RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 TSNAXIP1Q2TAA8 658 aa10.63□□□□□ -0.71
SP140-204ENST00000417495 PRIMPOLQ96LW4 560 aa10.63□□□□□ -0.71
SP140-204ENST00000417495 ZMIZ1Q9ULJ6 1067 aa10.63□□□□□ -0.71
SP140-204ENST00000417495 NOL7Q9UMY1 257 aaKnown RBP10.63□□□□□ -0.71
SP140-204ENST00000417495 TPD52L2O43399 206 aaKnown RBP10.62□□□□□ -0.71
SP140-204ENST00000417495 VAC14Q08AM6 782 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 UVSSAQ2YD98 709 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 ZNF710Q8N1W2 664 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 LNPKQ9C0E8 428 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 NUB1Q9Y5A7 615 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 USP19O94966 1318 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 PRKAR2BP31323 418 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 CLK2P49760 499 aaKnown RBP10.62□□□□□ -0.71
SP140-204ENST00000417495 TSR1Q2NL82 804 aaKnown RBP10.62□□□□□ -0.71
SP140-204ENST00000417495 ZKSCAN2Q63HK3 967 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 RASSF4Q9H2L5 321 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 ANAPC4Q9UJX5 808 aa10.62□□□□□ -0.71
SP140-204ENST00000417495 ANKRD33BA6NCL7 494 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 U2SURPO15042 1029 aaKnown RBP10.61□□□□□ -0.71
SP140-204ENST00000417495 EIF4A2Q14240 407 aaKnown RBP10.61□□□□□ -0.71
SP140-204ENST00000417495 QPCTQ16769 361 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 TSPYL2Q9H2G4 693 aaPredicted RBP10.61□□□□□ -0.71
SP140-204ENST00000417495 CXorf56Q9H5V9 222 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 PAXBP1Q9Y5B6 917 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 CRB1P82279 1406 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 IBTKQ9P2D0 1353 aaPredicted RBP10.61□□□□□ -0.71
SP140-204ENST00000417495 SCP2P22307 547 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 BIRC2Q13490 618 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 C1QTNF12Q5T7M4 302 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 DDX46Q7L014 1031 aaKnown RBP10.61□□□□□ -0.71
SP140-204ENST00000417495 DDX12PQ92771 950 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 EMILIN1Q9Y6C2 1016 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 RPS6KL1Q9Y6S9 549 aa10.61□□□□□ -0.71
SP140-204ENST00000417495 NEFHP12036 1026 aa10.6□□□□□ -0.71
SP140-204ENST00000417495 TMEM164Q5U3C3 297 aa10.6□□□□□ -0.71
SP140-204ENST00000417495 PIF1Q9H611 641 aa10.6□□□□□ -0.71
SP140-204ENST00000417495 STRCP1A6NGW2 1772 aa10.6□□□□□ -0.71
SP140-204ENST00000417495 KDM3BQ7LBC6 1761 aa10.6□□□□□ -0.71
SP140-204ENST00000417495 NLRP6P59044 892 aa10.6□□□□□ -0.71
SP140-204ENST00000417495 KCNH5Q8NCM2 988 aa10.6□□□□□ -0.71
SP140-204ENST00000417495 PTGDRQ13258 359 aa10.59□□□□□ -0.71
SP140-204ENST00000417495 MVPQ14764 893 aaKnown RBP10.59□□□□□ -0.71
SP140-204ENST00000417495 CCDC91Q7Z6B0 441 aa10.59□□□□□ -0.71
SP140-204ENST00000417495 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
SP140-204ENST00000417495 NOL10Q9BSC4 688 aaKnown RBP10.59□□□□□ -0.71
SP140-204ENST00000417495 NUCKS1Q9H1E3 243 aaKnown RBP10.59□□□□□ -0.71
SP140-204ENST00000417495 GSCP56915 257 aaPredicted RBP10.59□□□□□ -0.71
SP140-204ENST00000417495 DSG2Q14126 1118 aa10.59□□□□□ -0.71
SP140-204ENST00000417495 DNAJC21Q5F1R6 531 aaKnown RBP10.59□□□□□ -0.71
SP140-204ENST00000417495 C20orf194Q5TEA3 1177 aa10.59□□□□□ -0.71
SP140-204ENST00000417495 DHX38Q92620 1227 aaKnown RBP10.59□□□□□ -0.71
SP140-204ENST00000417495 BCAR3O75815 825 aa10.59□□□□□ -0.71
SP140-204ENST00000417495 ZRSR2Q15696 482 aaKnown RBP10.59□□□□□ -0.71
SP140-204ENST00000417495 PDCL2Q8N4E4 241 aa10.59□□□□□ -0.71
SP140-204ENST00000417495 DDX19BQ9UMR2 479 aa10.59□□□□□ -0.71
SP140-204ENST00000417495 SMC3Q9UQE7 1217 aa10.59□□□□□ -0.71
SP140-204ENST00000417495 C1orf167Q5SNV9 1468 aa10.58□□□□□ -0.72
SP140-204ENST00000417495 XIRP1Q702N8 1843 aaKnown RBP10.58□□□□□ -0.72
SP140-204ENST00000417495 MAP3K19Q56UN5 1328 aa10.58□□□□□ -0.72
SP140-204ENST00000417495 SIPA1L3O60292 1781 aaPredicted RBP10.58□□□□□ -0.72
SP140-204ENST00000417495 GAS2L2Q8NHY3 880 aa10.58□□□□□ -0.72
SP140-204ENST00000417495 COL18A1P39060 1754 aa10.58□□□□□ -0.72
SP140-204ENST00000417495 CHL1O00533 1208 aa10.58□□□□□ -0.72
SP140-204ENST00000417495 TERF2Q15554 542 aa10.58□□□□□ -0.72
SP140-204ENST00000417495 ATF7IPQ6VMQ6 1270 aa10.58□□□□□ -0.72
SP140-204ENST00000417495 SUDS3Q9H7L9 328 aaPredicted RBP10.58□□□□□ -0.72
SP140-204ENST00000417495 PXDNLA1KZ92 1463 aa10.58□□□□□ -0.72
SP140-204ENST00000417495 GOLGA6CA6NDK9 693 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 GOLGA6BA6NDN3 693 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 PLIN1O60240 522 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 GOLGA6DP0CG33 693 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 RPAINQ86UA6 219 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 DZIP1LQ8IYY4 767 aaKnown RBP10.57□□□□□ -0.72
SP140-204ENST00000417495 NGDNQ8NEJ9 315 aaKnown RBP10.57□□□□□ -0.72
SP140-204ENST00000417495 HMX1Q9NP08 348 aaPredicted RBP10.57□□□□□ -0.72
SP140-204ENST00000417495 GPCPD1Q9NPB8 672 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 GOLGA6AQ9NYA3 693 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 GABBR1Q9UBS5 961 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 PARP4Q9UKK3 1724 aaKnown RBP10.57□□□□□ -0.72
SP140-204ENST00000417495 CCDC196A0A1B0GTZ2 297 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 TPM3P06753 285 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 EXOSC9Q06265 439 aaKnown RBP10.57□□□□□ -0.72
SP140-204ENST00000417495 ABCC4O15439 1325 aa10.57□□□□□ -0.72
SP140-204ENST00000417495 VAMP4O75379 141 aa10.56□□□□□ -0.72
SP140-204ENST00000417495 MCM4P33991 863 aa10.56□□□□□ -0.72
SP140-204ENST00000417495 APBB1IPQ7Z5R6 666 aaPredicted RBP10.56□□□□□ -0.72
SP140-204ENST00000417495 TBC1D22AQ8WUA7 517 aa10.56□□□□□ -0.72
SP140-204ENST00000417495 IP6K1Q92551 441 aa10.56□□□□□ -0.72
SP140-204ENST00000417495 RWDD1Q9H446 243 aaPredicted RBP10.56□□□□□ -0.72
SP140-204ENST00000417495 CDHR5Q9HBB8 845 aa10.56□□□□□ -0.72
SP140-204ENST00000417495 RRP7AQ9Y3A4 280 aaKnown RBP10.56□□□□□ -0.72
SP140-204ENST00000417495 PAX7P23759 505 aa10.55□□□□□ -0.72
SP140-204ENST00000417495 CASQ1P31415 396 aa10.55□□□□□ -0.72
SP140-204ENST00000417495 MRPL50Q8N5N7 158 aaKnown RBP10.55□□□□□ -0.72
SP140-204ENST00000417495 ERCC4Q92889 916 aaPredicted RBP10.55□□□□□ -0.72
SP140-204ENST00000417495 TNPO1Q92973 898 aaKnown RBP10.55□□□□□ -0.72
SP140-204ENST00000417495 PHACTR3Q96KR7 559 aa10.55□□□□□ -0.72
SP140-204ENST00000417495 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
SP140-204ENST00000417495 STRCQ7RTU9 1775 aa10.55□□□□□ -0.72
SP140-204ENST00000417495 GOLGA6L6A8MZA4 724 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms