RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 RAD50Q92878 1312 aa10.17□□□□□ -0.78
VPS8-204ENST00000424463 CPDO75976 1380 aa10.17□□□□□ -0.78
VPS8-204ENST00000424463 HOXB7P09629 217 aa10.17□□□□□ -0.78
VPS8-204ENST00000424463 SLC52A2Q9HAB3 445 aa10.17□□□□□ -0.78
VPS8-204ENST00000424463 PEX14O75381 377 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 INHBEP58166 350 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 ICE2Q659A1 982 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 PLEKHM2Q8IWE5 1019 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 IFNL2Q8IZJ0 200 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 MICALL1Q8N3F8 863 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 LRRFIP2Q9Y608 721 aaKnown RBP10.16□□□□□ -0.78
VPS8-204ENST00000424463 KDM6AO15550 1401 aaPredicted RBP10.16□□□□□ -0.78
VPS8-204ENST00000424463 CAMTA1Q9Y6Y1 1673 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 PNMA6EA0A0J9YXQ4 647 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 ZNF790Q6PG37 636 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 TOM1L2Q6ZVM7 507 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 TBC1D32Q96NH3 1257 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 NOL10Q9BSC4 688 aaKnown RBP10.16□□□□□ -0.78
VPS8-204ENST00000424463 NUCKS1Q9H1E3 243 aaKnown RBP10.16□□□□□ -0.78
VPS8-204ENST00000424463 SUDS3Q9H7L9 328 aaPredicted RBP10.16□□□□□ -0.78
VPS8-204ENST00000424463 ARHGEF10LQ9HCE6 1279 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 STRN4Q9NRL3 753 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 SUFUQ9UMX1 484 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 PAXBP1Q9Y5B6 917 aa10.16□□□□□ -0.78
VPS8-204ENST00000424463 ZRANB2O95218 330 aaKnown RBP eCLIP10.15□□□□□ -0.78
VPS8-204ENST00000424463 GNAI3P08754 354 aa10.15□□□□□ -0.78
VPS8-204ENST00000424463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.15□□□□□ -0.781e-6■■■□□ 17.9
VPS8-204ENST00000424463 DBF4Q9UBU7 674 aaPredicted RBP10.15□□□□□ -0.78
VPS8-204ENST00000424463 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.78
VPS8-204ENST00000424463 HEG1Q9ULI3 1381 aa10.15□□□□□ -0.78
VPS8-204ENST00000424463 FAM208AQ9UK61 1670 aaKnown RBP10.15□□□□□ -0.79
VPS8-204ENST00000424463 CBX1P83916 185 aa10.15□□□□□ -0.79
VPS8-204ENST00000424463 BMP2KLQ5H9B9 411 aa10.15□□□□□ -0.79
VPS8-204ENST00000424463 ZFYVE27Q5T4F4 411 aa10.15□□□□□ -0.79
VPS8-204ENST00000424463 BEND3Q5T5X7 828 aa10.15□□□□□ -0.79
VPS8-204ENST00000424463 DNAAF4Q8WXU2 420 aa10.15□□□□□ -0.79
VPS8-204ENST00000424463 TNPO1Q92973 898 aaKnown RBP10.15□□□□□ -0.79
VPS8-204ENST00000424463 SRCIN1Q9C0H9 1055 aa10.15□□□□□ -0.79
VPS8-204ENST00000424463 UPF2Q9HAU5 1272 aaKnown RBP10.15□□□□□ -0.79
VPS8-204ENST00000424463 SMAPO00193 183 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 NBPF7P0C2Y1 421 aaPredicted RBP10.14□□□□□ -0.79
VPS8-204ENST00000424463 GSPT1P15170 499 aaKnown RBP10.14□□□□□ -0.79
VPS8-204ENST00000424463 ABCD1P33897 745 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 AIMP1Q12904 312 aaKnown RBP10.14□□□□□ -0.79
VPS8-204ENST00000424463 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
VPS8-204ENST00000424463 ZNF496Q96IT1 587 aaPredicted RBP10.14□□□□□ -0.79
VPS8-204ENST00000424463 DCAF5Q96JK2 942 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 IRF2BPLQ9H1B7 796 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 SYNRGQ9UMZ2 1314 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 KDM3BQ7LBC6 1761 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 HMMRO75330 724 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 FRAT2O75474 233 aaPredicted RBP10.14□□□□□ -0.79
VPS8-204ENST00000424463 TPM3P06753 285 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 UBTFL1P0CB47 393 aaPredicted RBP10.14□□□□□ -0.79
VPS8-204ENST00000424463 EVA1CP58658 441 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 PDIA6Q15084 440 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 CDC37Q16543 378 aaPredicted RBP10.14□□□□□ -0.79
VPS8-204ENST00000424463 CCDC82Q8N4S0 544 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 MAP3K2Q9Y2U5 619 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 WDR17Q8IZU2 1322 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 ADCY9O60503 1353 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 OVOS2A0A0G2JMS6 1433 aa10.14□□□□□ -0.79
VPS8-204ENST00000424463 FAM200BP0CF97 657 aa10.13□□□□□ -0.79
VPS8-204ENST00000424463 PIP4K2AP48426 406 aaPredicted RBP10.13□□□□□ -0.79
VPS8-204ENST00000424463 MCCD1P59942 119 aaPredicted RBP10.13□□□□□ -0.79
VPS8-204ENST00000424463 MFSD4BQ5TF39 518 aa10.13□□□□□ -0.79
VPS8-204ENST00000424463 RPAINQ86UA6 219 aa10.13□□□□□ -0.79
VPS8-204ENST00000424463 MICAL1Q8TDZ2 1067 aa10.13□□□□□ -0.79
VPS8-204ENST00000424463 C22orf23Q9BZE7 217 aa10.13□□□□□ -0.79
VPS8-204ENST00000424463 CRYBG1Q9Y4K1 1723 aa10.13□□□□□ -0.79
VPS8-204ENST00000424463 MYL6BP14649 208 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 LIG1P18858 919 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 CABP4P57796 275 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 TBC1D9Q6ZT07 1266 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 DDX54Q8TDD1 881 aaKnown RBP10.12□□□□□ -0.79
VPS8-204ENST00000424463 SNRNP27Q8WVK2 155 aaKnown RBP10.12□□□□□ -0.79
VPS8-204ENST00000424463 UBA5Q9GZZ9 404 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 ZNF232Q9UNY5 417 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 USP16Q9Y5T5 823 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 UQCRHLA0A096LP55 91 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 UQCRHP07919 91 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 SUN2Q9UH99 717 aa10.12□□□□□ -0.79
VPS8-204ENST00000424463 VIRMAQ69YN4 1812 aaKnown RBP10.12□□□□□ -0.79
VPS8-204ENST00000424463 MAP4K4O95819 1239 aaPredicted RBP10.11□□□□□ -0.79
VPS8-204ENST00000424463 ATP2B3Q16720 1220 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 CWF19L2Q2TBE0 894 aaKnown RBP10.11□□□□□ -0.79
VPS8-204ENST00000424463 TSHZ3Q63HK5 1081 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 KSR2Q6VAB6 950 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 SLX1AQ9BQ83 275 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 CALCOCO1Q9P1Z2 691 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 TTC22Q5TAA0 569 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 ZNF771Q7L3S4 317 aaPredicted RBP10.11□□□□□ -0.79
VPS8-204ENST00000424463 PPP1R42Q7Z4L9 355 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 ERCC4Q92889 916 aaPredicted RBP10.11□□□□□ -0.79
VPS8-204ENST00000424463 CXorf56Q9H5V9 222 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 DDX21Q9NR30 783 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS8-204ENST00000424463 IGSF5Q9NSI5 407 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 HYPKQ9NX55 129 aa10.11□□□□□ -0.79
VPS8-204ENST00000424463 NEFHP12036 1026 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms