RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 EPS15P42566 896 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 AOC3Q16853 763 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 CNTROBQ8N137 903 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 ISCA1Q9BUE6 129 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 MBIPQ9NS73 344 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 TRMT112Q9UI30 125 aaKnown RBP13.11□□□□□ -0.31
GACAT3-201ENST00000426539 BBOX1O75936 387 aa13.1□□□□□ -0.31
GACAT3-201ENST00000426539 DUSP27Q5VZP5 1158 aa13.1□□□□□ -0.31
GACAT3-201ENST00000426539 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
GACAT3-201ENST00000426539 NIM1KQ8IY84 436 aa13.1□□□□□ -0.31
GACAT3-201ENST00000426539 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
GACAT3-201ENST00000426539 APAF1O14727 1248 aa13.09□□□□□ -0.31
GACAT3-201ENST00000426539 VEGFBP49765 207 aa13.09□□□□□ -0.31
GACAT3-201ENST00000426539 FMR1Q06787 632 aaKnown RBP eCLIP13.09□□□□□ -0.31
GACAT3-201ENST00000426539 GRAPQ13588 217 aa13.09□□□□□ -0.31
GACAT3-201ENST00000426539 ANKRD13DQ6ZTN6 518 aa13.09□□□□□ -0.31
GACAT3-201ENST00000426539 GRAPLQ8TC17 118 aaPredicted RBP13.09□□□□□ -0.31
GACAT3-201ENST00000426539 VPS33BQ9H267 617 aa13.09□□□□□ -0.31
GACAT3-201ENST00000426539 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
GACAT3-201ENST00000426539 ANKRD36CQ5JPF3 1778 aa13.08□□□□□ -0.32
GACAT3-201ENST00000426539 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
GACAT3-201ENST00000426539 CXCL9Q07325 125 aa13.08□□□□□ -0.32
GACAT3-201ENST00000426539 DPP8Q6V1X1 898 aaPredicted RBP13.08□□□□□ -0.32
GACAT3-201ENST00000426539 DDX46Q7L014 1031 aaKnown RBP13.08□□□□□ -0.32
GACAT3-201ENST00000426539 MPNDQ8N594 471 aa13.08□□□□□ -0.32
GACAT3-201ENST00000426539 FAM89AQ96GI7 184 aa13.08□□□□□ -0.32
GACAT3-201ENST00000426539 ZNRF3Q9ULT6 936 aa13.08□□□□□ -0.32
GACAT3-201ENST00000426539 LAMB2P55268 1798 aa13.07□□□□□ -0.32
GACAT3-201ENST00000426539 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
GACAT3-201ENST00000426539 SF3B3Q15393 1217 aaKnown RBP13.07□□□□□ -0.32
GACAT3-201ENST00000426539 TNS4Q8IZW8 715 aa13.07□□□□□ -0.32
GACAT3-201ENST00000426539 SUPT20HQ8NEM7 779 aa13.07□□□□□ -0.32
GACAT3-201ENST00000426539 HYPKQ9NX55 129 aa13.07□□□□□ -0.32
GACAT3-201ENST00000426539 GPRC5DQ9NZD1 345 aa13.07□□□□□ -0.32
GACAT3-201ENST00000426539 COL4A1P02462 1669 aa13.07□□□□□ -0.32
GACAT3-201ENST00000426539 PCNTO95613 3336 aa13.07□□□□□ -0.32
GACAT3-201ENST00000426539 DUOX1Q9NRD9 1551 aa13.07□□□□□ -0.32
GACAT3-201ENST00000426539 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
GACAT3-201ENST00000426539 FOXN1O15353 648 aa13.06□□□□□ -0.32
GACAT3-201ENST00000426539 TRIM28Q13263 835 aaKnown RBP13.06□□□□□ -0.32
GACAT3-201ENST00000426539 USP50Q70EL3 339 aaPredicted RBP13.06□□□□□ -0.32
GACAT3-201ENST00000426539 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
GACAT3-201ENST00000426539 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
GACAT3-201ENST00000426539 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
GACAT3-201ENST00000426539 IFT57Q9NWB7 429 aa13.06□□□□□ -0.32
GACAT3-201ENST00000426539 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
GACAT3-201ENST00000426539 YDJCA8MPS7 323 aa13.05□□□□□ -0.32
GACAT3-201ENST00000426539 TRAF5O00463 557 aa13.05□□□□□ -0.32
GACAT3-201ENST00000426539 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
GACAT3-201ENST00000426539 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
GACAT3-201ENST00000426539 GMPSP49915 693 aaPredicted RBP13.05□□□□□ -0.32
GACAT3-201ENST00000426539 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
GACAT3-201ENST00000426539 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
GACAT3-201ENST00000426539 RTL5Q5HYW3 569 aaPredicted RBP13.05□□□□□ -0.32
GACAT3-201ENST00000426539 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
GACAT3-201ENST00000426539 RAD17O75943 681 aa13.04□□□□□ -0.32
GACAT3-201ENST00000426539 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
GACAT3-201ENST00000426539 CST9Q5W186 159 aa13.04□□□□□ -0.32
GACAT3-201ENST00000426539 CIAPIN1Q6FI81 312 aa13.04□□□□□ -0.32
GACAT3-201ENST00000426539 ADARB2Q9NS39 739 aaKnown RBP13.04□□□□□ -0.32
GACAT3-201ENST00000426539 DDX60Q8IY21 1712 aaKnown RBP13.04□□□□□ -0.32
GACAT3-201ENST00000426539 TAF1P21675 1872 aa13.04□□□□□ -0.32
GACAT3-201ENST00000426539 SHTN1A0MZ66 631 aa13.03□□□□□ -0.32
GACAT3-201ENST00000426539 IRS4O14654 1257 aaPredicted RBP13.03□□□□□ -0.32
GACAT3-201ENST00000426539 HIRAP54198 1017 aaPredicted RBP13.03□□□□□ -0.32
GACAT3-201ENST00000426539 GNAI1P63096 354 aa13.03□□□□□ -0.32
GACAT3-201ENST00000426539 GPSM2P81274 684 aa13.03□□□□□ -0.32
GACAT3-201ENST00000426539 TMC4Q7Z404 712 aa13.03□□□□□ -0.32
GACAT3-201ENST00000426539 WBP1LQ9NX94 342 aa13.03□□□□□ -0.32
GACAT3-201ENST00000426539 POLLQ9UGP5 575 aa13.03□□□□□ -0.32
GACAT3-201ENST00000426539 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.32
GACAT3-201ENST00000426539 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
GACAT3-201ENST00000426539 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
GACAT3-201ENST00000426539 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
GACAT3-201ENST00000426539 ZBTB38Q8NAP3 1195 aaPredicted RBP13.02□□□□□ -0.33
GACAT3-201ENST00000426539 TRPM4Q8TD43 1214 aa13.02□□□□□ -0.33
GACAT3-201ENST00000426539 MYD88Q99836 296 aa13.02□□□□□ -0.33
GACAT3-201ENST00000426539 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
GACAT3-201ENST00000426539 ABT1Q9ULW3 272 aaKnown RBP13.02□□□□□ -0.33
GACAT3-201ENST00000426539 NSFL1CQ9UNZ2 370 aaKnown RBP13.02□□□□□ -0.33
GACAT3-201ENST00000426539 WDR33Q9C0J8 1336 aaKnown RBP13.02□□□□□ -0.33
GACAT3-201ENST00000426539 CALD1Q05682 793 aaKnown RBP13.01□□□□□ -0.33
GACAT3-201ENST00000426539 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
GACAT3-201ENST00000426539 TNIP1Q15025 636 aa13.01□□□□□ -0.33
GACAT3-201ENST00000426539 JARID2Q92833 1246 aaPredicted RBP13.01□□□□□ -0.33
GACAT3-201ENST00000426539 GPR101Q96P66 508 aaPredicted RBP13.01□□□□□ -0.33
GACAT3-201ENST00000426539 SEC31BQ9NQW1 1179 aa13.01□□□□□ -0.33
GACAT3-201ENST00000426539 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
GACAT3-201ENST00000426539 RIMBP2O15034 1052 aa13□□□□□ -0.33
GACAT3-201ENST00000426539 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
GACAT3-201ENST00000426539 WASHC4Q2M389 1173 aa13□□□□□ -0.33
GACAT3-201ENST00000426539 BCL2L13Q9BXK5 485 aa13□□□□□ -0.33
GACAT3-201ENST00000426539 GLIS2Q9BZE0 524 aaPredicted RBP13□□□□□ -0.33
GACAT3-201ENST00000426539 DBNDD1Q9H9R9 158 aa13□□□□□ -0.33
GACAT3-201ENST00000426539 PRDM10Q9NQV6 1147 aa13□□□□□ -0.33
GACAT3-201ENST00000426539 KCNQ5Q9NR82 932 aa13□□□□□ -0.33
GACAT3-201ENST00000426539 CNOT7Q9UIV1 285 aaKnown RBP13□□□□□ -0.33
GACAT3-201ENST00000426539 RTL9Q8NET4 1388 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms