RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 NOB1Q9ULX3 412 aaKnown RBP21.03■□□□□ 0.96
SEC22C-206ENST00000420163 PPEF1O14829 653 aaPredicted RBP21.02■□□□□ 0.96
SEC22C-206ENST00000420163 BCAR3O75815 825 aa21.02■□□□□ 0.96
SEC22C-206ENST00000420163 CCDC93Q567U6 631 aa21.02■□□□□ 0.96
SEC22C-206ENST00000420163 C9orf131Q5VYM1 1079 aa21.02■□□□□ 0.96
SEC22C-206ENST00000420163 CCDC85AQ96PX6 553 aaPredicted RBP21.02■□□□□ 0.96
SEC22C-206ENST00000420163 SRCIN1Q9C0H9 1055 aa21.02■□□□□ 0.96
SEC22C-206ENST00000420163 GRAPQ13588 217 aa21.01■□□□□ 0.95
SEC22C-206ENST00000420163 GRAPLQ8TC17 118 aaPredicted RBP21.01■□□□□ 0.95
SEC22C-206ENST00000420163 CELF1Q92879 486 aaKnown RBP21.01■□□□□ 0.95
SEC22C-206ENST00000420163 ALDH1L1O75891 902 aa21■□□□□ 0.95
SEC22C-206ENST00000420163 CTSWP56202 376 aa21■□□□□ 0.95
SEC22C-206ENST00000420163 SOGA3Q5TF21 947 aa21■□□□□ 0.95
SEC22C-206ENST00000420163 SEC31BQ9NQW1 1179 aa21■□□□□ 0.95
SEC22C-206ENST00000420163 RNF181Q9P0P0 153 aa21■□□□□ 0.95
SEC22C-206ENST00000420163 LTBP3Q9NS15 1303 aa21■□□□□ 0.95
SEC22C-206ENST00000420163 HSP90B1P14625 803 aaKnown RBP20.99■□□□□ 0.95
SEC22C-206ENST00000420163 TAOK3Q9H2K8 898 aa20.99■□□□□ 0.95
SEC22C-206ENST00000420163 LTBP1Q14766 1721 aa20.98■□□□□ 0.95
SEC22C-206ENST00000420163 GRM8O00222 908 aa20.98■□□□□ 0.95
SEC22C-206ENST00000420163 TTLL11Q8NHH1 800 aa20.98■□□□□ 0.95
SEC22C-206ENST00000420163 PLA2G12BQ9BX93 195 aa20.98■□□□□ 0.95
SEC22C-206ENST00000420163 TNNQ9UQP3 1299 aa20.98■□□□□ 0.95
SEC22C-206ENST00000420163 ATP6V0A2Q9Y487 856 aa20.98■□□□□ 0.95
SEC22C-206ENST00000420163 KIF16BQ96L93 1317 aa20.98■□□□□ 0.95
SEC22C-206ENST00000420163 DUOX1Q9NRD9 1551 aa20.97■□□□□ 0.95
SEC22C-206ENST00000420163 BBOX1O75936 387 aa20.97■□□□□ 0.95
SEC22C-206ENST00000420163 LMNB1P20700 586 aa20.97■□□□□ 0.95
SEC22C-206ENST00000420163 CCDC152Q4G0S7 254 aa20.97■□□□□ 0.95
SEC22C-206ENST00000420163 FKBP4Q02790 459 aaKnown RBP eCLIP20.96■□□□□ 0.95
SEC22C-206ENST00000420163 EPHA10Q5JZY3 1008 aa20.96■□□□□ 0.95
SEC22C-206ENST00000420163 RTKN2Q8IZC4 609 aa20.96■□□□□ 0.95
SEC22C-206ENST00000420163 ZNF784Q8NCA9 323 aaPredicted RBP20.96■□□□□ 0.95
SEC22C-206ENST00000420163 API5Q9BZZ5 524 aaKnown RBP20.96■□□□□ 0.95
SEC22C-206ENST00000420163 GREM2Q9H772 168 aa20.96■□□□□ 0.95
SEC22C-206ENST00000420163 C9orf78Q9NZ63 289 aaPredicted RBP20.96■□□□□ 0.95
SEC22C-206ENST00000420163 COL4A5P29400 1685 aa20.96■□□□□ 0.95
SEC22C-206ENST00000420163 NBPF7P0C2Y1 421 aaPredicted RBP20.95■□□□□ 0.94
SEC22C-206ENST00000420163 FOXO4P98177 505 aa20.95■□□□□ 0.94
SEC22C-206ENST00000420163 CC2D2BQ6DHV5 1058 aa20.95■□□□□ 0.94
SEC22C-206ENST00000420163 SP8Q8IXZ3 490 aa20.95■□□□□ 0.94
SEC22C-206ENST00000420163 ZNF277Q9NRM2 450 aaPredicted RBP20.95■□□□□ 0.94
SEC22C-206ENST00000420163 RTL9Q8NET4 1388 aa20.95■□□□□ 0.94
SEC22C-206ENST00000420163 FAM161AQ3B820 660 aa20.94■□□□□ 0.94
SEC22C-206ENST00000420163 FRAT1Q92837 279 aaPredicted RBP20.94■□□□□ 0.94
SEC22C-206ENST00000420163 KAZALD1Q96I82 304 aa20.94■□□□□ 0.94
SEC22C-206ENST00000420163 UTYO14607 1347 aa20.94■□□□□ 0.94
SEC22C-206ENST00000420163 A0A1B0GUL6 1792 aa20.93■□□□□ 0.94
SEC22C-206ENST00000420163 CSF1RP07333 972 aa20.93■□□□□ 0.94
SEC22C-206ENST00000420163 RPS8P62241 208 aaKnown RBP20.93■□□□□ 0.94
SEC22C-206ENST00000420163 ARHGAP45Q92619 1136 aa20.93■□□□□ 0.94
SEC22C-206ENST00000420163 SUCLG2Q96I99 432 aa20.93■□□□□ 0.94
SEC22C-206ENST00000420163 YTHDC1Q96MU7 727 aaKnown RBP20.93■□□□□ 0.94
SEC22C-206ENST00000420163 PSMD1Q99460 953 aa20.93■□□□□ 0.94
SEC22C-206ENST00000420163 TRIM27P14373 513 aa20.92■□□□□ 0.94
SEC22C-206ENST00000420163 ZNF526Q8TF50 670 aaPredicted RBP20.92■□□□□ 0.94
SEC22C-206ENST00000420163 USP44Q9H0E7 712 aa20.92■□□□□ 0.94
SEC22C-206ENST00000420163 CCT4P50991 539 aaKnown RBP20.91■□□□□ 0.94
SEC22C-206ENST00000420163 TMC4Q7Z404 712 aa20.91■□□□□ 0.94
SEC22C-206ENST00000420163 IARSP41252 1262 aaKnown RBP20.9■□□□□ 0.94
SEC22C-206ENST00000420163 LMBR1LQ6UX01 489 aa20.9■□□□□ 0.94
SEC22C-206ENST00000420163 ATF7IPQ6VMQ6 1270 aa20.9■□□□□ 0.94
SEC22C-206ENST00000420163 ANKRD18AQ8IVF6 992 aa20.9■□□□□ 0.94
SEC22C-206ENST00000420163 IPO8O15397 1037 aaKnown RBP20.89■□□□□ 0.93
SEC22C-206ENST00000420163 ITGA6P23229 1130 aa20.89■□□□□ 0.93
SEC22C-206ENST00000420163 GPSM2P81274 684 aa20.89■□□□□ 0.93
SEC22C-206ENST00000420163 GRIPAP1Q4V328 841 aa20.89■□□□□ 0.93
SEC22C-206ENST00000420163 DPP8Q6V1X1 898 aaPredicted RBP20.89■□□□□ 0.93
SEC22C-206ENST00000420163 MPNDQ8N594 471 aa20.89■□□□□ 0.93
SEC22C-206ENST00000420163 CLUAP1Q96AJ1 413 aa20.89■□□□□ 0.93
SEC22C-206ENST00000420163 ZKSCAN2Q63HK3 967 aa20.88■□□□□ 0.93
SEC22C-206ENST00000420163 CDC5LQ99459 802 aaKnown RBP20.88■□□□□ 0.93
SEC22C-206ENST00000420163 RTFDC1Q9BY42 306 aaPredicted RBP20.88■□□□□ 0.93
SEC22C-206ENST00000420163 TMX4Q9H1E5 349 aaPredicted RBP20.88■□□□□ 0.93
SEC22C-206ENST00000420163 CHMP3Q9Y3E7 222 aa20.88■□□□□ 0.93
SEC22C-206ENST00000420163 ZC3H4Q9UPT8 1303 aaKnown RBP20.87■□□□□ 0.93
SEC22C-206ENST00000420163 INTS3Q68E01 1043 aaKnown RBP20.87■□□□□ 0.93
SEC22C-206ENST00000420163 ANKRD44Q8N8A2 993 aa20.87■□□□□ 0.93
SEC22C-206ENST00000420163 BICC1Q9H694 974 aaKnown RBP20.87■□□□□ 0.93
SEC22C-206ENST00000420163 NSFL1CQ9UNZ2 370 aaKnown RBP20.86■□□□□ 0.93
SEC22C-206ENST00000420163 AOC3Q16853 763 aa20.85■□□□□ 0.93
SEC22C-206ENST00000420163 RABL6Q3YEC7 729 aaPredicted RBP20.85■□□□□ 0.93
SEC22C-206ENST00000420163 GPR101Q96P66 508 aaPredicted RBP20.85■□□□□ 0.93
SEC22C-206ENST00000420163 MEIS3Q99687 375 aa20.85■□□□□ 0.93
SEC22C-206ENST00000420163 ZNF541Q9H0D2 1346 aa20.84■□□□□ 0.93
SEC22C-206ENST00000420163 ANKRD18BA2A2Z9 1011 aa20.84■□□□□ 0.93
SEC22C-206ENST00000420163 PPIP5K2O43314 1243 aa20.84■□□□□ 0.93
SEC22C-206ENST00000420163 IFIT5Q13325 482 aaKnown RBP20.84■□□□□ 0.93
SEC22C-206ENST00000420163 ZNF594Q96JF6 807 aaPredicted RBP20.84■□□□□ 0.93
SEC22C-206ENST00000420163 BSDC1Q9NW68 430 aaPredicted RBP20.84■□□□□ 0.93
SEC22C-206ENST00000420163 POLLQ9UGP5 575 aa20.84■□□□□ 0.93
SEC22C-206ENST00000420163 MINPP1Q9UNW1 487 aa20.84■□□□□ 0.93
SEC22C-206ENST00000420163 RLBP1P12271 317 aa20.83■□□□□ 0.93
SEC22C-206ENST00000420163 IGHMBP2P38935 993 aaKnown RBP20.83■□□□□ 0.93
SEC22C-206ENST00000420163 LARGE2Q8N3Y3 721 aa20.83■□□□□ 0.93
SEC22C-206ENST00000420163 TMEM57Q8N5G2 664 aa20.83■□□□□ 0.93
SEC22C-206ENST00000420163 SUPT20HQ8NEM7 779 aa20.83■□□□□ 0.93
SEC22C-206ENST00000420163 TBC1D16Q8TBP0 767 aa20.83■□□□□ 0.93
SEC22C-206ENST00000420163 GPBP1L1Q9HC44 474 aaPredicted RBP20.83■□□□□ 0.93
SEC22C-206ENST00000420163 NMRK2Q9NPI5 230 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms