RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 CRKLP46109 303 aaKnown RBP11.5□□□□□ -0.57
HMGB4-201ENST00000425537 RFX5P48382 616 aaPredicted RBP11.5□□□□□ -0.57
HMGB4-201ENST00000425537 EIF5P55010 431 aaKnown RBP11.5□□□□□ -0.57
HMGB4-201ENST00000425537 FOXO4P98177 505 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 PTPN12Q05209 780 aaKnown RBP11.5□□□□□ -0.57
HMGB4-201ENST00000425537 RABEP1Q15276 862 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 CCDC57Q2TAC2 916 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 EPHA10Q5JZY3 1008 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 PI4K2BQ8TCG2 481 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 SNX21Q969T3 373 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 EVI5LQ96CN4 794 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 ESYT1Q9BSJ8 1104 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 SIL1Q9H173 461 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 ZBTB1Q9Y2K1 713 aa11.5□□□□□ -0.57
HMGB4-201ENST00000425537 SASH1O94885 1247 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 CHMLP26374 656 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 KIAA1211Q6ZU35 1233 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 NLRP10Q86W26 655 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 USP26Q9BXU7 913 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 PDGFDQ9GZP0 370 aaPredicted RBP11.49□□□□□ -0.57
HMGB4-201ENST00000425537 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 AKAP2Q9Y2D5 859 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 NUP98P52948 1817 aa11.49□□□□□ -0.57
HMGB4-201ENST00000425537 EYA2O00167 538 aa11.48□□□□□ -0.57
HMGB4-201ENST00000425537 PHF14O94880 888 aa11.48□□□□□ -0.57
HMGB4-201ENST00000425537 ANAPC15P60006 121 aa11.48□□□□□ -0.57
HMGB4-201ENST00000425537 IFIT5Q13325 482 aaKnown RBP11.48□□□□□ -0.57
HMGB4-201ENST00000425537 TNNI3KQ59H18 835 aa11.48□□□□□ -0.57
HMGB4-201ENST00000425537 RC3H1Q5TC82 1133 aaKnown RBP11.48□□□□□ -0.57
HMGB4-201ENST00000425537 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
HMGB4-201ENST00000425537 FPGT-TNNI3KV9GXZ4 949 aa11.48□□□□□ -0.57
HMGB4-201ENST00000425537 COL5A3P25940 1745 aaPredicted RBP11.48□□□□□ -0.57
HMGB4-201ENST00000425537 CNTNAP4Q9C0A0 1308 aa11.47□□□□□ -0.57
HMGB4-201ENST00000425537 PDE8AO60658 829 aa11.47□□□□□ -0.57
HMGB4-201ENST00000425537 INTS5Q6P9B9 1019 aaKnown RBP11.47□□□□□ -0.57
HMGB4-201ENST00000425537 CLEC4GQ6UXB4 293 aa11.47□□□□□ -0.57
HMGB4-201ENST00000425537 ZNF34Q8IZ26 560 aa11.47□□□□□ -0.57
HMGB4-201ENST00000425537 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
HMGB4-201ENST00000425537 STK32BQ9NY57 414 aa11.47□□□□□ -0.57
HMGB4-201ENST00000425537 CEP126Q9P2H0 1117 aa11.47□□□□□ -0.57
HMGB4-201ENST00000425537 TRMT112Q9UI30 125 aaKnown RBP11.47□□□□□ -0.57
HMGB4-201ENST00000425537 RFX7Q2KHR2 1363 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 RAD50Q92878 1312 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 ST18O60284 1047 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 CSF1RP07333 972 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 ATP5JP18859 108 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 TFCP2Q12800 502 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 LRRFIP1Q32MZ4 808 aaKnown RBP11.46□□□□□ -0.57
HMGB4-201ENST00000425537 TSHZ3Q63HK5 1081 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 JARID2Q92833 1246 aaPredicted RBP11.46□□□□□ -0.57
HMGB4-201ENST00000425537 TBC1D2Q9BYX2 928 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 TBC1D2BQ9UPU7 963 aa11.46□□□□□ -0.57
HMGB4-201ENST00000425537 MYH3P11055 1940 aa11.46□□□□□ -0.58
HMGB4-201ENST00000425537 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
HMGB4-201ENST00000425537 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
HMGB4-201ENST00000425537 GPTP24298 496 aa11.45□□□□□ -0.58
HMGB4-201ENST00000425537 MCM2P49736 904 aa11.45□□□□□ -0.58
HMGB4-201ENST00000425537 CTSWP56202 376 aa11.45□□□□□ -0.58
HMGB4-201ENST00000425537 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
HMGB4-201ENST00000425537 HLFQ16534 295 aa11.45□□□□□ -0.58
HMGB4-201ENST00000425537 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
HMGB4-201ENST00000425537 FAM89AQ96GI7 184 aa11.45□□□□□ -0.58
HMGB4-201ENST00000425537 UTP14AQ9BVJ6 771 aaKnown RBP11.45□□□□□ -0.58
HMGB4-201ENST00000425537 CCDC8Q9H0W5 538 aaPredicted RBP11.45□□□□□ -0.58
HMGB4-201ENST00000425537 ANO2Q9NQ90 1003 aa11.45□□□□□ -0.58
HMGB4-201ENST00000425537 GNPATO15228 680 aa11.44□□□□□ -0.58
HMGB4-201ENST00000425537 HSP90AA1P07900 732 aaKnown RBP11.44□□□□□ -0.58
HMGB4-201ENST00000425537 SLC15A2Q16348 729 aa11.44□□□□□ -0.58
HMGB4-201ENST00000425537 SLC27A3Q5K4L6 730 aa11.44□□□□□ -0.58
HMGB4-201ENST00000425537 KLHDC4Q8TBB5 520 aa11.44□□□□□ -0.58
HMGB4-201ENST00000425537 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
HMGB4-201ENST00000425537 TFCP2L1Q9NZI6 479 aa11.44□□□□□ -0.58
HMGB4-201ENST00000425537 MYH14Q7Z406 1995 aaKnown RBP11.44□□□□□ -0.58
HMGB4-201ENST00000425537 UBR3Q6ZT12 1888 aa11.44□□□□□ -0.58
HMGB4-201ENST00000425537 PNPLA7Q6ZV29 1317 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 SGSM2O43147 1006 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 CAMTA2O94983 1202 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 SLC4A3P48751 1232 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 CCDC158Q5M9N0 1113 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 GORABQ5T7V8 394 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 MSL1Q68DK7 614 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 ATG9AQ7Z3C6 839 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.43□□□□□ -0.58
HMGB4-201ENST00000425537 FSD1Q9BTV5 496 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 BCORQ6W2J9 1755 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 CASZ1Q86V15 1759 aa11.43□□□□□ -0.58
HMGB4-201ENST00000425537 SPEF2Q9C093 1822 aa11.42□□□□□ -0.58
HMGB4-201ENST00000425537 K7ELQ4 463 aaPredicted RBP11.42□□□□□ -0.58
HMGB4-201ENST00000425537 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
HMGB4-201ENST00000425537 ZBTB7AO95365 584 aa11.42□□□□□ -0.58
HMGB4-201ENST00000425537 CCDC152Q4G0S7 254 aa11.42□□□□□ -0.58
HMGB4-201ENST00000425537 TTLL11Q8NHH1 800 aa11.42□□□□□ -0.58
HMGB4-201ENST00000425537 NEUROD6Q96NK8 337 aa11.42□□□□□ -0.58
HMGB4-201ENST00000425537 NYXQ9GZU5 481 aa11.42□□□□□ -0.58
HMGB4-201ENST00000425537 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
HMGB4-201ENST00000425537 ZNF609O15014 1411 aa11.42□□□□□ -0.58
HMGB4-201ENST00000425537 RTL9Q8NET4 1388 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms