RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 HYPKQ9NX55 129 aa22.46■■□□□ 1.19
PTCD1-202ENST00000419981 MPNDQ8N594 471 aa22.45■■□□□ 1.18
PTCD1-202ENST00000419981 ZNF428Q96B54 188 aa22.45■■□□□ 1.18
PTCD1-202ENST00000419981 SPEF2Q9C093 1822 aa22.45■■□□□ 1.18
PTCD1-202ENST00000419981 CACNA1FO60840 1977 aa22.45■■□□□ 1.18
PTCD1-202ENST00000419981 APAF1O14727 1248 aa22.44■■□□□ 1.18
PTCD1-202ENST00000419981 POLR2AP24928 1970 aaKnown RBP22.44■■□□□ 1.18
PTCD1-202ENST00000419981 EPS15P42566 896 aa22.44■■□□□ 1.18
PTCD1-202ENST00000419981 ISCA1Q9BUE6 129 aa22.44■■□□□ 1.18
PTCD1-202ENST00000419981 ATP5J2-PTCD1G3V325 749 aa22.43■■□□□ 1.18
PTCD1-202ENST00000419981 ZNF853P0CG23 659 aa22.43■■□□□ 1.18
PTCD1-202ENST00000419981 CALD1Q05682 793 aaKnown RBP22.43■■□□□ 1.18
PTCD1-202ENST00000419981 TMC4Q7Z404 712 aa22.43■■□□□ 1.18
PTCD1-202ENST00000419981 IFT57Q9NWB7 429 aa22.43■■□□□ 1.18
PTCD1-202ENST00000419981 ZNRF3Q9ULT6 936 aa22.43■■□□□ 1.18
PTCD1-202ENST00000419981 COL4A1P02462 1669 aa22.42■■□□□ 1.18
PTCD1-202ENST00000419981 GNAI1P63096 354 aa22.42■■□□□ 1.18
PTCD1-202ENST00000419981 USP50Q70EL3 339 aaPredicted RBP22.42■■□□□ 1.18
PTCD1-202ENST00000419981 TNS4Q8IZW8 715 aa22.42■■□□□ 1.18
PTCD1-202ENST00000419981 FAM89AQ96GI7 184 aa22.42■■□□□ 1.18
PTCD1-202ENST00000419981 PSME4Q14997 1843 aa22.41■■□□□ 1.18
PTCD1-202ENST00000419981 KIAA2012Q0VF49 1180 aa22.41■■□□□ 1.18
PTCD1-202ENST00000419981 THSD7BQ9C0I4 1608 aa22.4■■□□□ 1.18
PTCD1-202ENST00000419981 CXCL9Q07325 125 aa22.4■■□□□ 1.18
PTCD1-202ENST00000419981 GPRC5DQ9NZD1 345 aa22.4■■□□□ 1.18
PTCD1-202ENST00000419981 VEGFBP49765 207 aa22.39■■□□□ 1.17
PTCD1-202ENST00000419981 GOLGA2Q08379 1002 aa22.39■■□□□ 1.17
PTCD1-202ENST00000419981 RIC3Q7Z5B4 369 aa22.39■■□□□ 1.17
PTCD1-202ENST00000419981 ADARB2Q9NS39 739 aaKnown RBP22.39■■□□□ 1.17
PTCD1-202ENST00000419981 SCN9AQ15858 1988 aa22.38■■□□□ 1.17
PTCD1-202ENST00000419981 TRIM28Q13263 835 aaKnown RBP22.38■■□□□ 1.17
PTCD1-202ENST00000419981 SF3B3Q15393 1217 aaKnown RBP22.38■■□□□ 1.17
PTCD1-202ENST00000419981 RTL5Q5HYW3 569 aaPredicted RBP22.38■■□□□ 1.17
PTCD1-202ENST00000419981 CIAPIN1Q6FI81 312 aa22.38■■□□□ 1.17
PTCD1-202ENST00000419981 CDHR2Q9BYE9 1310 aa22.37■■□□□ 1.17
PTCD1-202ENST00000419981 RASSF10A6NK89 507 aa22.37■■□□□ 1.17
PTCD1-202ENST00000419981 ELL2O00472 640 aaPredicted RBP22.37■■□□□ 1.17
PTCD1-202ENST00000419981 DEFB115Q30KQ5 88 aa22.37■■□□□ 1.17
PTCD1-202ENST00000419981 PHAXQ9H814 394 aaKnown RBP22.37■■□□□ 1.17
PTCD1-202ENST00000419981 ABT1Q9ULW3 272 aaKnown RBP22.37■■□□□ 1.17
PTCD1-202ENST00000419981 IRS4O14654 1257 aaPredicted RBP22.36■■□□□ 1.17
PTCD1-202ENST00000419981 GMPSP49915 693 aaPredicted RBP22.36■■□□□ 1.17
PTCD1-202ENST00000419981 TNIP1Q15025 636 aa22.36■■□□□ 1.17
PTCD1-202ENST00000419981 CELF1Q92879 486 aaKnown RBP22.36■■□□□ 1.17
PTCD1-202ENST00000419981 RAD17O75943 681 aa22.35■■□□□ 1.17
PTCD1-202ENST00000419981 BCL2L13Q9BXK5 485 aa22.35■■□□□ 1.17
PTCD1-202ENST00000419981 FOXN1O15353 648 aa22.34■■□□□ 1.17
PTCD1-202ENST00000419981 ZBTB38Q8NAP3 1195 aaPredicted RBP22.34■■□□□ 1.17
PTCD1-202ENST00000419981 AIDAQ96BJ3 306 aa22.34■■□□□ 1.17
PTCD1-202ENST00000419981 NSFL1CQ9UNZ2 370 aaKnown RBP22.34■■□□□ 1.17
PTCD1-202ENST00000419981 YDJCA8MPS7 323 aa22.33■■□□□ 1.17
PTCD1-202ENST00000419981 FMR1Q06787 632 aaKnown RBP eCLIP22.33■■□□□ 1.17
PTCD1-202ENST00000419981 WASHC4Q2M389 1173 aa22.33■■□□□ 1.17
PTCD1-202ENST00000419981 C8orf58Q8NAV2 365 aa22.33■■□□□ 1.17
PTCD1-202ENST00000419981 MYD88Q99836 296 aa22.33■■□□□ 1.17
PTCD1-202ENST00000419981 CHMP4AQ9BY43 222 aa22.33■■□□□ 1.17
PTCD1-202ENST00000419981 CAPN15O75808 1086 aa22.32■■□□□ 1.16
PTCD1-202ENST00000419981 HSP90B1P14625 803 aaKnown RBP22.32■■□□□ 1.16
PTCD1-202ENST00000419981 CCDC30Q5VVM6 783 aa22.32■■□□□ 1.16
PTCD1-202ENST00000419981 WDR33Q9C0J8 1336 aaKnown RBP22.31■■□□□ 1.16
PTCD1-202ENST00000419981 C6orf229H3BNL8 230 aa22.31■■□□□ 1.16
PTCD1-202ENST00000419981 TRAF5O00463 557 aa22.31■■□□□ 1.16
PTCD1-202ENST00000419981 CCDC191Q8NCU4 936 aa22.31■■□□□ 1.16
PTCD1-202ENST00000419981 DDX58O95786 925 aaKnown RBP22.3■■□□□ 1.16
PTCD1-202ENST00000419981 RPS8P62241 208 aaKnown RBP22.3■■□□□ 1.16
PTCD1-202ENST00000419981 GPSM2P81274 684 aa22.3■■□□□ 1.16
PTCD1-202ENST00000419981 EYA3Q99504 573 aa22.3■■□□□ 1.16
PTCD1-202ENST00000419981 RIMBP2O15034 1052 aa22.29■■□□□ 1.16
PTCD1-202ENST00000419981 PCCAP05165 728 aaPredicted RBP22.29■■□□□ 1.16
PTCD1-202ENST00000419981 CTCFP49711 727 aaPredicted RBP22.29■■□□□ 1.16
PTCD1-202ENST00000419981 DBNDD1Q9H9R9 158 aa22.29■■□□□ 1.16
PTCD1-202ENST00000419981 WBP1LQ9NX94 342 aa22.29■■□□□ 1.16
PTCD1-202ENST00000419981 CWC25Q9NXE8 425 aaPredicted RBP22.29■■□□□ 1.16
PTCD1-202ENST00000419981 POLLQ9UGP5 575 aa22.29■■□□□ 1.16
PTCD1-202ENST00000419981 CNOT7Q9UIV1 285 aaKnown RBP22.29■■□□□ 1.16
PTCD1-202ENST00000419981 CST9Q5W186 159 aa22.28■■□□□ 1.16
PTCD1-202ENST00000419981 PAXIP1Q6ZW49 1069 aaPredicted RBP22.28■■□□□ 1.16
PTCD1-202ENST00000419981 TSPYL6Q8N831 410 aa22.28■■□□□ 1.16
PTCD1-202ENST00000419981 METTL22Q9BUU2 404 aaPredicted RBP22.28■■□□□ 1.16
PTCD1-202ENST00000419981 PRDM10Q9NQV6 1147 aa22.28■■□□□ 1.16
PTCD1-202ENST00000419981 H7C1D1 291 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 PSMD14O00487 310 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 PDE8AO60658 829 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 ECE1P42892 770 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 CCDC152Q4G0S7 254 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 CCDC184Q52MB2 194 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 MICALL2Q8IY33 904 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 TRPM4Q8TD43 1214 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 ZC3H15Q8WU90 426 aaKnown RBP22.27■■□□□ 1.16
PTCD1-202ENST00000419981 TSR2Q969E8 191 aaKnown RBP22.27■■□□□ 1.16
PTCD1-202ENST00000419981 SEC31BQ9NQW1 1179 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 PGAP2Q9UHJ9 254 aa22.27■■□□□ 1.16
PTCD1-202ENST00000419981 ECE2O60344 883 aa22.26■■□□□ 1.15
PTCD1-202ENST00000419981 HIRAP54198 1017 aaPredicted RBP22.26■■□□□ 1.15
PTCD1-202ENST00000419981 MAP2K1Q02750 393 aaPredicted RBP22.26■■□□□ 1.15
PTCD1-202ENST00000419981 TBC1D16Q8TBP0 767 aa22.26■■□□□ 1.15
PTCD1-202ENST00000419981 CAPNS2Q96L46 248 aa22.26■■□□□ 1.15
PTCD1-202ENST00000419981 GLIS2Q9BZE0 524 aaPredicted RBP22.26■■□□□ 1.15
PTCD1-202ENST00000419981 ZBTB12Q9Y330 459 aaPredicted RBP22.26■■□□□ 1.15
PTCD1-202ENST00000419981 TLL2Q9Y6L7 1015 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms