RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 GRIPAP1Q4V328 841 aa8.69□□□□□ -1.02
NCL-203ENST00000417652 BEND3Q5T5X7 828 aa8.69□□□□□ -1.02
NCL-203ENST00000417652 C9orf131Q5VYM1 1079 aa8.69□□□□□ -1.02
NCL-203ENST00000417652 CC2D2BQ6DHV5 1058 aa8.69□□□□□ -1.02
NCL-203ENST00000417652 TAOK3Q9H2K8 898 aa8.69□□□□□ -1.02
NCL-203ENST00000417652 KIF16BQ96L93 1317 aa8.69□□□□□ -1.02
NCL-203ENST00000417652 CACNA1SQ13698 1873 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 H7C1W4 665 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 GRM8O00222 908 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 CCT4P50991 539 aaKnown RBP8.68□□□□□ -1.02
NCL-203ENST00000417652 RPS8P62241 208 aaKnown RBP8.68□□□□□ -1.02
NCL-203ENST00000417652 RASSF7Q02833 373 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 GRAPQ13588 217 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 SF3B3Q15393 1217 aaKnown RBP8.68□□□□□ -1.02
NCL-203ENST00000417652 TAF7LQ5H9L4 462 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 TMC4Q7Z404 712 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 ANKRD18AQ8IVF6 992 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 GRAPLQ8TC17 118 aaPredicted RBP8.68□□□□□ -1.02
NCL-203ENST00000417652 ZNF526Q8TF50 670 aaPredicted RBP8.68□□□□□ -1.02
NCL-203ENST00000417652 CDC5LQ99459 802 aaKnown RBP8.68□□□□□ -1.02
NCL-203ENST00000417652 HDAC5Q9UQL6 1122 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 ABCC4O15439 1325 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 CDHR2Q9BYE9 1310 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 GOLGB1Q14789 3259 aaKnown RBP8.68□□□□□ -1.02
NCL-203ENST00000417652 SLX4Q8IY92 1834 aa8.68□□□□□ -1.02
NCL-203ENST00000417652 G3V3G9 751 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 BCAR3O75815 825 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 IGHMBP2P38935 993 aaKnown RBP8.67□□□□□ -1.02
NCL-203ENST00000417652 CTSWP56202 376 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 RIC1Q4ADV7 1423 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 DCAF8Q5TAQ9 597 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 OLFM4Q6UX06 510 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 DPP8Q6V1X1 898 aaPredicted RBP8.67□□□□□ -1.02
NCL-203ENST00000417652 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 MPNDQ8N594 471 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 ANKIB1Q9P2G1 1089 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 ATP6V0A2Q9Y487 856 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 ARFGEF1Q9Y6D6 1849 aa8.67□□□□□ -1.02
NCL-203ENST00000417652 BRCA1P38398 1863 aaKnown RBP8.66□□□□□ -1.02
NCL-203ENST00000417652 KIAA1551Q9HCM1 1747 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 ANKRD18BA2A2Z9 1011 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 C6orf229H3BNL8 230 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 FKBP4Q02790 459 aaKnown RBP eCLIP8.66□□□□□ -1.02
NCL-203ENST00000417652 IFIT5Q13325 482 aaKnown RBP8.66□□□□□ -1.02
NCL-203ENST00000417652 CCDC57Q2TAC2 916 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 ZKSCAN2Q63HK3 967 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 DPY19L2Q6NUT2 758 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 FTSJ3Q8IY81 847 aaKnown RBP8.66□□□□□ -1.02
NCL-203ENST00000417652 SUPT20HQ8NEM7 779 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 TTLL11Q8NHH1 800 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 C7orf43Q8WVR3 580 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 JDP2Q8WYK2 163 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 ARHGAP45Q92619 1136 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 CLUAP1Q96AJ1 413 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 MPHOSPH8Q99549 860 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 GPBP1L1Q9HC44 474 aaPredicted RBP8.66□□□□□ -1.02
NCL-203ENST00000417652 SEC31BQ9NQW1 1179 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 ZNF277Q9NRM2 450 aaPredicted RBP8.66□□□□□ -1.02
NCL-203ENST00000417652 NSFL1CQ9UNZ2 370 aaKnown RBP8.66□□□□□ -1.02
NCL-203ENST00000417652 DLEC1Q9Y238 1755 aa8.66□□□□□ -1.02
NCL-203ENST00000417652 COL11A2P13942 1736 aaPredicted RBP8.66□□□□□ -1.02
NCL-203ENST00000417652 NFKBIEO00221 500 aa8.65□□□□□ -1.02
NCL-203ENST00000417652 UBTFL1P0CB47 393 aaPredicted RBP8.65□□□□□ -1.02
NCL-203ENST00000417652 BRPF1P55201 1214 aaPredicted RBP8.65□□□□□ -1.02
NCL-203ENST00000417652 LMBR1LQ6UX01 489 aa8.65□□□□□ -1.02
NCL-203ENST00000417652 ATF7IPQ6VMQ6 1270 aa8.65□□□□□ -1.02
NCL-203ENST00000417652 LARGE2Q8N3Y3 721 aa8.65□□□□□ -1.02
NCL-203ENST00000417652 CELF1Q92879 486 aaKnown RBP8.65□□□□□ -1.02
NCL-203ENST00000417652 GREM2Q9H772 168 aa8.65□□□□□ -1.02
NCL-203ENST00000417652 KDM2BQ8NHM5 1336 aa8.64□□□□□ -1.03
NCL-203ENST00000417652 PPIP5K2O43314 1243 aa8.64□□□□□ -1.03
NCL-203ENST00000417652 MS4A1P11836 297 aa8.64□□□□□ -1.03
NCL-203ENST00000417652 ITGA6P23229 1130 aa8.64□□□□□ -1.03
NCL-203ENST00000417652 ZNF784Q8NCA9 323 aaPredicted RBP8.64□□□□□ -1.03
NCL-203ENST00000417652 PSMD1Q99460 953 aa8.64□□□□□ -1.03
NCL-203ENST00000417652 EYA3Q99504 573 aa8.64□□□□□ -1.03
NCL-203ENST00000417652 PLA2G12BQ9BX93 195 aa8.64□□□□□ -1.03
NCL-203ENST00000417652 RCAN3Q9UKA8 241 aa8.64□□□□□ -1.03
NCL-203ENST00000417652 TNRC6CQ9HCJ0 1690 aaKnown RBP8.64□□□□□ -1.03
NCL-203ENST00000417652 CCDC88AQ3V6T2 1871 aa8.64□□□□□ -1.03
NCL-203ENST00000417652 LTBP3Q9NS15 1303 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 RIMBP2O15034 1052 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 GNAI3P08754 354 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 NBPF7P0C2Y1 421 aaPredicted RBP8.63□□□□□ -1.03
NCL-203ENST00000417652 IARSP41252 1262 aaKnown RBP8.63□□□□□ -1.03
NCL-203ENST00000417652 KCNJ4P48050 445 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 EIF6P56537 245 aaKnown RBP8.63□□□□□ -1.03
NCL-203ENST00000417652 WASHC4Q2M389 1173 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
NCL-203ENST00000417652 DZIP1LQ8IYY4 767 aaKnown RBP8.63□□□□□ -1.03
NCL-203ENST00000417652 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.63□□□□□ -1.03
NCL-203ENST00000417652 SUCLG2Q96I99 432 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 ZC3H12CQ9C0D7 883 aaKnown RBP8.63□□□□□ -1.03
NCL-203ENST00000417652 USP44Q9H0E7 712 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 CNNM1Q9NRU3 951 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 GGA1Q9UJY5 639 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 TAF1P21675 1872 aa8.63□□□□□ -1.03
NCL-203ENST00000417652 DDX60Q8IY21 1712 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms