RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 MEIS3Q99687 375 aa19■□□□□ 0.63
CDRT15-201ENST00000420162 PIM2Q9P1W9 311 aa19■□□□□ 0.63
CDRT15-201ENST00000420162 COG6Q9Y2V7 657 aa19■□□□□ 0.63
CDRT15-201ENST00000420162 LAMB2P55268 1798 aa19■□□□□ 0.63
CDRT15-201ENST00000420162 ZBTB7BO15156 539 aaPredicted RBP18.99■□□□□ 0.63
CDRT15-201ENST00000420162 CSF1RP07333 972 aa18.99■□□□□ 0.63
CDRT15-201ENST00000420162 FOXO4P98177 505 aa18.99■□□□□ 0.63
CDRT15-201ENST00000420162 TTLL11Q8NHH1 800 aa18.99■□□□□ 0.63
CDRT15-201ENST00000420162 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
CDRT15-201ENST00000420162 SUCLG2Q96I99 432 aa18.99■□□□□ 0.63
CDRT15-201ENST00000420162 CRAMP1Q96RY5 1269 aa18.99■□□□□ 0.63
CDRT15-201ENST00000420162 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
CDRT15-201ENST00000420162 MYH3P11055 1940 aa18.98■□□□□ 0.63
CDRT15-201ENST00000420162 DDX46Q7L014 1031 aaKnown RBP18.98■□□□□ 0.63
CDRT15-201ENST00000420162 KAZALD1Q96I82 304 aa18.98■□□□□ 0.63
CDRT15-201ENST00000420162 GNAI2P04899 355 aa18.97■□□□□ 0.63
CDRT15-201ENST00000420162 TTLL6Q8N841 843 aa18.97■□□□□ 0.63
CDRT15-201ENST00000420162 KIAA1551Q9HCM1 1747 aa18.97■□□□□ 0.63
CDRT15-201ENST00000420162 RTL9Q8NET4 1388 aa18.96■□□□□ 0.63
CDRT15-201ENST00000420162 RABL6Q3YEC7 729 aaPredicted RBP18.96■□□□□ 0.63
CDRT15-201ENST00000420162 DALRD3Q5D0E6 543 aaKnown RBP18.96■□□□□ 0.63
CDRT15-201ENST00000420162 EPHA10Q5JZY3 1008 aa18.96■□□□□ 0.63
CDRT15-201ENST00000420162 LMBR1LQ6UX01 489 aa18.96■□□□□ 0.63
CDRT15-201ENST00000420162 BICC1Q9H694 974 aaKnown RBP18.96■□□□□ 0.63
CDRT15-201ENST00000420162 DLEC1Q9Y238 1755 aa18.96■□□□□ 0.63
CDRT15-201ENST00000420162 BBOX1O75936 387 aa18.95■□□□□ 0.62
CDRT15-201ENST00000420162 LRRFIP2Q9Y608 721 aaKnown RBP18.95■□□□□ 0.62
CDRT15-201ENST00000420162 COL11A2P13942 1736 aaPredicted RBP18.94■□□□□ 0.62
CDRT15-201ENST00000420162 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
CDRT15-201ENST00000420162 GRAPQ13588 217 aa18.94■□□□□ 0.62
CDRT15-201ENST00000420162 ANKRD44Q8N8A2 993 aa18.94■□□□□ 0.62
CDRT15-201ENST00000420162 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
CDRT15-201ENST00000420162 CCDC85AQ96PX6 553 aaPredicted RBP18.94■□□□□ 0.62
CDRT15-201ENST00000420162 CDC5LQ99459 802 aaKnown RBP18.94■□□□□ 0.62
CDRT15-201ENST00000420162 GREM2Q9H772 168 aa18.94■□□□□ 0.62
CDRT15-201ENST00000420162 ANKRD18BA2A2Z9 1011 aa18.93■□□□□ 0.62
CDRT15-201ENST00000420162 RPS8P62241 208 aaKnown RBP18.93■□□□□ 0.62
CDRT15-201ENST00000420162 CCDC57Q2TAC2 916 aa18.93■□□□□ 0.62
CDRT15-201ENST00000420162 TMC4Q7Z404 712 aa18.93■□□□□ 0.62
CDRT15-201ENST00000420162 ZBTB40Q9NUA8 1239 aa18.93■□□□□ 0.62
CDRT15-201ENST00000420162 CHMP3Q9Y3E7 222 aa18.93■□□□□ 0.62
CDRT15-201ENST00000420162 ITGA6P23229 1130 aa18.92■□□□□ 0.62
CDRT15-201ENST00000420162 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
CDRT15-201ENST00000420162 PRPF40BQ6NWY9 871 aaKnown RBP18.92■□□□□ 0.62
CDRT15-201ENST00000420162 SEC31BQ9NQW1 1179 aa18.92■□□□□ 0.62
CDRT15-201ENST00000420162 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
CDRT15-201ENST00000420162 BRCA1P38398 1863 aaKnown RBP18.92■□□□□ 0.62
CDRT15-201ENST00000420162 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
CDRT15-201ENST00000420162 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
CDRT15-201ENST00000420162 MTX1Q13505 466 aa18.9■□□□□ 0.62
CDRT15-201ENST00000420162 AAMPQ13685 434 aa18.9■□□□□ 0.62
CDRT15-201ENST00000420162 SOGA3Q5TF21 947 aa18.9■□□□□ 0.62
CDRT15-201ENST00000420162 CC2D2BQ6DHV5 1058 aa18.9■□□□□ 0.62
CDRT15-201ENST00000420162 CELF1Q92879 486 aaKnown RBP18.9■□□□□ 0.62
CDRT15-201ENST00000420162 SLX4Q8IY92 1834 aa18.89■□□□□ 0.61
CDRT15-201ENST00000420162 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
CDRT15-201ENST00000420162 PPEF1O14829 653 aaPredicted RBP18.89■□□□□ 0.61
CDRT15-201ENST00000420162 IGHMBP2P38935 993 aaKnown RBP18.89■□□□□ 0.61
CDRT15-201ENST00000420162 GPR162Q16538 588 aa18.89■□□□□ 0.61
CDRT15-201ENST00000420162 C7orf43Q8WVR3 580 aa18.89■□□□□ 0.61
CDRT15-201ENST00000420162 CRBNQ96SW2 442 aa18.89■□□□□ 0.61
CDRT15-201ENST00000420162 ATP8B2P98198 1209 aa18.88■□□□□ 0.61
CDRT15-201ENST00000420162 GRIPAP1Q4V328 841 aa18.88■□□□□ 0.61
CDRT15-201ENST00000420162 TAF7LQ5H9L4 462 aa18.88■□□□□ 0.61
CDRT15-201ENST00000420162 SP8Q8IXZ3 490 aa18.88■□□□□ 0.61
CDRT15-201ENST00000420162 MPHOSPH8Q99549 860 aa18.88■□□□□ 0.61
CDRT15-201ENST00000420162 C1orf115Q9H7X2 142 aa18.88■□□□□ 0.61
CDRT15-201ENST00000420162 BSDC1Q9NW68 430 aaPredicted RBP18.88■□□□□ 0.61
CDRT15-201ENST00000420162 WWC3Q9ULE0 1092 aa18.88■□□□□ 0.61
CDRT15-201ENST00000420162 ATP6V0A2Q9Y487 856 aa18.88■□□□□ 0.61
CDRT15-201ENST00000420162 TAF1P21675 1872 aa18.88■□□□□ 0.61
CDRT15-201ENST00000420162 SRGAP3O43295 1099 aa18.87■□□□□ 0.61
CDRT15-201ENST00000420162 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
CDRT15-201ENST00000420162 C21orf2O43822 256 aa18.86■□□□□ 0.61
CDRT15-201ENST00000420162 GRIN3BO60391 1043 aa18.86■□□□□ 0.61
CDRT15-201ENST00000420162 RPAP2Q8IXW5 612 aaPredicted RBP18.86■□□□□ 0.61
CDRT15-201ENST00000420162 ARFGEF1Q9Y6D6 1849 aa18.86■□□□□ 0.61
CDRT15-201ENST00000420162 YBX3P16989 372 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDRT15-201ENST00000420162 CEP85Q6P2H3 762 aa18.85■□□□□ 0.61
CDRT15-201ENST00000420162 LDHAL6AQ6ZMR3 332 aa18.85■□□□□ 0.61
CDRT15-201ENST00000420162 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
CDRT15-201ENST00000420162 ZNF219Q9P2Y4 722 aaPredicted RBP18.85■□□□□ 0.61
CDRT15-201ENST00000420162 CACNA1SQ13698 1873 aa18.85■□□□□ 0.61
CDRT15-201ENST00000420162 RFX5P48382 616 aaPredicted RBP18.84■□□□□ 0.61
CDRT15-201ENST00000420162 CCDC93Q567U6 631 aa18.84■□□□□ 0.61
CDRT15-201ENST00000420162 SSH3Q8TE77 659 aa18.84■□□□□ 0.61
CDRT15-201ENST00000420162 ZNF594Q96JF6 807 aaPredicted RBP18.84■□□□□ 0.61
CDRT15-201ENST00000420162 FBXO3Q9UK99 471 aa18.84■□□□□ 0.61
CDRT15-201ENST00000420162 PNMA6EA0A0J9YXQ4 647 aa18.83■□□□□ 0.6
CDRT15-201ENST00000420162 HMMRO75330 724 aa18.83■□□□□ 0.6
CDRT15-201ENST00000420162 PTPN12Q05209 780 aaKnown RBP18.83■□□□□ 0.6
CDRT15-201ENST00000420162 POLA2Q14181 598 aa18.83■□□□□ 0.6
CDRT15-201ENST00000420162 COPRSQ9NQ92 184 aa18.83■□□□□ 0.6
CDRT15-201ENST00000420162 CNNM1Q9NRU3 951 aa18.83■□□□□ 0.6
CDRT15-201ENST00000420162 EXOC6Q8TAG9 804 aa18.82■□□□□ 0.6
CDRT15-201ENST00000420162 ANKRD2Q9GZV1 360 aa18.82■□□□□ 0.6
CDRT15-201ENST00000420162 MINPP1Q9UNW1 487 aa18.82■□□□□ 0.6
CDRT15-201ENST00000420162 EYA2O00167 538 aa18.81■□□□□ 0.6
CDRT15-201ENST00000420162 OLFM4Q6UX06 510 aa18.81■□□□□ 0.6
CDRT15-201ENST00000420162 ARHGAP27Q6ZUM4 889 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms