RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 PIK3C2AO00443 1686 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 KCPQ6ZWJ8 1503 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 PPIP5K1Q6PFW1 1433 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 ZBBXA8MT70 800 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 EXOC5O00471 708 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 ADH1BP00325 375 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 CTHP32929 405 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 NLRP13Q86W25 1043 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 NUDT12Q9BQG2 462 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 CDCA7Q9BWT1 371 aaPredicted RBP8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 PPP1R12CQ9BZL4 782 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 MAP10Q9P2G4 905 aa8.65□□□□□ -1.02
NIF3L1-207ENST00000426253 TRPM1Q7Z4N2 1603 aa8.65□□□□□ -1.03
NIF3L1-207ENST00000426253 USP6P35125 1406 aa8.64□□□□□ -1.03
NIF3L1-207ENST00000426253 CPDO75976 1380 aa8.64□□□□□ -1.03
NIF3L1-207ENST00000426253 KCNQ4P56696 695 aa8.64□□□□□ -1.03
NIF3L1-207ENST00000426253 SLC27A3Q5K4L6 730 aa8.64□□□□□ -1.03
NIF3L1-207ENST00000426253 ARHGAP27Q6ZUM4 889 aa8.64□□□□□ -1.03
NIF3L1-207ENST00000426253 MTRQ99707 1265 aa8.64□□□□□ -1.03
NIF3L1-207ENST00000426253 GPSM3Q9Y4H4 160 aa8.64□□□□□ -1.03
NIF3L1-207ENST00000426253 PLEKHG2Q9H7P9 1386 aa8.63□□□□□ -1.03
NIF3L1-207ENST00000426253 TNRC6CQ9HCJ0 1690 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-207ENST00000426253 FBXO45P0C2W1 286 aa8.63□□□□□ -1.03
NIF3L1-207ENST00000426253 TJAP1Q5JTD0 557 aa8.63□□□□□ -1.03
NIF3L1-207ENST00000426253 PDXDC2PQ6P474 469 aa8.63□□□□□ -1.03
NIF3L1-207ENST00000426253 COL23A1Q86Y22 540 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-207ENST00000426253 CDAN1Q8IWY9 1227 aa8.63□□□□□ -1.03
NIF3L1-207ENST00000426253 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
NIF3L1-207ENST00000426253 IL21Q9HBE4 155 aa8.63□□□□□ -1.03
NIF3L1-207ENST00000426253 ST20-MTHFSA0A0A6YYL1 179 aa8.62□□□□□ -1.03
NIF3L1-207ENST00000426253 GCP02774 474 aa8.62□□□□□ -1.03
NIF3L1-207ENST00000426253 C9orf131Q5VYM1 1079 aa8.62□□□□□ -1.03
NIF3L1-207ENST00000426253 TRAIPQ9BWF2 469 aa8.62□□□□□ -1.03
NIF3L1-207ENST00000426253 BCS1LQ9Y276 419 aa8.62□□□□□ -1.03
NIF3L1-207ENST00000426253 C10orf71Q711Q0 1435 aa8.62□□□□□ -1.03
NIF3L1-207ENST00000426253 ITSN1Q15811 1721 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 PKD1L3Q7Z443 1732 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 PALM3A6NDB9 673 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 PTPN5P54829 565 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 PTK2Q05397 1052 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 PDE4CQ08493 712 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 CCER1Q8TC90 406 aaPredicted RBP8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 ZNF592Q92610 1267 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 PBXIP1Q96AQ6 731 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 SLC12A5Q9H2X9 1139 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 TFIP11Q9UBB9 837 aaKnown RBP8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 PXDNLA1KZ92 1463 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 QRICH2Q9H0J4 1663 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 KAT6BQ8WYB5 2073 aa8.61□□□□□ -1.03
NIF3L1-207ENST00000426253 TTC21BQ7Z4L5 1316 aa8.6□□□□□ -1.03
NIF3L1-207ENST00000426253 CLSPNQ9HAW4 1339 aa8.6□□□□□ -1.03
NIF3L1-207ENST00000426253 CSB-PGBD3P0DP91 1061 aa8.6□□□□□ -1.03
NIF3L1-207ENST00000426253 POTEGQ6S5H5 508 aa8.6□□□□□ -1.03
NIF3L1-207ENST00000426253 HDGFL2Q7Z4V5 671 aaPredicted RBP8.6□□□□□ -1.03
NIF3L1-207ENST00000426253 PUS7Q96PZ0 661 aaKnown RBP8.6□□□□□ -1.03
NIF3L1-207ENST00000426253 UCN2Q96RP3 112 aa8.6□□□□□ -1.03
NIF3L1-207ENST00000426253 SLC6A16Q9GZN6 736 aa8.6□□□□□ -1.03
NIF3L1-207ENST00000426253 PRDM9Q9NQV7 894 aa8.6□□□□□ -1.03
NIF3L1-207ENST00000426253 TLL1O43897 1013 aa8.59□□□□□ -1.03
NIF3L1-207ENST00000426253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.59□□□□□ -1.03
NIF3L1-207ENST00000426253 ZNF516Q92618 1163 aa8.59□□□□□ -1.03
NIF3L1-207ENST00000426253 TESK2Q96S53 571 aa8.59□□□□□ -1.03
NIF3L1-207ENST00000426253 TERF2IPQ9NYB0 399 aa8.59□□□□□ -1.03
NIF3L1-207ENST00000426253 KTN1Q86UP2 1357 aaKnown RBP8.59□□□□□ -1.03
NIF3L1-207ENST00000426253 SBNO2Q9Y2G9 1366 aa8.59□□□□□ -1.03
NIF3L1-207ENST00000426253 TNRC18O15417 2968 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-207ENST00000426253 WDR17Q8IZU2 1322 aa8.58□□□□□ -1.04
NIF3L1-207ENST00000426253 HSPA8P11142 646 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-207ENST00000426253 RFX1P22670 979 aa8.58□□□□□ -1.04
NIF3L1-207ENST00000426253 KCNH5Q8NCM2 988 aa8.58□□□□□ -1.04
NIF3L1-207ENST00000426253 TTC21AQ8NDW8 1320 aa8.57□□□□□ -1.04
NIF3L1-207ENST00000426253 CPSF1Q10570 1443 aaKnown RBP8.57□□□□□ -1.04
NIF3L1-207ENST00000426253 PDE4DIPQ5VU43 2346 aa8.57□□□□□ -1.04
NIF3L1-207ENST00000426253 LMOD1P29536 600 aaPredicted RBP8.57□□□□□ -1.04
NIF3L1-207ENST00000426253 RETREG2Q8NC44 543 aa8.57□□□□□ -1.04
NIF3L1-207ENST00000426253 NFATC2IPQ8NCF5 419 aa8.57□□□□□ -1.04
NIF3L1-207ENST00000426253 RNF181Q9P0P0 153 aa8.57□□□□□ -1.04
NIF3L1-207ENST00000426253 ABCC6O95255 1503 aa8.56□□□□□ -1.04
NIF3L1-207ENST00000426253 ATP9BO43861 1147 aa8.56□□□□□ -1.04
NIF3L1-207ENST00000426253 TMF1P82094 1093 aa8.56□□□□□ -1.04
NIF3L1-207ENST00000426253 PTCRAQ6ISU1 281 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-207ENST00000426253 SYTL4Q96C24 671 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-207ENST00000426253 UNC93B1Q9H1C4 597 aa8.56□□□□□ -1.04
NIF3L1-207ENST00000426253 CCNL1Q9UK58 526 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-207ENST00000426253 CNTNAP1P78357 1384 aa8.56□□□□□ -1.04
NIF3L1-207ENST00000426253 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 CDCA8Q53HL2 280 aa8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 ARHGEF25Q86VW2 580 aa8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 NME9Q86XW9 330 aa8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 CCDC24Q8N4L8 307 aa8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 OCSTAMPQ9BR26 566 aa8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 CARD10Q9BWT7 1032 aa8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 MAFBQ9Y5Q3 323 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 N4BP2Q86UW6 1770 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-207ENST00000426253 COL18A1P39060 1754 aa8.54□□□□□ -1.04
NIF3L1-207ENST00000426253 USP47Q96K76 1375 aa8.54□□□□□ -1.04
NIF3L1-207ENST00000426253 DLL1O00548 723 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms