RNA–Protein interactions for RNA: ENST00000419093.5

LSS-203, Transcript of lanosterol synthase, humanhuman

TSL 3

Gene LSS, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-203ENST00000419093 NLRP3Q96P20 1036 aa12.34□□□□□ -0.43
LSS-203ENST00000419093 RWDD1Q9H446 243 aaPredicted RBP12.34□□□□□ -0.43
LSS-203ENST00000419093 PPP4R2Q9NY27 417 aa12.34□□□□□ -0.43
LSS-203ENST00000419093 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
LSS-203ENST00000419093 BCORQ6W2J9 1755 aa12.33□□□□□ -0.44
LSS-203ENST00000419093 SCN7AQ01118 1682 aa12.33□□□□□ -0.44
LSS-203ENST00000419093 RTL5Q5HYW3 569 aaPredicted RBP12.33□□□□□ -0.44
LSS-203ENST00000419093 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.44
LSS-203ENST00000419093 PDZRN3Q9UPQ7 1066 aa12.33□□□□□ -0.44
LSS-203ENST00000419093 BRCA1P38398 1863 aaKnown RBP12.32□□□□□ -0.44
LSS-203ENST00000419093 C4AP0C0L4 1744 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 ATP8B2P98198 1209 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 DDR1Q08345 913 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 MTX1Q13505 466 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 ERFEQ4G0M1 354 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 CCDC152Q4G0S7 254 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 C16orf71Q8IYS4 520 aaPredicted RBP12.32□□□□□ -0.44
LSS-203ENST00000419093 ANKRD44Q8N8A2 993 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 SUCLG2Q96I99 432 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 BICC1Q9H694 974 aaKnown RBP12.32□□□□□ -0.44
LSS-203ENST00000419093 ARFGEF1Q9Y6D6 1849 aa12.32□□□□□ -0.44
LSS-203ENST00000419093 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
LSS-203ENST00000419093 CSF1RP07333 972 aa12.31□□□□□ -0.44
LSS-203ENST00000419093 HCLS1P14317 486 aaPredicted RBP12.31□□□□□ -0.44
LSS-203ENST00000419093 PDE6BP35913 854 aa12.31□□□□□ -0.44
LSS-203ENST00000419093 CTSWP56202 376 aa12.31□□□□□ -0.44
LSS-203ENST00000419093 CCDC57Q2TAC2 916 aa12.31□□□□□ -0.44
LSS-203ENST00000419093 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
LSS-203ENST00000419093 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
LSS-203ENST00000419093 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
LSS-203ENST00000419093 LMBR1LQ6UX01 489 aa12.31□□□□□ -0.44
LSS-203ENST00000419093 JARID2Q92833 1246 aaPredicted RBP12.31□□□□□ -0.44
LSS-203ENST00000419093 CCDC136Q96JN2 1154 aa12.31□□□□□ -0.44
LSS-203ENST00000419093 ANKRD36CQ5JPF3 1778 aa12.3□□□□□ -0.44
LSS-203ENST00000419093 N4BP2Q86UW6 1770 aaPredicted RBP12.3□□□□□ -0.44
LSS-203ENST00000419093 FOXO4P98177 505 aa12.3□□□□□ -0.44
LSS-203ENST00000419093 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
LSS-203ENST00000419093 HDAC1Q13547 482 aaPredicted RBP12.3□□□□□ -0.44
LSS-203ENST00000419093 SF3B3Q15393 1217 aaKnown RBP12.3□□□□□ -0.44
LSS-203ENST00000419093 HSP90AB4PQ58FF6 505 aa12.3□□□□□ -0.44
LSS-203ENST00000419093 C1orf115Q9H7X2 142 aa12.3□□□□□ -0.44
LSS-203ENST00000419093 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
LSS-203ENST00000419093 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
LSS-203ENST00000419093 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
LSS-203ENST00000419093 PCDHB15Q9Y5E8 787 aa12.3□□□□□ -0.44
LSS-203ENST00000419093 GTF3C3Q9Y5Q9 886 aa12.3□□□□□ -0.44
LSS-203ENST00000419093 TNRC6CQ9HCJ0 1690 aaKnown RBP12.29□□□□□ -0.44
LSS-203ENST00000419093 SYNE4Q8N205 404 aa12.29□□□□□ -0.44
LSS-203ENST00000419093 TTLL11Q8NHH1 800 aa12.29□□□□□ -0.44
LSS-203ENST00000419093 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
LSS-203ENST00000419093 KAZALD1Q96I82 304 aa12.29□□□□□ -0.44
LSS-203ENST00000419093 AFDNP55196 1824 aaKnown RBP12.29□□□□□ -0.44
LSS-203ENST00000419093 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
LSS-203ENST00000419093 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
LSS-203ENST00000419093 ANKRD18BA2A2Z9 1011 aa12.28□□□□□ -0.44
LSS-203ENST00000419093 HTRA3P83110 453 aa12.28□□□□□ -0.44
LSS-203ENST00000419093 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
LSS-203ENST00000419093 RPGRQ92834 1020 aaKnown RBP12.28□□□□□ -0.44
LSS-203ENST00000419093 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
LSS-203ENST00000419093 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
LSS-203ENST00000419093 RTL9Q8NET4 1388 aa12.28□□□□□ -0.44
LSS-203ENST00000419093 KLRG2A4D1S0 409 aaPredicted RBP12.27□□□□□ -0.45
LSS-203ENST00000419093 POLA2Q14181 598 aa12.27□□□□□ -0.45
LSS-203ENST00000419093 EPHA10Q5JZY3 1008 aa12.27□□□□□ -0.45
LSS-203ENST00000419093 ARHGAP27Q6ZUM4 889 aa12.27□□□□□ -0.45
LSS-203ENST00000419093 DDX46Q7L014 1031 aaKnown RBP12.27□□□□□ -0.45
LSS-203ENST00000419093 SMC1BQ8NDV3 1235 aa12.27□□□□□ -0.45
LSS-203ENST00000419093 GCC1Q96CN9 775 aa12.27□□□□□ -0.45
LSS-203ENST00000419093 RBM17Q96I25 401 aaKnown RBP12.27□□□□□ -0.45
LSS-203ENST00000419093 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
LSS-203ENST00000419093 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
LSS-203ENST00000419093 SBF1O95248 1867 aa12.27□□□□□ -0.45
LSS-203ENST00000419093 PNMA6EA0A0J9YXQ4 647 aa12.26□□□□□ -0.45
LSS-203ENST00000419093 H0YIN7 160 aa12.26□□□□□ -0.45
LSS-203ENST00000419093 ITGA6P23229 1130 aa12.26□□□□□ -0.45
LSS-203ENST00000419093 ALDH1B1P30837 517 aa12.26□□□□□ -0.45
LSS-203ENST00000419093 G3BP1Q13283 466 aaKnown RBP eCLIP12.26□□□□□ -0.45
LSS-203ENST00000419093 CRY2Q49AN0 593 aa12.26□□□□□ -0.45
LSS-203ENST00000419093 CENPQQ7L2Z9 268 aaPredicted RBP12.26□□□□□ -0.45
LSS-203ENST00000419093 ERC1Q8IUD2 1116 aa12.26□□□□□ -0.45
LSS-203ENST00000419093 COPRSQ9NQ92 184 aa12.26□□□□□ -0.45
LSS-203ENST00000419093 RAB11FIP3O75154 756 aa12.25□□□□□ -0.45
LSS-203ENST00000419093 SURF6O75683 361 aaKnown RBP12.25□□□□□ -0.45
LSS-203ENST00000419093 HSPA1AP0DMV8 641 aaKnown RBP12.25□□□□□ -0.45
LSS-203ENST00000419093 HSPA1BP0DMV9 641 aaKnown RBP12.25□□□□□ -0.45
LSS-203ENST00000419093 NPR1P16066 1061 aa12.25□□□□□ -0.45
LSS-203ENST00000419093 HOXA10P31260 410 aaPredicted RBP12.25□□□□□ -0.45
LSS-203ENST00000419093 IGHMBP2P38935 993 aaKnown RBP12.25□□□□□ -0.45
LSS-203ENST00000419093 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
LSS-203ENST00000419093 TMC4Q7Z404 712 aa12.25□□□□□ -0.45
LSS-203ENST00000419093 ANKRD18AQ8IVF6 992 aa12.25□□□□□ -0.45
LSS-203ENST00000419093 SIRT2Q8IXJ6 389 aa12.25□□□□□ -0.45
LSS-203ENST00000419093 MPHOSPH8Q99549 860 aa12.25□□□□□ -0.45
LSS-203ENST00000419093 TMX4Q9H1E5 349 aaPredicted RBP12.25□□□□□ -0.45
LSS-203ENST00000419093 GREM2Q9H772 168 aa12.25□□□□□ -0.45
LSS-203ENST00000419093 DCTPP1Q9H773 170 aa12.25□□□□□ -0.45
LSS-203ENST00000419093 NOP58Q9Y2X3 529 aaKnown RBP12.25□□□□□ -0.45
LSS-203ENST00000419093 ZC3H4Q9UPT8 1303 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms