RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 ZNF428Q96B54 188 aa24.51■■□□□ 1.51
VARS2-202ENST00000421263 PHAXQ9H814 394 aaKnown RBP24.51■■□□□ 1.51
VARS2-202ENST00000421263 ZNRF3Q9ULT6 936 aa24.51■■□□□ 1.51
VARS2-202ENST00000421263 DDX60Q8IY21 1712 aaKnown RBP24.51■■□□□ 1.51
VARS2-202ENST00000421263 TAF1P21675 1872 aa24.51■■□□□ 1.51
VARS2-202ENST00000421263 TMEM88BA6NKF7 163 aa24.5■■□□□ 1.51
VARS2-202ENST00000421263 LMOD1P29536 600 aaPredicted RBP24.5■■□□□ 1.51
VARS2-202ENST00000421263 KIAA2012Q0VF49 1180 aa24.5■■□□□ 1.51
VARS2-202ENST00000421263 CCDC184Q52MB2 194 aa24.5■■□□□ 1.51
VARS2-202ENST00000421263 COL13A1Q5TAT6 717 aaPredicted RBP24.5■■□□□ 1.51
VARS2-202ENST00000421263 MAP1SQ66K74 1059 aaPredicted RBP24.5■■□□□ 1.51
VARS2-202ENST00000421263 C8orf58Q8NAV2 365 aa24.5■■□□□ 1.51
VARS2-202ENST00000421263 MKRN1Q9UHC7 482 aaKnown RBP24.5■■□□□ 1.51
VARS2-202ENST00000421263 ELL2O00472 640 aaPredicted RBP24.49■■□□□ 1.51
VARS2-202ENST00000421263 HSPA1AP0DMV8 641 aaKnown RBP24.49■■□□□ 1.51
VARS2-202ENST00000421263 HSPA1BP0DMV9 641 aaKnown RBP24.49■■□□□ 1.51
VARS2-202ENST00000421263 CXCL9Q07325 125 aa24.49■■□□□ 1.51
VARS2-202ENST00000421263 CNTNAP1P78357 1384 aa24.49■■□□□ 1.51
VARS2-202ENST00000421263 RIC3Q7Z5B4 369 aa24.48■■□□□ 1.51
VARS2-202ENST00000421263 USP50Q70EL3 339 aaPredicted RBP24.47■■□□□ 1.51
VARS2-202ENST00000421263 CELF1Q92879 486 aaKnown RBP24.47■■□□□ 1.51
VARS2-202ENST00000421263 IRS4O14654 1257 aaPredicted RBP24.46■■□□□ 1.51
VARS2-202ENST00000421263 GOLGA2Q08379 1002 aa24.46■■□□□ 1.51
VARS2-202ENST00000421263 CHMP4AQ9BY43 222 aa24.46■■□□□ 1.51
VARS2-202ENST00000421263 GPRC5DQ9NZD1 345 aa24.46■■□□□ 1.51
VARS2-202ENST00000421263 LRRC37AA6NMS7 1700 aa24.45■■□□□ 1.5
VARS2-202ENST00000421263 CCDC27Q2M243 656 aa24.45■■□□□ 1.5
VARS2-202ENST00000421263 ZBTB38Q8NAP3 1195 aaPredicted RBP24.45■■□□□ 1.5
VARS2-202ENST00000421263 TSPYL6Q8N831 410 aa24.44■■□□□ 1.5
VARS2-202ENST00000421263 DUOX1Q9NRD9 1551 aa24.44■■□□□ 1.5
VARS2-202ENST00000421263 RTL5Q5HYW3 569 aaPredicted RBP24.43■■□□□ 1.5
VARS2-202ENST00000421263 CCDC30Q5VVM6 783 aa24.43■■□□□ 1.5
VARS2-202ENST00000421263 CIAPIN1Q6FI81 312 aa24.43■■□□□ 1.5
VARS2-202ENST00000421263 CCDC191Q8NCU4 936 aa24.43■■□□□ 1.5
VARS2-202ENST00000421263 ADARB2Q9NS39 739 aaKnown RBP24.43■■□□□ 1.5
VARS2-202ENST00000421263 YDJCA8MPS7 323 aa24.42■■□□□ 1.5
VARS2-202ENST00000421263 VEGFBP49765 207 aa24.42■■□□□ 1.5
VARS2-202ENST00000421263 NCBP3Q53F19 620 aaKnown RBP24.42■■□□□ 1.5
VARS2-202ENST00000421263 MYD88Q99836 296 aa24.42■■□□□ 1.5
VARS2-202ENST00000421263 COL4A1P02462 1669 aa24.41■■□□□ 1.5
VARS2-202ENST00000421263 RASSF10A6NK89 507 aa24.41■■□□□ 1.5
VARS2-202ENST00000421263 PCCAP05165 728 aaPredicted RBP24.41■■□□□ 1.5
VARS2-202ENST00000421263 GMPSP49915 693 aaPredicted RBP24.41■■□□□ 1.5
VARS2-202ENST00000421263 RPS8P62241 208 aaKnown RBP24.41■■□□□ 1.5
VARS2-202ENST00000421263 TNIP1Q15025 636 aa24.41■■□□□ 1.5
VARS2-202ENST00000421263 WWC1Q8IX03 1113 aa24.41■■□□□ 1.5
VARS2-202ENST00000421263 METTL22Q9BUU2 404 aaPredicted RBP24.41■■□□□ 1.5
VARS2-202ENST00000421263 NSFL1CQ9UNZ2 370 aaKnown RBP24.41■■□□□ 1.5
VARS2-202ENST00000421263 CDHR2Q9BYE9 1310 aa24.4■■□□□ 1.5
VARS2-202ENST00000421263 POLLQ9UGP5 575 aa24.4■■□□□ 1.5
VARS2-202ENST00000421263 PGAP2Q9UHJ9 254 aa24.4■■□□□ 1.5
VARS2-202ENST00000421263 RAD17O75943 681 aa24.39■■□□□ 1.49
VARS2-202ENST00000421263 DDX58O95786 925 aaKnown RBP24.39■■□□□ 1.49
VARS2-202ENST00000421263 HSP90B1P14625 803 aaKnown RBP24.39■■□□□ 1.49
VARS2-202ENST00000421263 GPSM2P81274 684 aa24.39■■□□□ 1.49
VARS2-202ENST00000421263 WASHC4Q2M389 1173 aa24.39■■□□□ 1.49
VARS2-202ENST00000421263 DEFB115Q30KQ5 88 aa24.39■■□□□ 1.49
VARS2-202ENST00000421263 FMR1Q06787 632 aaKnown RBP eCLIP24.38■■□□□ 1.49
VARS2-202ENST00000421263 TSR2Q969E8 191 aaKnown RBP24.38■■□□□ 1.49
VARS2-202ENST00000421263 CWC25Q9NXE8 425 aaPredicted RBP24.38■■□□□ 1.49
VARS2-202ENST00000421263 PDE8AO60658 829 aa24.37■■□□□ 1.49
VARS2-202ENST00000421263 ZEB1P37275 1124 aaPredicted RBP24.37■■□□□ 1.49
VARS2-202ENST00000421263 SEC31BQ9NQW1 1179 aa24.37■■□□□ 1.49
VARS2-202ENST00000421263 CST9Q5W186 159 aa24.36■■□□□ 1.49
VARS2-202ENST00000421263 KSR2Q6VAB6 950 aa24.36■■□□□ 1.49
VARS2-202ENST00000421263 BCL2L13Q9BXK5 485 aa24.36■■□□□ 1.49
VARS2-202ENST00000421263 PODXL2Q9NZ53 605 aa24.36■■□□□ 1.49
VARS2-202ENST00000421263 IL16Q14005 1332 aa24.35■■□□□ 1.49
VARS2-202ENST00000421263 C6orf229H3BNL8 230 aa24.35■■□□□ 1.49
VARS2-202ENST00000421263 HIRAP54198 1017 aaPredicted RBP24.35■■□□□ 1.49
VARS2-202ENST00000421263 TBC1D16Q8TBP0 767 aa24.35■■□□□ 1.49
VARS2-202ENST00000421263 ZC3H15Q8WU90 426 aaKnown RBP24.35■■□□□ 1.49
VARS2-202ENST00000421263 DPF2Q92785 391 aa24.35■■□□□ 1.49
VARS2-202ENST00000421263 CNOT7Q9UIV1 285 aaKnown RBP24.35■■□□□ 1.49
VARS2-202ENST00000421263 MAP3K2Q9Y2U5 619 aa24.35■■□□□ 1.49
VARS2-202ENST00000421263 PI4KAP2A4QPH2 592 aa24.34■■□□□ 1.49
VARS2-202ENST00000421263 RIMBP2O15034 1052 aa24.34■■□□□ 1.49
VARS2-202ENST00000421263 IGKV5-2P06315 115 aa24.34■■□□□ 1.49
VARS2-202ENST00000421263 CCDC152Q4G0S7 254 aa24.34■■□□□ 1.49
VARS2-202ENST00000421263 PI4KAP1Q8N8J0 262 aa24.34■■□□□ 1.49
VARS2-202ENST00000421263 EYA3Q99504 573 aa24.34■■□□□ 1.49
VARS2-202ENST00000421263 TRAF5O00463 557 aa24.33■■□□□ 1.49
VARS2-202ENST00000421263 TWISTNBQ3B726 338 aaPredicted RBP24.33■■□□□ 1.49
VARS2-202ENST00000421263 TNS4Q8IZW8 715 aa24.33■■□□□ 1.49
VARS2-202ENST00000421263 JARID2Q92833 1246 aaPredicted RBP24.33■■□□□ 1.49
VARS2-202ENST00000421263 DBNDD1Q9H9R9 158 aa24.33■■□□□ 1.49
VARS2-202ENST00000421263 WBP1LQ9NX94 342 aa24.33■■□□□ 1.49
VARS2-202ENST00000421263 WDR33Q9C0J8 1336 aaKnown RBP24.33■■□□□ 1.48
VARS2-202ENST00000421263 PSMD14O00487 310 aa24.32■■□□□ 1.48
VARS2-202ENST00000421263 FOXN1O15353 648 aa24.32■■□□□ 1.48
VARS2-202ENST00000421263 STK31Q9BXU1 1019 aa24.32■■□□□ 1.48
VARS2-202ENST00000421263 ABT1Q9ULW3 272 aaKnown RBP24.32■■□□□ 1.48
VARS2-202ENST00000421263 TRPM7Q96QT4 1865 aa24.32■■□□□ 1.48
VARS2-202ENST00000421263 SHTN1A0MZ66 631 aa24.31■■□□□ 1.48
VARS2-202ENST00000421263 H7C1D1 291 aa24.31■■□□□ 1.48
VARS2-202ENST00000421263 ZBTB12Q9Y330 459 aaPredicted RBP24.31■■□□□ 1.48
VARS2-202ENST00000421263 ZNF316A6NFI3 1004 aaPredicted RBP24.3■■□□□ 1.48
VARS2-202ENST00000421263 ECE2O60344 883 aa24.3■■□□□ 1.48
VARS2-202ENST00000421263 G2E3Q7L622 706 aa24.3■■□□□ 1.48
VARS2-202ENST00000421263 TRPM4Q8TD43 1214 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms