RNA–Protein interactions for RNA: ENST00000416469.6

SMIM19-202, Transcript of small integral membrane protein 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM19, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-202ENST00000416469 SCNN1DP51172 638 aa23.74■■□□□ 1.39
SMIM19-202ENST00000416469 TMC4Q7Z404 712 aa23.74■■□□□ 1.39
SMIM19-202ENST00000416469 MKRN1Q9UHC7 482 aaKnown RBP23.74■■□□□ 1.39
SMIM19-202ENST00000416469 GOLGA2Q08379 1002 aa23.73■■□□□ 1.39
SMIM19-202ENST00000416469 TRIM28Q13263 835 aaKnown RBP23.73■■□□□ 1.39
SMIM19-202ENST00000416469 MAP1SQ66K74 1059 aaPredicted RBP23.73■■□□□ 1.39
SMIM19-202ENST00000416469 PHAXQ9H814 394 aaKnown RBP23.73■■□□□ 1.39
SMIM19-202ENST00000416469 DUOX1Q9NRD9 1551 aa23.73■■□□□ 1.39
SMIM19-202ENST00000416469 TMEM88BA6NKF7 163 aa23.72■■□□□ 1.39
SMIM19-202ENST00000416469 EPS15P42566 896 aa23.72■■□□□ 1.39
SMIM19-202ENST00000416469 SF3B3Q15393 1217 aaKnown RBP23.72■■□□□ 1.39
SMIM19-202ENST00000416469 CCDC184Q52MB2 194 aa23.72■■□□□ 1.39
SMIM19-202ENST00000416469 RIC3Q7Z5B4 369 aa23.72■■□□□ 1.39
SMIM19-202ENST00000416469 CNTROBQ8N137 903 aa23.72■■□□□ 1.39
SMIM19-202ENST00000416469 ZNRF3Q9ULT6 936 aa23.72■■□□□ 1.39
SMIM19-202ENST00000416469 CNTNAP1P78357 1384 aa23.71■■□□□ 1.39
SMIM19-202ENST00000416469 HSPA1AP0DMV8 641 aaKnown RBP23.71■■□□□ 1.39
SMIM19-202ENST00000416469 HSPA1BP0DMV9 641 aaKnown RBP23.71■■□□□ 1.39
SMIM19-202ENST00000416469 KIAA2012Q0VF49 1180 aa23.71■■□□□ 1.39
SMIM19-202ENST00000416469 C8orf58Q8NAV2 365 aa23.71■■□□□ 1.39
SMIM19-202ENST00000416469 COL4A1P02462 1669 aa23.7■■□□□ 1.38
SMIM19-202ENST00000416469 IRS4O14654 1257 aaPredicted RBP23.69■■□□□ 1.38
SMIM19-202ENST00000416469 CXCL9Q07325 125 aa23.69■■□□□ 1.38
SMIM19-202ENST00000416469 RTL5Q5HYW3 569 aaPredicted RBP23.69■■□□□ 1.38
SMIM19-202ENST00000416469 COL13A1Q5TAT6 717 aaPredicted RBP23.69■■□□□ 1.38
SMIM19-202ENST00000416469 TRPM7Q96QT4 1865 aa23.68■■□□□ 1.38
SMIM19-202ENST00000416469 USP50Q70EL3 339 aaPredicted RBP23.68■■□□□ 1.38
SMIM19-202ENST00000416469 CELF1Q92879 486 aaKnown RBP23.68■■□□□ 1.38
SMIM19-202ENST00000416469 CHMP4AQ9BY43 222 aa23.68■■□□□ 1.38
SMIM19-202ENST00000416469 CCDC30Q5VVM6 783 aa23.67■■□□□ 1.38
SMIM19-202ENST00000416469 ZBTB38Q8NAP3 1195 aaPredicted RBP23.67■■□□□ 1.38
SMIM19-202ENST00000416469 GPRC5DQ9NZD1 345 aa23.67■■□□□ 1.38
SMIM19-202ENST00000416469 CIAPIN1Q6FI81 312 aa23.66■■□□□ 1.38
SMIM19-202ENST00000416469 MYD88Q99836 296 aa23.66■■□□□ 1.38
SMIM19-202ENST00000416469 CCDC27Q2M243 656 aa23.65■■□□□ 1.38
SMIM19-202ENST00000416469 TSPYL6Q8N831 410 aa23.65■■□□□ 1.38
SMIM19-202ENST00000416469 ADARB2Q9NS39 739 aaKnown RBP23.65■■□□□ 1.38
SMIM19-202ENST00000416469 CDHR2Q9BYE9 1310 aa23.64■■□□□ 1.38
SMIM19-202ENST00000416469 HSP90B1P14625 803 aaKnown RBP23.64■■□□□ 1.37
SMIM19-202ENST00000416469 ZEB1P37275 1124 aaPredicted RBP23.64■■□□□ 1.37
SMIM19-202ENST00000416469 GMPSP49915 693 aaPredicted RBP23.64■■□□□ 1.37
SMIM19-202ENST00000416469 TNIP1Q15025 636 aa23.64■■□□□ 1.37
SMIM19-202ENST00000416469 CCDC191Q8NCU4 936 aa23.64■■□□□ 1.37
SMIM19-202ENST00000416469 TSR2Q969E8 191 aaKnown RBP23.64■■□□□ 1.37
SMIM19-202ENST00000416469 RAD17O75943 681 aa23.63■■□□□ 1.37
SMIM19-202ENST00000416469 DDX58O95786 925 aaKnown RBP23.63■■□□□ 1.37
SMIM19-202ENST00000416469 PCCAP05165 728 aaPredicted RBP23.63■■□□□ 1.37
SMIM19-202ENST00000416469 VEGFBP49765 207 aa23.63■■□□□ 1.37
SMIM19-202ENST00000416469 METTL22Q9BUU2 404 aaPredicted RBP23.63■■□□□ 1.37
SMIM19-202ENST00000416469 NSFL1CQ9UNZ2 370 aaKnown RBP23.63■■□□□ 1.37
SMIM19-202ENST00000416469 YDJCA8MPS7 323 aa23.62■■□□□ 1.37
SMIM19-202ENST00000416469 GPSM2P81274 684 aa23.62■■□□□ 1.37
SMIM19-202ENST00000416469 WASHC4Q2M389 1173 aa23.62■■□□□ 1.37
SMIM19-202ENST00000416469 WWC1Q8IX03 1113 aa23.62■■□□□ 1.37
SMIM19-202ENST00000416469 CWC25Q9NXE8 425 aaPredicted RBP23.62■■□□□ 1.37
SMIM19-202ENST00000416469 MYH3P11055 1940 aa23.61■■□□□ 1.37
SMIM19-202ENST00000416469 RASSF10A6NK89 507 aa23.61■■□□□ 1.37
SMIM19-202ENST00000416469 RPS8P62241 208 aaKnown RBP23.61■■□□□ 1.37
SMIM19-202ENST00000416469 BCL2L13Q9BXK5 485 aa23.61■■□□□ 1.37
SMIM19-202ENST00000416469 POLLQ9UGP5 575 aa23.61■■□□□ 1.37
SMIM19-202ENST00000416469 C6orf229H3BNL8 230 aa23.59■■□□□ 1.37
SMIM19-202ENST00000416469 FMR1Q06787 632 aaKnown RBP eCLIP23.59■■□□□ 1.37
SMIM19-202ENST00000416469 DEFB115Q30KQ5 88 aa23.59■■□□□ 1.37
SMIM19-202ENST00000416469 STK31Q9BXU1 1019 aa23.59■■□□□ 1.37
SMIM19-202ENST00000416469 MRS2Q9HD23 443 aa23.59■■□□□ 1.37
SMIM19-202ENST00000416469 SEC31BQ9NQW1 1179 aa23.59■■□□□ 1.37
SMIM19-202ENST00000416469 ABT1Q9ULW3 272 aaKnown RBP23.59■■□□□ 1.37
SMIM19-202ENST00000416469 MAP3K2Q9Y2U5 619 aa23.59■■□□□ 1.37
SMIM19-202ENST00000416469 CACNA1FO60840 1977 aa23.59■■□□□ 1.37
SMIM19-202ENST00000416469 PDE8AO60658 829 aa23.58■■□□□ 1.37
SMIM19-202ENST00000416469 CCDC152Q4G0S7 254 aa23.58■■□□□ 1.37
SMIM19-202ENST00000416469 NCBP3Q53F19 620 aaKnown RBP23.58■■□□□ 1.37
SMIM19-202ENST00000416469 KSR2Q6VAB6 950 aa23.58■■□□□ 1.37
SMIM19-202ENST00000416469 TNS4Q8IZW8 715 aa23.58■■□□□ 1.37
SMIM19-202ENST00000416469 JARID2Q92833 1246 aaPredicted RBP23.58■■□□□ 1.37
SMIM19-202ENST00000416469 EYA3Q99504 573 aa23.58■■□□□ 1.37
SMIM19-202ENST00000416469 DBNDD1Q9H9R9 158 aa23.58■■□□□ 1.37
SMIM19-202ENST00000416469 IL16Q14005 1332 aa23.58■■□□□ 1.36
SMIM19-202ENST00000416469 TRAF5O00463 557 aa23.57■■□□□ 1.36
SMIM19-202ENST00000416469 RIMBP2O15034 1052 aa23.57■■□□□ 1.36
SMIM19-202ENST00000416469 TWISTNBQ3B726 338 aaPredicted RBP23.57■■□□□ 1.36
SMIM19-202ENST00000416469 TBC1D16Q8TBP0 767 aa23.57■■□□□ 1.36
SMIM19-202ENST00000416469 PI4KAP2A4QPH2 592 aa23.56■■□□□ 1.36
SMIM19-202ENST00000416469 PI4KAP1Q8N8J0 262 aa23.56■■□□□ 1.36
SMIM19-202ENST00000416469 PODXL2Q9NZ53 605 aa23.56■■□□□ 1.36
SMIM19-202ENST00000416469 PGAP2Q9UHJ9 254 aa23.56■■□□□ 1.36
SMIM19-202ENST00000416469 CNOT7Q9UIV1 285 aaKnown RBP23.56■■□□□ 1.36
SMIM19-202ENST00000416469 SCN9AQ15858 1988 aa23.56■■□□□ 1.36
SMIM19-202ENST00000416469 SPEF2Q9C093 1822 aa23.55■■□□□ 1.36
SMIM19-202ENST00000416469 ZNF316A6NFI3 1004 aaPredicted RBP23.55■■□□□ 1.36
SMIM19-202ENST00000416469 PSMD14O00487 310 aa23.55■■□□□ 1.36
SMIM19-202ENST00000416469 ANP32CO43423 234 aa23.55■■□□□ 1.36
SMIM19-202ENST00000416469 IGKV5-2P06315 115 aa23.55■■□□□ 1.36
SMIM19-202ENST00000416469 SHTN1A0MZ66 631 aa23.54■■□□□ 1.36
SMIM19-202ENST00000416469 FOXN1O15353 648 aa23.54■■□□□ 1.36
SMIM19-202ENST00000416469 ECE2O60344 883 aa23.54■■□□□ 1.36
SMIM19-202ENST00000416469 HIRAP54198 1017 aaPredicted RBP23.54■■□□□ 1.36
SMIM19-202ENST00000416469 NEXNQ0ZGT2 675 aa23.54■■□□□ 1.36
SMIM19-202ENST00000416469 CST9Q5W186 159 aa23.54■■□□□ 1.36
SMIM19-202ENST00000416469 MICALL2Q8IY33 904 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms