.88
HLA-DQB2-230ENST00000427449 STK31Q9BXU1 1019 aa20.52■□□□□ 0.88
HLA-DQB2-230ENST00000427449 HACL1Q9UJ83 578 aa20.52■□□□□ 0.88
HLA-DQB2-230ENST00000427449 POLR2AP24928 1970 aaKnown RBP20.52■□□□□ 0.87
HLA-DQB2-230ENST00000427449 CTSWP56202 376 aa20.51■□□□□ 0.87
HLA-DQB2-230ENST00000427449 LDHDQ86WU2 507 aa20.51■□□□□ 0.87
HLA-DQB2-230ENST00000427449 JMYQ8N9B5 988 aa20.51■□□□□ 0.87
HLA-DQB2-230ENST00000427449 JDP2Q8WYK2 163 aa20.51■□□□□ 0.87
HLA-DQB2-230ENST00000427449 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
HLA-DQB2-230ENST00000427449 ZNF609O15014 1411 aa20.51■□□□□ 0.87
HLA-DQB2-230ENST00000427449 EPS15P42566 896 aa20.5■□□□□ 0.87
HLA-DQB2-230ENST00000427449 RPS8P62241 208 aaKnown RBP20.5■□□□□ 0.87
HLA-DQB2-230ENST00000427449 GCKRQ14397 625 aa20.5■□□□□ 0.87
HLA-DQB2-230ENST00000427449 NIM1KQ8IY84 436 aa20.5■□□□□ 0.87
HLA-DQB2-230ENST00000427449 TTLL11Q8NHH1 800 aa20.5■□□□□ 0.87
HLA-DQB2-230ENST00000427449 KLRG1Q96E93 195 aa20.5■□□□□ 0.87
HLA-DQB2-230ENST00000427449 GPR101Q96P66 508 aaPredicted RBP20.5■□□□□ 0.87
HLA-DQB2-230ENST00000427449 PLA2G12BQ9BX93 195 aa20.5■□□□□ 0.87
HLA-DQB2-230ENST00000427449 CHMP4AQ9BY43 222 aa20.5■□□□□ 0.87
HLA-DQB2-230ENST00000427449 SUPT20HQ8NEM7 779 aa20.49■□□□□ 0.87
HLA-DQB2-230ENST00000427449 DNAAF4Q8WXU2 420 aa20.49■□□□□ 0.87
HLA-DQB2-230ENST00000427449 ZNRF3Q9ULT6 936 aa20.49■□□□□ 0.87
HLA-DQB2-230ENST00000427449 WTIPA6NIX2 430 aaPredicted RBP20.48■□□□□ 0.87
HLA-DQB2-230ENST00000427449 TBC1D16Q8TBP0 767 aa20.48■□□□□ 0.87
HLA-DQB2-230ENST00000427449 GREM2Q9H772 168 aa20.48■□□□□ 0.87
HLA-DQB2-230ENST00000427449 SHTN1A0MZ66 631 aa20.47■□□□□ 0.87
HLA-DQB2-230ENST00000427449 F6X3S4 739 aa20.47■□□□□ 0.87
HLA-DQB2-230ENST00000427449 EIF6P56537 245 aaKnown RBP20.47■□□□□ 0.87
HLA-DQB2-230ENST00000427449 BEND3Q5T5X7 828 aa20.47■□□□□ 0.87
HLA-DQB2-230ENST00000427449 UBE3BQ7Z3V4 1068 aa20.47■□□□□ 0.87
HLA-DQB2-230ENST00000427449 LINS1Q8NG48 757 aa20.47■□□□□ 0.87
HLA-DQB2-230ENST00000427449 CCDC85AQ96PX6 553 aaPredicted RBP20.47■□□□□ 0.87
HLA-DQB2-230ENST00000427449 GPRC5DQ9NZD1 345 aa20.47■□□□□ 0.87
HLA-DQB2-230ENST00000427449 FKBP5Q13451 457 aaPredicted RBP20.46■□□□□ 0.87
HLA-DQB2-230ENST00000427449 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
HLA-DQB2-230ENST00000427449 TRMT2AQ8IZ69 625 aaKnown RBP20.46■□□□□ 0.87
HLA-DQB2-230ENST00000427449 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
HLA-DQB2-230ENST00000427449 KCNQ5Q9NR82 932 aa20.46■□□□□ 0.87
HLA-DQB2-230ENST00000427449 GJA3Q9Y6H8 435 aa20.46■□□□□ 0.87
HLA-DQB2-230ENST00000427449 ARAP2Q8WZ64 1704 aa20.45■□□□□ 0.86
HLA-DQB2-230ENST00000427449 CSF1RP07333 972 aa20.45■□□□□ 0.86
HLA-DQB2-230ENST00000427449 GMPSP49915 693 aaPredicted RBP20.44■□□□□ 0.86
HLA-DQB2-230ENST00000427449 NSFL1CQ9UNZ2 370 aaKnown RBP20.44■□□□□ 0.86
HLA-DQB2-230ENST00000427449 IRS2Q9Y4H2 1338 aa20.44■□□□□ 0.86
HLA-DQB2-230ENST00000427449 RAD17O75943 681 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms