RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 TWISTNBQ3B726 338 aaPredicted RBP23.03■■□□□ 1.28
CPNE1-210ENST00000416778 SUPT20HQ8NEM7 779 aa23.03■■□□□ 1.28
CPNE1-210ENST00000416778 KLRG1Q96E93 195 aa23.03■■□□□ 1.28
CPNE1-210ENST00000416778 ANKRD36CQ5JPF3 1778 aa23.03■■□□□ 1.28
CPNE1-210ENST00000416778 COL4A5P29400 1685 aa23.03■■□□□ 1.28
CPNE1-210ENST00000416778 PPIP5K2O43314 1243 aa23.02■■□□□ 1.28
CPNE1-210ENST00000416778 AOC3Q16853 763 aa23.02■■□□□ 1.28
CPNE1-210ENST00000416778 DPP8Q6V1X1 898 aaPredicted RBP23.02■■□□□ 1.28
CPNE1-210ENST00000416778 KSR2Q6VAB6 950 aa23.02■■□□□ 1.28
CPNE1-210ENST00000416778 TMC4Q7Z404 712 aa23.02■■□□□ 1.28
CPNE1-210ENST00000416778 CELF1Q92879 486 aaKnown RBP23.02■■□□□ 1.28
CPNE1-210ENST00000416778 SLC4A2P04920 1241 aa23.01■■□□□ 1.27
CPNE1-210ENST00000416778 EPHX2P34913 555 aa23.01■■□□□ 1.27
CPNE1-210ENST00000416778 LDHDQ86WU2 507 aa23.01■■□□□ 1.27
CPNE1-210ENST00000416778 MAP3K2Q9Y2U5 619 aa23.01■■□□□ 1.27
CPNE1-210ENST00000416778 GJA3Q9Y6H8 435 aa23.01■■□□□ 1.27
CPNE1-210ENST00000416778 PI4KAP2A4QPH2 592 aa23■■□□□ 1.27
CPNE1-210ENST00000416778 PCCAP05165 728 aaPredicted RBP23■■□□□ 1.27
CPNE1-210ENST00000416778 G2E3Q7L622 706 aa23■■□□□ 1.27
CPNE1-210ENST00000416778 NIM1KQ8IY84 436 aa23■■□□□ 1.27
CPNE1-210ENST00000416778 PI4KAP1Q8N8J0 262 aa23■■□□□ 1.27
CPNE1-210ENST00000416778 JARID2Q92833 1246 aaPredicted RBP23■■□□□ 1.27
CPNE1-210ENST00000416778 CWC25Q9NXE8 425 aaPredicted RBP23■■□□□ 1.27
CPNE1-210ENST00000416778 VAMP4O75379 141 aa22.99■■□□□ 1.27
CPNE1-210ENST00000416778 RPS8P62241 208 aaKnown RBP22.99■■□□□ 1.27
CPNE1-210ENST00000416778 PNMA8AQ86V59 439 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-210ENST00000416778 FAM9BQ8IZU0 186 aa22.99■■□□□ 1.27
CPNE1-210ENST00000416778 STK31Q9BXU1 1019 aa22.99■■□□□ 1.27
CPNE1-210ENST00000416778 ZNRF3Q9ULT6 936 aa22.99■■□□□ 1.27
CPNE1-210ENST00000416778 ITGBL1O95965 494 aaPredicted RBP22.98■■□□□ 1.27
CPNE1-210ENST00000416778 IGKV5-2P06315 115 aa22.98■■□□□ 1.27
CPNE1-210ENST00000416778 CXCL9Q07325 125 aa22.98■■□□□ 1.27
CPNE1-210ENST00000416778 KIAA2012Q0VF49 1180 aa22.98■■□□□ 1.27
CPNE1-210ENST00000416778 JMYQ8N9B5 988 aa22.98■■□□□ 1.27
CPNE1-210ENST00000416778 HSP90B1P14625 803 aaKnown RBP22.97■■□□□ 1.27
CPNE1-210ENST00000416778 EAPPQ56P03 285 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-210ENST00000416778 SPINK5Q9NQ38 1064 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-210ENST00000416778 FANCIQ9NVI1 1328 aa22.97■■□□□ 1.27
CPNE1-210ENST00000416778 PDE8AO60658 829 aa22.96■■□□□ 1.27
CPNE1-210ENST00000416778 EPS15P42566 896 aa22.96■■□□□ 1.27
CPNE1-210ENST00000416778 SCNN1DP51172 638 aa22.96■■□□□ 1.27
CPNE1-210ENST00000416778 SEC31BQ9NQW1 1179 aa22.96■■□□□ 1.27
CPNE1-210ENST00000416778 NSFL1CQ9UNZ2 370 aaKnown RBP22.96■■□□□ 1.27
CPNE1-210ENST00000416778 CLEC11AQ9Y240 323 aa22.96■■□□□ 1.27
CPNE1-210ENST00000416778 LAMB2P55268 1798 aa22.96■■□□□ 1.27
CPNE1-210ENST00000416778 SCN4AP35499 1836 aa22.95■■□□□ 1.26
CPNE1-210ENST00000416778 PASKQ96RG2 1323 aa22.95■■□□□ 1.26
CPNE1-210ENST00000416778 GPSM2P81274 684 aa22.94■■□□□ 1.26
CPNE1-210ENST00000416778 EXOSC9Q06265 439 aaKnown RBP22.94■■□□□ 1.26
CPNE1-210ENST00000416778 POLLQ9UGP5 575 aa22.94■■□□□ 1.26
CPNE1-210ENST00000416778 CNTROBQ8N137 903 aa22.93■■□□□ 1.26
CPNE1-210ENST00000416778 TAF1P21675 1872 aa22.93■■□□□ 1.26
CPNE1-210ENST00000416778 DDX60Q8IY21 1712 aaKnown RBP22.93■■□□□ 1.26
CPNE1-210ENST00000416778 LMOD1P29536 600 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-210ENST00000416778 WASHC4Q2M389 1173 aa22.92■■□□□ 1.26
CPNE1-210ENST00000416778 CCDC152Q4G0S7 254 aa22.92■■□□□ 1.26
CPNE1-210ENST00000416778 CREBZFQ9NS37 354 aa22.92■■□□□ 1.26
CPNE1-210ENST00000416778 CDHR2Q9BYE9 1310 aa22.91■■□□□ 1.26
CPNE1-210ENST00000416778 YDJCA8MPS7 323 aa22.91■■□□□ 1.26
CPNE1-210ENST00000416778 NEURL1BA8MQ27 555 aa22.91■■□□□ 1.26
CPNE1-210ENST00000416778 H7C1W4 665 aa22.91■■□□□ 1.26
CPNE1-210ENST00000416778 NEXNQ0ZGT2 675 aa22.91■■□□□ 1.26
CPNE1-210ENST00000416778 FLIIQ13045 1269 aa22.91■■□□□ 1.26
CPNE1-210ENST00000416778 CWF19L2Q2TBE0 894 aaKnown RBP22.91■■□□□ 1.26
CPNE1-210ENST00000416778 MAP1SQ66K74 1059 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-210ENST00000416778 GPRC5DQ9NZD1 345 aa22.91■■□□□ 1.26
CPNE1-210ENST00000416778 PCNTO95613 3336 aa22.9■■□□□ 1.26
CPNE1-210ENST00000416778 RAD17O75943 681 aa22.9■■□□□ 1.26
CPNE1-210ENST00000416778 TNIP1Q15025 636 aa22.9■■□□□ 1.26
CPNE1-210ENST00000416778 CIAPIN1Q6FI81 312 aa22.9■■□□□ 1.26
CPNE1-210ENST00000416778 USP50Q70EL3 339 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-210ENST00000416778 C6orf229H3BNL8 230 aa22.89■■□□□ 1.25
CPNE1-210ENST00000416778 TTLL11Q8NHH1 800 aa22.89■■□□□ 1.25
CPNE1-210ENST00000416778 TBC1D16Q8TBP0 767 aa22.89■■□□□ 1.25
CPNE1-210ENST00000416778 CCDC85AQ96PX6 553 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-210ENST00000416778 PODXL2Q9NZ53 605 aa22.89■■□□□ 1.25
CPNE1-210ENST00000416778 COL4A1P02462 1669 aa22.89■■□□□ 1.25
CPNE1-210ENST00000416778 RIMBP2O15034 1052 aa22.88■■□□□ 1.25
CPNE1-210ENST00000416778 GMPSP49915 693 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-210ENST00000416778 GCKRQ14397 625 aa22.87■■□□□ 1.25
CPNE1-210ENST00000416778 DNAAF4Q8WXU2 420 aa22.87■■□□□ 1.25
CPNE1-210ENST00000416778 MYH16Q9H6N6 1097 aa22.87■■□□□ 1.25
CPNE1-210ENST00000416778 CTSWP56202 376 aa22.86■■□□□ 1.25
CPNE1-210ENST00000416778 FKBP5Q13451 457 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-210ENST00000416778 EYA3Q99504 573 aa22.86■■□□□ 1.25
CPNE1-210ENST00000416778 ADARB2Q9NS39 739 aaKnown RBP22.86■■□□□ 1.25
CPNE1-210ENST00000416778 LTBP1Q14766 1721 aa22.85■■□□□ 1.25
CPNE1-210ENST00000416778 DUOX1Q9NRD9 1551 aa22.85■■□□□ 1.25
CPNE1-210ENST00000416778 TMEM88BA6NKF7 163 aa22.85■■□□□ 1.25
CPNE1-210ENST00000416778 DOK7Q18PE1 504 aa22.85■■□□□ 1.25
CPNE1-210ENST00000416778 ANKRD18AQ8IVF6 992 aa22.85■■□□□ 1.25
CPNE1-210ENST00000416778 LINS1Q8NG48 757 aa22.85■■□□□ 1.25
CPNE1-210ENST00000416778 GPR101Q96P66 508 aaPredicted RBP22.85■■□□□ 1.25
CPNE1-210ENST00000416778 DBNDD1Q9H9R9 158 aa22.85■■□□□ 1.25
CPNE1-210ENST00000416778 KCNQ5Q9NR82 932 aa22.85■■□□□ 1.25
CPNE1-210ENST00000416778 ZNF521Q96K83 1311 aa22.84■■□□□ 1.25
CPNE1-210ENST00000416778 ADAMTSL1Q8N6G6 1762 aa22.84■■□□□ 1.25
CPNE1-210ENST00000416778 CASP7P55210 303 aa22.84■■□□□ 1.25
CPNE1-210ENST00000416778 BCL2L13Q9BXK5 485 aa22.84■■□□□ 1.25
CPNE1-210ENST00000416778 ZC3H12CQ9C0D7 883 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms