RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 CDHR2Q9BYE9 1310 aa26.36■■□□□ 1.81
MCF2L-212ENST00000420013 CNTNAP1P78357 1384 aa26.35■■□□□ 1.81
MCF2L-212ENST00000420013 HSP90B1P14625 803 aaKnown RBP26.35■■□□□ 1.81
MCF2L-212ENST00000420013 SCNN1DP51172 638 aa26.35■■□□□ 1.81
MCF2L-212ENST00000420013 SF3B3Q15393 1217 aaKnown RBP26.35■■□□□ 1.81
MCF2L-212ENST00000420013 CLEC11AQ9Y240 323 aa26.35■■□□□ 1.81
MCF2L-212ENST00000420013 TRPM7Q96QT4 1865 aa26.34■■□□□ 1.81
MCF2L-212ENST00000420013 ITGBL1O95965 494 aaPredicted RBP26.34■■□□□ 1.81
MCF2L-212ENST00000420013 KIAA2012Q0VF49 1180 aa26.34■■□□□ 1.81
MCF2L-212ENST00000420013 CCDC27Q2M243 656 aa26.34■■□□□ 1.81
MCF2L-212ENST00000420013 ATP5J2-PTCD1G3V325 749 aa26.33■■□□□ 1.81
MCF2L-212ENST00000420013 RIC3Q7Z5B4 369 aa26.33■■□□□ 1.81
MCF2L-212ENST00000420013 FAM89AQ96GI7 184 aa26.33■■□□□ 1.81
MCF2L-212ENST00000420013 ZNRF3Q9ULT6 936 aa26.33■■□□□ 1.81
MCF2L-212ENST00000420013 MYH3P11055 1940 aa26.32■■□□□ 1.8
MCF2L-212ENST00000420013 TMEM88BA6NKF7 163 aa26.32■■□□□ 1.8
MCF2L-212ENST00000420013 CCDC30Q5VVM6 783 aa26.32■■□□□ 1.8
MCF2L-212ENST00000420013 CACNA1FO60840 1977 aa26.31■■□□□ 1.8
MCF2L-212ENST00000420013 NCBP3Q53F19 620 aaKnown RBP26.31■■□□□ 1.8
MCF2L-212ENST00000420013 USP50Q70EL3 339 aaPredicted RBP26.31■■□□□ 1.8
MCF2L-212ENST00000420013 IRS4O14654 1257 aaPredicted RBP26.3■■□□□ 1.8
MCF2L-212ENST00000420013 DDX58O95786 925 aaKnown RBP26.3■■□□□ 1.8
MCF2L-212ENST00000420013 HSPA1AP0DMV8 641 aaKnown RBP26.3■■□□□ 1.8
MCF2L-212ENST00000420013 HSPA1BP0DMV9 641 aaKnown RBP26.3■■□□□ 1.8
MCF2L-212ENST00000420013 ZBTB38Q8NAP3 1195 aaPredicted RBP26.3■■□□□ 1.8
MCF2L-212ENST00000420013 CNTROBQ8N137 903 aa26.29■■□□□ 1.8
MCF2L-212ENST00000420013 CCDC191Q8NCU4 936 aa26.29■■□□□ 1.8
MCF2L-212ENST00000420013 PHAXQ9H814 394 aaKnown RBP26.29■■□□□ 1.8
MCF2L-212ENST00000420013 MKRN1Q9UHC7 482 aaKnown RBP26.29■■□□□ 1.8
MCF2L-212ENST00000420013 COL4A1P02462 1669 aa26.28■■□□□ 1.8
MCF2L-212ENST00000420013 ELL2O00472 640 aaPredicted RBP26.28■■□□□ 1.8
MCF2L-212ENST00000420013 MAP1SQ66K74 1059 aaPredicted RBP26.28■■□□□ 1.8
MCF2L-212ENST00000420013 C8orf58Q8NAV2 365 aa26.28■■□□□ 1.8
MCF2L-212ENST00000420013 ADARB2Q9NS39 739 aaKnown RBP26.28■■□□□ 1.8
MCF2L-212ENST00000420013 GPRC5DQ9NZD1 345 aa26.28■■□□□ 1.8
MCF2L-212ENST00000420013 EPS15P42566 896 aa26.27■■□□□ 1.8
MCF2L-212ENST00000420013 CXCL9Q07325 125 aa26.27■■□□□ 1.8
MCF2L-212ENST00000420013 CIAPIN1Q6FI81 312 aa26.27■■□□□ 1.8
MCF2L-212ENST00000420013 IL16Q14005 1332 aa26.27■■□□□ 1.8
MCF2L-212ENST00000420013 THSD7BQ9C0I4 1608 aa26.27■■□□□ 1.8
MCF2L-212ENST00000420013 TNIP1Q15025 636 aa26.26■■□□□ 1.79
MCF2L-212ENST00000420013 CELF1Q92879 486 aaKnown RBP26.26■■□□□ 1.79
MCF2L-212ENST00000420013 PCCAP05165 728 aaPredicted RBP26.25■■□□□ 1.79
MCF2L-212ENST00000420013 MYD88Q99836 296 aa26.25■■□□□ 1.79
MCF2L-212ENST00000420013 CWC25Q9NXE8 425 aaPredicted RBP26.25■■□□□ 1.79
MCF2L-212ENST00000420013 CCDC184Q52MB2 194 aa26.24■■□□□ 1.79
MCF2L-212ENST00000420013 METTL22Q9BUU2 404 aaPredicted RBP26.24■■□□□ 1.79
MCF2L-212ENST00000420013 STK31Q9BXU1 1019 aa26.24■■□□□ 1.79
MCF2L-212ENST00000420013 PSME4Q14997 1843 aa26.23■■□□□ 1.79
MCF2L-212ENST00000420013 RTL5Q5HYW3 569 aaPredicted RBP26.23■■□□□ 1.79
MCF2L-212ENST00000420013 WWC1Q8IX03 1113 aa26.23■■□□□ 1.79
MCF2L-212ENST00000420013 ZNF428Q96B54 188 aa26.23■■□□□ 1.79
MCF2L-212ENST00000420013 RASSF10A6NK89 507 aa26.22■■□□□ 1.79
MCF2L-212ENST00000420013 GMPSP49915 693 aaPredicted RBP26.22■■□□□ 1.79
MCF2L-212ENST00000420013 CCDC152Q4G0S7 254 aa26.22■■□□□ 1.79
MCF2L-212ENST00000420013 EYA3Q99504 573 aa26.22■■□□□ 1.79
MCF2L-212ENST00000420013 PDE8AO60658 829 aa26.21■■□□□ 1.79
MCF2L-212ENST00000420013 RPS8P62241 208 aaKnown RBP26.21■■□□□ 1.79
MCF2L-212ENST00000420013 WASHC4Q2M389 1173 aa26.21■■□□□ 1.79
MCF2L-212ENST00000420013 TSPYL6Q8N831 410 aa26.21■■□□□ 1.79
MCF2L-212ENST00000420013 TSR2Q969E8 191 aaKnown RBP26.21■■□□□ 1.79
MCF2L-212ENST00000420013 MRS2Q9HD23 443 aa26.21■■□□□ 1.79
MCF2L-212ENST00000420013 NSFL1CQ9UNZ2 370 aaKnown RBP26.21■■□□□ 1.79
MCF2L-212ENST00000420013 ANP32CO43423 234 aa26.2■■□□□ 1.78
MCF2L-212ENST00000420013 COL13A1Q5TAT6 717 aaPredicted RBP26.2■■□□□ 1.78
MCF2L-212ENST00000420013 BCL2L13Q9BXK5 485 aa26.2■■□□□ 1.78
MCF2L-212ENST00000420013 SPEF2Q9C093 1822 aa26.19■■□□□ 1.78
MCF2L-212ENST00000420013 YDJCA8MPS7 323 aa26.19■■□□□ 1.78
MCF2L-212ENST00000420013 RAD17O75943 681 aa26.19■■□□□ 1.78
MCF2L-212ENST00000420013 TWISTNBQ3B726 338 aaPredicted RBP26.19■■□□□ 1.78
MCF2L-212ENST00000420013 KSR2Q6VAB6 950 aa26.19■■□□□ 1.78
MCF2L-212ENST00000420013 PODXL2Q9NZ53 605 aa26.19■■□□□ 1.78
MCF2L-212ENST00000420013 NEXNQ0ZGT2 675 aa26.18■■□□□ 1.78
MCF2L-212ENST00000420013 MAP3K2Q9Y2U5 619 aa26.18■■□□□ 1.78
MCF2L-212ENST00000420013 ZNF316A6NFI3 1004 aaPredicted RBP26.17■■□□□ 1.78
MCF2L-212ENST00000420013 C6orf229H3BNL8 230 aa26.17■■□□□ 1.78
MCF2L-212ENST00000420013 VEGFBP49765 207 aa26.17■■□□□ 1.78
MCF2L-212ENST00000420013 GPSM2P81274 684 aa26.17■■□□□ 1.78
MCF2L-212ENST00000420013 ZC3H15Q8WU90 426 aaKnown RBP26.17■■□□□ 1.78
MCF2L-212ENST00000420013 SCN9AQ15858 1988 aa26.16■■□□□ 1.78
MCF2L-212ENST00000420013 ZNF609O15014 1411 aa26.16■■□□□ 1.78
MCF2L-212ENST00000420013 DEFB115Q30KQ5 88 aa26.16■■□□□ 1.78
MCF2L-212ENST00000420013 POLLQ9UGP5 575 aa26.16■■□□□ 1.78
MCF2L-212ENST00000420013 ABT1Q9ULW3 272 aaKnown RBP26.16■■□□□ 1.78
MCF2L-212ENST00000420013 PI4KAP2A4QPH2 592 aa26.15■■□□□ 1.78
MCF2L-212ENST00000420013 RPS12P25398 132 aaKnown RBP26.15■■□□□ 1.78
MCF2L-212ENST00000420013 PI4KAP1Q8N8J0 262 aa26.15■■□□□ 1.78
MCF2L-212ENST00000420013 TBC1D16Q8TBP0 767 aa26.15■■□□□ 1.78
MCF2L-212ENST00000420013 DPF2Q92785 391 aa26.15■■□□□ 1.78
MCF2L-212ENST00000420013 PGAP2Q9UHJ9 254 aa26.15■■□□□ 1.78
MCF2L-212ENST00000420013 RTL9Q8NET4 1388 aa26.15■■□□□ 1.78
MCF2L-212ENST00000420013 ECE2O60344 883 aa26.14■■□□□ 1.78
MCF2L-212ENST00000420013 DBNDD1Q9H9R9 158 aa26.14■■□□□ 1.78
MCF2L-212ENST00000420013 SEC31BQ9NQW1 1179 aa26.14■■□□□ 1.78
MCF2L-212ENST00000420013 FANCIQ9NVI1 1328 aa26.14■■□□□ 1.77
MCF2L-212ENST00000420013 H7C1D1 291 aa26.13■■□□□ 1.77
MCF2L-212ENST00000420013 IGKV5-2P06315 115 aa26.13■■□□□ 1.77
MCF2L-212ENST00000420013 CTSWP56202 376 aa26.13■■□□□ 1.77
MCF2L-212ENST00000420013 TNS4Q8IZW8 715 aa26.13■■□□□ 1.77
MCF2L-212ENST00000420013 AIDAQ96BJ3 306 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms