RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MAP3K10Q02779 954 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 GLYCTKQ8IVS8 523 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 CCER1Q8TC90 406 aaPredicted RBP8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 BTBD6Q96KE9 485 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 PNMA5Q96PV4 448 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 NAGPAQ9UK23 515 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 STARD13Q9Y3M8 1113 aa8.47□□□□□ -1.05
HMGB1P49-201ENST00000418882 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 MMP20O60882 483 aa8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 MAP3K6O95382 1288 aa8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 RARAP10276 462 aa8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 TBC1D8BQ0IIM8 1120 aa8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 ELOA3BQ3SY89 546 aa8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 ELOA3Q8NG57 546 aa8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 C11orf16Q9NQ32 467 aa8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 DNAJB12Q9NXW2 375 aaKnown RBP8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P49-201ENST00000418882 PDIA4P13667 645 aaKnown RBP8.45□□□□□ -1.06
HMGB1P49-201ENST00000418882 MZF1P28698 734 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P49-201ENST00000418882 MLLT1Q03111 559 aaPredicted RBP8.45□□□□□ -1.06
HMGB1P49-201ENST00000418882 KCNA1Q09470 495 aa8.45□□□□□ -1.06
HMGB1P49-201ENST00000418882 CHSY3Q70JA7 882 aa8.45□□□□□ -1.06
HMGB1P49-201ENST00000418882 DHX32Q7L7V1 743 aaKnown RBP8.45□□□□□ -1.06
HMGB1P49-201ENST00000418882 UBE2OQ9C0C9 1292 aaKnown RBP8.45□□□□□ -1.06
HMGB1P49-201ENST00000418882 FAM13BQ9NYF5 915 aa8.45□□□□□ -1.06
HMGB1P49-201ENST00000418882 TMEM63CQ9P1W3 806 aa8.45□□□□□ -1.06
HMGB1P49-201ENST00000418882 NEUROD1Q13562 356 aa8.44□□□□□ -1.06
HMGB1P49-201ENST00000418882 ALKBH2Q6NS38 261 aa8.44□□□□□ -1.06
HMGB1P49-201ENST00000418882 NLRP13Q86W25 1043 aa8.44□□□□□ -1.06
HMGB1P49-201ENST00000418882 NEDD1Q8NHV4 660 aa8.44□□□□□ -1.06
HMGB1P49-201ENST00000418882 SLC6A14Q9UN76 642 aa8.44□□□□□ -1.06
HMGB1P49-201ENST00000418882 ALBP02768 609 aa8.43□□□□□ -1.06
HMGB1P49-201ENST00000418882 CYP2E1P05181 493 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P49-201ENST00000418882 AAMPQ13685 434 aa8.43□□□□□ -1.06
HMGB1P49-201ENST00000418882 COL13A1Q5TAT6 717 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P49-201ENST00000418882 C8orf86Q6ZUL3 223 aa8.43□□□□□ -1.06
HMGB1P49-201ENST00000418882 EFCC1Q9HA90 598 aa8.43□□□□□ -1.06
HMGB1P49-201ENST00000418882 TLR7Q9NYK1 1049 aaKnown RBP8.43□□□□□ -1.06
HMGB1P49-201ENST00000418882 CNTNAP5Q8WYK1 1306 aa8.43□□□□□ -1.06
HMGB1P49-201ENST00000418882 DGKGP49619 791 aa8.42□□□□□ -1.06
HMGB1P49-201ENST00000418882 C8orf34Q49A92 452 aa8.42□□□□□ -1.06
HMGB1P49-201ENST00000418882 AEBP1Q8IUX7 1158 aa8.42□□□□□ -1.06
HMGB1P49-201ENST00000418882 GJD3Q8N144 294 aa8.42□□□□□ -1.06
HMGB1P49-201ENST00000418882 CNTN3Q9P232 1028 aa8.42□□□□□ -1.06
HMGB1P49-201ENST00000418882 AMPD1P23109 780 aa8.41□□□□□ -1.06
HMGB1P49-201ENST00000418882 PLAURQ03405 335 aa8.41□□□□□ -1.06
HMGB1P49-201ENST00000418882 LINC00114Q6XXX2 140 aa8.41□□□□□ -1.06
HMGB1P49-201ENST00000418882 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
HMGB1P49-201ENST00000418882 HFE2Q6ZVN8 426 aa8.41□□□□□ -1.06
HMGB1P49-201ENST00000418882 TRPM4Q8TD43 1214 aa8.41□□□□□ -1.06
HMGB1P49-201ENST00000418882 NSUN5Q96P11 429 aaKnown RBP8.41□□□□□ -1.06
HMGB1P49-201ENST00000418882 ELP3Q9H9T3 547 aa8.41□□□□□ -1.06
HMGB1P49-201ENST00000418882 ENAMQ9NRM1 1142 aa8.41□□□□□ -1.06
HMGB1P49-201ENST00000418882 IGHA2P01877 340 aa8.4□□□□□ -1.06
HMGB1P49-201ENST00000418882 GSK3AP49840 483 aa8.4□□□□□ -1.06
HMGB1P49-201ENST00000418882 GPLD1P80108 840 aa8.4□□□□□ -1.06
HMGB1P49-201ENST00000418882 COL9A3Q14050 684 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P49-201ENST00000418882 PDE12Q6L8Q7 609 aaKnown RBP8.4□□□□□ -1.06
HMGB1P49-201ENST00000418882 ZNF438Q7Z4V0 828 aa8.4□□□□□ -1.06
HMGB1P49-201ENST00000418882 OR13H1Q8NG92 308 aa8.4□□□□□ -1.06
HMGB1P49-201ENST00000418882 CHRDQ9H2X0 955 aa8.4□□□□□ -1.06
HMGB1P49-201ENST00000418882 ABI2Q9NYB9 513 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P49-201ENST00000418882 J3QW42 95 aa8.39□□□□□ -1.07
HMGB1P49-201ENST00000418882 HOXD8P13378 290 aaPredicted RBP8.39□□□□□ -1.07
HMGB1P49-201ENST00000418882 CPB1P15086 417 aa8.39□□□□□ -1.07
HMGB1P49-201ENST00000418882 NRLP54845 237 aa8.39□□□□□ -1.07
HMGB1P49-201ENST00000418882 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
HMGB1P49-201ENST00000418882 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
HMGB1P49-201ENST00000418882 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
HMGB1P49-201ENST00000418882 FOXD3Q9UJU5 478 aaPredicted RBP8.39□□□□□ -1.07
HMGB1P49-201ENST00000418882 FNDC3AQ9Y2H6 1198 aaKnown RBP8.39□□□□□ -1.07
HMGB1P49-201ENST00000418882 FAM181BA6NEQ2 426 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 M0R082 166 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 SOX18P35713 384 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 PERM1Q5SV97 790 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 FAM35AQ86V20 835 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 MICALL1Q8N3F8 863 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 ZNF417Q8TAU3 575 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 NUDT8Q8WV74 236 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 ZNF587Q96SQ5 575 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 LPIN3Q9BQK8 851 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 KANSL3Q9P2N6 904 aa8.38□□□□□ -1.07
HMGB1P49-201ENST00000418882 PSAPP07602 524 aa8.37□□□□□ -1.07
HMGB1P49-201ENST00000418882 ALAS2P22557 587 aa8.37□□□□□ -1.07
HMGB1P49-201ENST00000418882 MARSP56192 900 aaKnown RBP8.37□□□□□ -1.07
HMGB1P49-201ENST00000418882 PSAPL1Q6NUJ1 521 aa8.37□□□□□ -1.07
HMGB1P49-201ENST00000418882 TRIM11Q96F44 468 aa8.37□□□□□ -1.07
HMGB1P49-201ENST00000418882 FAM129BQ96TA1 746 aa8.37□□□□□ -1.07
HMGB1P49-201ENST00000418882 SUV39H2Q9H5I1 410 aa8.37□□□□□ -1.07
HMGB1P49-201ENST00000418882 BIN2Q9UBW5 565 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P49-201ENST00000418882 BRPF3Q9ULD4 1205 aa8.37□□□□□ -1.07
HMGB1P49-201ENST00000418882 GPR182O15218 404 aa8.36□□□□□ -1.07
HMGB1P49-201ENST00000418882 TNFRSF21O75509 655 aa8.36□□□□□ -1.07
HMGB1P49-201ENST00000418882 ACPPP15309 386 aa8.36□□□□□ -1.07
HMGB1P49-201ENST00000418882 PCSK2P16519 638 aa8.36□□□□□ -1.07
HMGB1P49-201ENST00000418882 ADAMTSL4Q6UY14 1074 aa8.36□□□□□ -1.07
HMGB1P49-201ENST00000418882 LOC102724428A0A0B4J2F2 783 aa8.35□□□□□ -1.07
HMGB1P49-201ENST00000418882 RPLP1P05386 114 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms