RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 CT47B1P0C2W7 299 aaPredicted RBP23.77■■□□□ 1.4
PRNP-202ENST00000424424 TMC4Q7Z404 712 aa23.77■■□□□ 1.4
PRNP-202ENST00000424424 JARID2Q92833 1246 aaPredicted RBP23.77■■□□□ 1.4
PRNP-202ENST00000424424 PSMD1Q99460 953 aa23.77■■□□□ 1.4
PRNP-202ENST00000424424 ATP6V0A2Q9Y487 856 aa23.77■■□□□ 1.4
PRNP-202ENST00000424424 GCKRQ14397 625 aa23.76■■□□□ 1.39
PRNP-202ENST00000424424 ALDH1L2Q3SY69 923 aa23.76■■□□□ 1.39
PRNP-202ENST00000424424 CCDC152Q4G0S7 254 aa23.76■■□□□ 1.39
PRNP-202ENST00000424424 F6X3S4 739 aa23.75■■□□□ 1.39
PRNP-202ENST00000424424 SP8Q8IXZ3 490 aa23.75■■□□□ 1.39
PRNP-202ENST00000424424 MRPL50Q8N5N7 158 aaKnown RBP23.75■■□□□ 1.39
PRNP-202ENST00000424424 DPY19L2Q6NUT2 758 aa23.74■■□□□ 1.39
PRNP-202ENST00000424424 SSH1Q8WYL5 1049 aa23.74■■□□□ 1.39
PRNP-202ENST00000424424 H7C1W4 665 aa23.73■■□□□ 1.39
PRNP-202ENST00000424424 IARSP41252 1262 aaKnown RBP23.73■■□□□ 1.39
PRNP-202ENST00000424424 UBE3BQ7Z3V4 1068 aa23.73■■□□□ 1.39
PRNP-202ENST00000424424 ZNF277Q9NRM2 450 aaPredicted RBP23.73■■□□□ 1.39
PRNP-202ENST00000424424 PTPRCP08575 1304 aa23.73■■□□□ 1.39
PRNP-202ENST00000424424 GLTPD2A6NH11 291 aa23.72■■□□□ 1.39
PRNP-202ENST00000424424 BEND3Q5T5X7 828 aa23.72■■□□□ 1.39
PRNP-202ENST00000424424 SLC4A10Q6U841 1118 aa23.72■■□□□ 1.39
PRNP-202ENST00000424424 SNED1Q8TER0 1413 aa23.72■■□□□ 1.39
PRNP-202ENST00000424424 SUPT20HQ8NEM7 779 aa23.71■■□□□ 1.39
PRNP-202ENST00000424424 CELF1Q92879 486 aaKnown RBP23.71■■□□□ 1.39
PRNP-202ENST00000424424 SMC4Q9NTJ3 1288 aa23.71■■□□□ 1.39
PRNP-202ENST00000424424 CTSWP56202 376 aa23.7■■□□□ 1.38
PRNP-202ENST00000424424 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.38
PRNP-202ENST00000424424 DPP8Q6V1X1 898 aaPredicted RBP23.7■■□□□ 1.38
PRNP-202ENST00000424424 MPNDQ8N594 471 aa23.7■■□□□ 1.38
PRNP-202ENST00000424424 JDP2Q8WYK2 163 aa23.7■■□□□ 1.38
PRNP-202ENST00000424424 BCL2L13Q9BXK5 485 aa23.7■■□□□ 1.38
PRNP-202ENST00000424424 CEP350Q5VT06 3117 aa23.7■■□□□ 1.38
PRNP-202ENST00000424424 ALDH1L1O75891 902 aa23.69■■□□□ 1.38
PRNP-202ENST00000424424 CCDC85AQ96PX6 553 aaPredicted RBP23.69■■□□□ 1.38
PRNP-202ENST00000424424 SRCIN1Q9C0H9 1055 aa23.69■■□□□ 1.38
PRNP-202ENST00000424424 LRRC37AA6NMS7 1700 aa23.68■■□□□ 1.38
PRNP-202ENST00000424424 TTLL11Q8NHH1 800 aa23.68■■□□□ 1.38
PRNP-202ENST00000424424 VPS33BQ9H267 617 aa23.68■■□□□ 1.38
PRNP-202ENST00000424424 NMRK2Q9NPI5 230 aa23.68■■□□□ 1.38
PRNP-202ENST00000424424 SEC31BQ9NQW1 1179 aa23.68■■□□□ 1.38
PRNP-202ENST00000424424 CDC5LQ99459 802 aaKnown RBP23.67■■□□□ 1.38
PRNP-202ENST00000424424 PLA2G12BQ9BX93 195 aa23.67■■□□□ 1.38
PRNP-202ENST00000424424 C9orf78Q9NZ63 289 aaPredicted RBP23.67■■□□□ 1.38
PRNP-202ENST00000424424 KIF3CO14782 793 aa23.66■■□□□ 1.38
PRNP-202ENST00000424424 SLC51AQ86UW1 340 aa23.66■■□□□ 1.38
PRNP-202ENST00000424424 ANKRD18AQ8IVF6 992 aa23.66■■□□□ 1.38
PRNP-202ENST00000424424 C16orf71Q8IYS4 520 aaPredicted RBP23.66■■□□□ 1.38
PRNP-202ENST00000424424 LARGE2Q8N3Y3 721 aa23.66■■□□□ 1.38
PRNP-202ENST00000424424 RTFDC1Q9BY42 306 aaPredicted RBP23.66■■□□□ 1.38
PRNP-202ENST00000424424 RRAGCQ9HB90 399 aa23.66■■□□□ 1.38
PRNP-202ENST00000424424 GRM8O00222 908 aa23.65■■□□□ 1.38
PRNP-202ENST00000424424 CASP7P55210 303 aa23.65■■□□□ 1.38
PRNP-202ENST00000424424 NSFL1CQ9UNZ2 370 aaKnown RBP23.65■■□□□ 1.38
PRNP-202ENST00000424424 PPIP5K2O43314 1243 aa23.64■■□□□ 1.37
PRNP-202ENST00000424424 RTL9Q8NET4 1388 aa23.64■■□□□ 1.37
PRNP-202ENST00000424424 ZBED9Q6R2W3 1325 aa23.63■■□□□ 1.37
PRNP-202ENST00000424424 NIM1KQ8IY84 436 aa23.63■■□□□ 1.37
PRNP-202ENST00000424424 WDR90Q96KV7 1748 aa23.63■■□□□ 1.37
PRNP-202ENST00000424424 GREM2Q9H772 168 aa23.63■■□□□ 1.37
PRNP-202ENST00000424424 SPEF2Q9C093 1822 aa23.63■■□□□ 1.37
PRNP-202ENST00000424424 FZD9O00144 591 aa23.62■■□□□ 1.37
PRNP-202ENST00000424424 VEGFAP15692 232 aaPredicted RBP23.62■■□□□ 1.37
PRNP-202ENST00000424424 RARSP54136 660 aaKnown RBP23.62■■□□□ 1.37
PRNP-202ENST00000424424 BRPF1P55201 1214 aaPredicted RBP23.62■■□□□ 1.37
PRNP-202ENST00000424424 EIF6P56537 245 aaKnown RBP23.62■■□□□ 1.37
PRNP-202ENST00000424424 AOC3Q16853 763 aa23.62■■□□□ 1.37
PRNP-202ENST00000424424 COL4A1P02462 1669 aa23.62■■□□□ 1.37
PRNP-202ENST00000424424 TOMM70O94826 608 aa23.61■■□□□ 1.37
PRNP-202ENST00000424424 DDNO94850 711 aaPredicted RBP23.61■■□□□ 1.37
PRNP-202ENST00000424424 CSF1RP07333 972 aa23.61■■□□□ 1.37
PRNP-202ENST00000424424 C6orf229H3BNL8 230 aa23.6■■□□□ 1.37
PRNP-202ENST00000424424 IGHMBP2P38935 993 aaKnown RBP23.6■■□□□ 1.37
PRNP-202ENST00000424424 GPSM2P81274 684 aa23.6■■□□□ 1.37
PRNP-202ENST00000424424 ANKIB1Q9P2G1 1089 aa23.6■■□□□ 1.37
PRNP-202ENST00000424424 NOB1Q9ULX3 412 aaKnown RBP23.6■■□□□ 1.37
PRNP-202ENST00000424424 KIF16BQ96L93 1317 aa23.59■■□□□ 1.37
PRNP-202ENST00000424424 ITGA6P23229 1130 aa23.59■■□□□ 1.37
PRNP-202ENST00000424424 KIAA2012Q0VF49 1180 aa23.59■■□□□ 1.37
PRNP-202ENST00000424424 EYA3Q99504 573 aa23.59■■□□□ 1.37
PRNP-202ENST00000424424 API5Q9BZZ5 524 aaKnown RBP23.59■■□□□ 1.37
PRNP-202ENST00000424424 WASHC4Q2M389 1173 aa23.58■■□□□ 1.37
PRNP-202ENST00000424424 BSDC1Q9NW68 430 aaPredicted RBP23.58■■□□□ 1.37
PRNP-202ENST00000424424 PODXL2Q9NZ53 605 aa23.58■■□□□ 1.37
PRNP-202ENST00000424424 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.37
PRNP-202ENST00000424424 ZNF541Q9H0D2 1346 aa23.58■■□□□ 1.36
PRNP-202ENST00000424424 DUOX1Q9NRD9 1551 aa23.57■■□□□ 1.36
PRNP-202ENST00000424424 SCN4AP35499 1836 aa23.57■■□□□ 1.36
PRNP-202ENST00000424424 ANKRD18BA2A2Z9 1011 aa23.57■■□□□ 1.36
PRNP-202ENST00000424424 FOXO4P98177 505 aa23.57■■□□□ 1.36
PRNP-202ENST00000424424 FAM161AQ3B820 660 aa23.57■■□□□ 1.36
PRNP-202ENST00000424424 GPC2Q8N158 579 aa23.57■■□□□ 1.36
PRNP-202ENST00000424424 MPHOSPH8Q99549 860 aa23.57■■□□□ 1.36
PRNP-202ENST00000424424 COL4A5P29400 1685 aa23.57■■□□□ 1.36
PRNP-202ENST00000424424 LTBP1Q14766 1721 aa23.56■■□□□ 1.36
PRNP-202ENST00000424424 IQCA1LA6NCM1 817 aa23.56■■□□□ 1.36
PRNP-202ENST00000424424 CCT4P50991 539 aaKnown RBP23.56■■□□□ 1.36
PRNP-202ENST00000424424 IFIT5Q13325 482 aaKnown RBP23.56■■□□□ 1.36
PRNP-202ENST00000424424 TBC1D16Q8TBP0 767 aa23.56■■□□□ 1.36
PRNP-202ENST00000424424 POLLQ9UGP5 575 aa23.56■■□□□ 1.36
PRNP-202ENST00000424424 GGA1Q9UJY5 639 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms