RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 TM6SF1Q9BZW5 370 aa15.29■□□□□ 0.04
TOP2B-203ENST00000424225 JCADQ9P266 1359 aa15.28■□□□□ 0.04
TOP2B-203ENST00000424225 ZNF771Q7L3S4 317 aaPredicted RBP15.28■□□□□ 0.04
TOP2B-203ENST00000424225 CNTROBQ8N137 903 aa15.28■□□□□ 0.04
TOP2B-203ENST00000424225 ADAMTS13Q76LX8 1427 aa15.28■□□□□ 0.04
TOP2B-203ENST00000424225 KIF1BPQ96EK5 621 aa15.28■□□□□ 0.04
TOP2B-203ENST00000424225 STK31Q9BXU1 1019 aa15.28■□□□□ 0.04
TOP2B-203ENST00000424225 CYP46A1Q9Y6A2 500 aa15.28■□□□□ 0.04
TOP2B-203ENST00000424225 EIF2S2P20042 333 aaKnown RBP15.27■□□□□ 0.04
TOP2B-203ENST00000424225 TPD52L1Q16890 204 aaPredicted RBP15.27■□□□□ 0.04
TOP2B-203ENST00000424225 CCDC93Q567U6 631 aa15.27■□□□□ 0.04
TOP2B-203ENST00000424225 HSD3B7Q9H2F3 369 aa15.27■□□□□ 0.04
TOP2B-203ENST00000424225 PLA2G4AP47712 749 aa15.27■□□□□ 0.04
TOP2B-203ENST00000424225 ARMCX5Q6P1M9 558 aa15.27■□□□□ 0.04
TOP2B-203ENST00000424225 STOX1Q6ZVD7 989 aa15.27■□□□□ 0.04
TOP2B-203ENST00000424225 SNRKQ9NRH2 765 aa15.27■□□□□ 0.04
TOP2B-203ENST00000424225 MED23Q9ULK4 1368 aa15.27■□□□□ 0.04
TOP2B-203ENST00000424225 ERCC6LQ2NKX8 1250 aa15.27■□□□□ 0.03
TOP2B-203ENST00000424225 ENGASEQ8NFI3 743 aa15.27■□□□□ 0.03
TOP2B-203ENST00000424225 SPATA32Q96LK8 384 aa15.27■□□□□ 0.03
TOP2B-203ENST00000424225 CCDC8Q9H0W5 538 aaPredicted RBP15.27■□□□□ 0.03
TOP2B-203ENST00000424225 ERICH4A6NGS2 130 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 CCDC129Q6ZRS4 1044 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 PLEKHG3A1L390 1219 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 FOSBP53539 338 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 KRT85P78386 507 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 CCAR2Q8N163 923 aaKnown RBP15.26■□□□□ 0.03
TOP2B-203ENST00000424225 FBXW7Q969H0 707 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 ADGRL3Q9HAR2 1447 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 H2AFXP16104 143 aaPredicted RBP15.26■□□□□ 0.03
TOP2B-203ENST00000424225 RPS6KB1P23443 525 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 ABCC6O95255 1503 aa15.26■□□□□ 0.03
TOP2B-203ENST00000424225 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
TOP2B-203ENST00000424225 CCDC112Q8NEF3 446 aa15.25■□□□□ 0.03
TOP2B-203ENST00000424225 GNAT3A8MTJ3 354 aa15.25■□□□□ 0.03
TOP2B-203ENST00000424225 SKILP12757 684 aa15.25■□□□□ 0.03
TOP2B-203ENST00000424225 EIF4A1P60842 406 aaKnown RBP15.25■□□□□ 0.03
TOP2B-203ENST00000424225 DRC7Q8IY82 874 aa15.25■□□□□ 0.03
TOP2B-203ENST00000424225 GTF3C6Q969F1 213 aa15.25■□□□□ 0.03
TOP2B-203ENST00000424225 LMTK3Q96Q04 1460 aa15.25■□□□□ 0.03
TOP2B-203ENST00000424225 GABPB1Q06547 395 aaPredicted RBP15.25■□□□□ 0.03
TOP2B-203ENST00000424225 CCDC69A6NI79 296 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 TULP2O00295 520 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 SCRN1Q12765 414 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 BRF1Q92994 677 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 TRERF1Q96PN7 1200 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 SBNO1A3KN83 1393 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 GOLGA8FQ08AF8 430 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 GOLGA8DPQ0D2H9 430 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 SARM1Q6SZW1 724 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 ZBTB9Q96C00 473 aa15.24■□□□□ 0.03
TOP2B-203ENST00000424225 SH2B1Q9NRF2 756 aaPredicted RBP15.24■□□□□ 0.03
TOP2B-203ENST00000424225 KCNJ4P48050 445 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 EPHA10Q5JZY3 1008 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 FILIP1Q7Z7B0 1213 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 NKX2-3Q8TAU0 364 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 SASH3O75995 380 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 FLT4P35916 1363 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 CDC25BP30305 580 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.23■□□□□ 0.03
TOP2B-203ENST00000424225 ZCCHC17Q9NP64 241 aaKnown RBP15.23■□□□□ 0.03
TOP2B-203ENST00000424225 PAXBP1Q9Y5B6 917 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 TTC41PQ6P2S7 1318 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 NPHP3Q7Z494 1330 aa15.23■□□□□ 0.03
TOP2B-203ENST00000424225 LTKP29376 864 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 CHAF1AQ13111 956 aaPredicted RBP15.22■□□□□ 0.03
TOP2B-203ENST00000424225 SUCLG2Q96I99 432 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 BOLA2Q9H3K6 86 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 ECHDC1Q9NTX5 307 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 ATP6V1DQ9Y5K8 247 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 TAF5LO75529 589 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 CLCN6P51797 869 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 MTX1Q13505 466 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 MLECQ14165 292 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 GJB4Q9NTQ9 266 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 ZNF609O15014 1411 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
TOP2B-203ENST00000424225 HOXC9P31274 260 aa15.22■□□□□ 0.03
TOP2B-203ENST00000424225 TPM3P06753 285 aa15.21■□□□□ 0.03
TOP2B-203ENST00000424225 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
TOP2B-203ENST00000424225 ST5P78524 1137 aa15.21■□□□□ 0.03
TOP2B-203ENST00000424225 LTV1Q96GA3 475 aaPredicted RBP15.21■□□□□ 0.03
TOP2B-203ENST00000424225 USP28Q96RU2 1077 aa15.21■□□□□ 0.03
TOP2B-203ENST00000424225 SEC31AO94979 1220 aaKnown RBP15.21■□□□□ 0.03
TOP2B-203ENST00000424225 AACSQ86V21 672 aa15.21■□□□□ 0.03
TOP2B-203ENST00000424225 ZNF397Q8NF99 534 aaPredicted RBP15.21■□□□□ 0.03
TOP2B-203ENST00000424225 DNAAF4Q8WXU2 420 aa15.21■□□□□ 0.03
TOP2B-203ENST00000424225 ZSCAN31Q96LW9 406 aaPredicted RBP15.21■□□□□ 0.03
TOP2B-203ENST00000424225 L2HGDHQ9H9P8 463 aa15.21■□□□□ 0.03
TOP2B-203ENST00000424225 PXDNQ92626 1479 aa15.21■□□□□ 0.03
TOP2B-203ENST00000424225 PALLDQ8WX93 1383 aa15.21■□□□□ 0.02
TOP2B-203ENST00000424225 ZRANB2O95218 330 aaKnown RBP eCLIP15.21■□□□□ 0.027e-11■□□□□ 8.8
TOP2B-203ENST00000424225 MRFAP1L1Q96HT8 127 aa15.21■□□□□ 0.02
TOP2B-203ENST00000424225 PPP1R13BQ96KQ4 1090 aa15.2■□□□□ 0.02
TOP2B-203ENST00000424225 DPCR1Q3MIW9 517 aa15.2■□□□□ 0.02
TOP2B-203ENST00000424225 TRIM65Q6PJ69 517 aa15.2■□□□□ 0.02
TOP2B-203ENST00000424225 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
TOP2B-203ENST00000424225 GPHNQ9NQX3 736 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms