RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 SEC31BQ9NQW1 1179 aa16.11■□□□□ 0.17
YIPF3-203ENST00000416380 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
YIPF3-203ENST00000416380 CTSWP56202 376 aa16.1■□□□□ 0.17
YIPF3-203ENST00000416380 RABL6Q3YEC7 729 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-203ENST00000416380 TMEM57Q8N5G2 664 aa16.1■□□□□ 0.17
YIPF3-203ENST00000416380 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
YIPF3-203ENST00000416380 CELF1Q92879 486 aaKnown RBP16.1■□□□□ 0.17
YIPF3-203ENST00000416380 CNKSR1Q969H4 720 aa16.1■□□□□ 0.17
YIPF3-203ENST00000416380 ZNF622Q969S3 477 aaKnown RBP eCLIP16.1■□□□□ 0.17
YIPF3-203ENST00000416380 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
YIPF3-203ENST00000416380 NFKBIEO00221 500 aa16.09■□□□□ 0.17
YIPF3-203ENST00000416380 PLIN1O60240 522 aa16.09■□□□□ 0.17
YIPF3-203ENST00000416380 C20orf194Q5TEA3 1177 aa16.09■□□□□ 0.17
YIPF3-203ENST00000416380 CLUAP1Q96AJ1 413 aa16.09■□□□□ 0.17
YIPF3-203ENST00000416380 MEIS3Q99687 375 aa16.09■□□□□ 0.17
YIPF3-203ENST00000416380 GREM2Q9H772 168 aa16.09■□□□□ 0.17
YIPF3-203ENST00000416380 NPHP1O15259 732 aa16.08■□□□□ 0.16
YIPF3-203ENST00000416380 GRAPQ13588 217 aa16.08■□□□□ 0.16
YIPF3-203ENST00000416380 GRAPLQ8TC17 118 aaPredicted RBP16.08■□□□□ 0.16
YIPF3-203ENST00000416380 C21orf2O43822 256 aa16.07■□□□□ 0.16
YIPF3-203ENST00000416380 ALDH1B1P30837 517 aa16.07■□□□□ 0.16
YIPF3-203ENST00000416380 PANK1Q8TE04 598 aa16.07■□□□□ 0.16
YIPF3-203ENST00000416380 RBM17Q96I25 401 aaKnown RBP16.07■□□□□ 0.16
YIPF3-203ENST00000416380 LRRC37AA6NMS7 1700 aa16.07■□□□□ 0.16
YIPF3-203ENST00000416380 LTBP1Q14766 1721 aa16.07■□□□□ 0.16
YIPF3-203ENST00000416380 TAF1P21675 1872 aa16.07■□□□□ 0.16
YIPF3-203ENST00000416380 DUOX1Q9NRD9 1551 aa16.06■□□□□ 0.16
YIPF3-203ENST00000416380 ZBTB7BO15156 539 aaPredicted RBP16.06■□□□□ 0.16
YIPF3-203ENST00000416380 GPR162Q16538 588 aa16.06■□□□□ 0.16
YIPF3-203ENST00000416380 DZIP1LQ8IYY4 767 aaKnown RBP16.06■□□□□ 0.16
YIPF3-203ENST00000416380 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
YIPF3-203ENST00000416380 C9orf78Q9NZ63 289 aaPredicted RBP16.06■□□□□ 0.16
YIPF3-203ENST00000416380 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
YIPF3-203ENST00000416380 BBOX1O75936 387 aa16.05■□□□□ 0.16
YIPF3-203ENST00000416380 RFX5P48382 616 aaPredicted RBP16.05■□□□□ 0.16
YIPF3-203ENST00000416380 FAM161AQ3B820 660 aa16.05■□□□□ 0.16
YIPF3-203ENST00000416380 CCDC152Q4G0S7 254 aa16.05■□□□□ 0.16
YIPF3-203ENST00000416380 LMBR1LQ6UX01 489 aa16.05■□□□□ 0.16
YIPF3-203ENST00000416380 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
YIPF3-203ENST00000416380 BICC1Q9H694 974 aaKnown RBP16.05■□□□□ 0.16
YIPF3-203ENST00000416380 ATP6V0A2Q9Y487 856 aa16.05■□□□□ 0.16
YIPF3-203ENST00000416380 FER1L6Q2WGJ9 1857 aa16.04■□□□□ 0.16
YIPF3-203ENST00000416380 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
YIPF3-203ENST00000416380 DDX46Q7L014 1031 aaKnown RBP16.04■□□□□ 0.16
YIPF3-203ENST00000416380 SP8Q8IXZ3 490 aa16.04■□□□□ 0.16
YIPF3-203ENST00000416380 COL4A5P29400 1685 aa16.03■□□□□ 0.16
YIPF3-203ENST00000416380 PPEF1O14829 653 aaPredicted RBP16.03■□□□□ 0.16
YIPF3-203ENST00000416380 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
YIPF3-203ENST00000416380 RPS8P62241 208 aaKnown RBP16.03■□□□□ 0.16
YIPF3-203ENST00000416380 WTIPA6NIX2 430 aaPredicted RBP16.02■□□□□ 0.16
YIPF3-203ENST00000416380 ITGA6P23229 1130 aa16.02■□□□□ 0.16
YIPF3-203ENST00000416380 RASSF7Q02833 373 aa16.02■□□□□ 0.16
YIPF3-203ENST00000416380 MTX1Q13505 466 aa16.02■□□□□ 0.16
YIPF3-203ENST00000416380 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
YIPF3-203ENST00000416380 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
YIPF3-203ENST00000416380 RTFDC1Q9BY42 306 aaPredicted RBP16.02■□□□□ 0.16
YIPF3-203ENST00000416380 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
YIPF3-203ENST00000416380 MYH3P11055 1940 aa16.02■□□□□ 0.15
YIPF3-203ENST00000416380 RRP1P56182 461 aaKnown RBP16.01■□□□□ 0.15
YIPF3-203ENST00000416380 LRRFIP2Q9Y608 721 aaKnown RBP16.01■□□□□ 0.15
YIPF3-203ENST00000416380 CACNA1SQ13698 1873 aa16.01■□□□□ 0.15
YIPF3-203ENST00000416380 IRS2Q9Y4H2 1338 aa16■□□□□ 0.15
YIPF3-203ENST00000416380 CC2D2BQ6DHV5 1058 aa16■□□□□ 0.15
YIPF3-203ENST00000416380 ARHGAP27Q6ZUM4 889 aa16■□□□□ 0.15
YIPF3-203ENST00000416380 PSMD1Q99460 953 aa16■□□□□ 0.15
YIPF3-203ENST00000416380 BSDC1Q9NW68 430 aaPredicted RBP16■□□□□ 0.15
YIPF3-203ENST00000416380 UBTFL1P0CB47 393 aaPredicted RBP15.99■□□□□ 0.15
YIPF3-203ENST00000416380 GPSM2P81274 684 aa15.99■□□□□ 0.15
YIPF3-203ENST00000416380 MVPQ14764 893 aaKnown RBP15.99■□□□□ 0.15
YIPF3-203ENST00000416380 CCDC93Q567U6 631 aa15.99■□□□□ 0.15
YIPF3-203ENST00000416380 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
YIPF3-203ENST00000416380 ZNF594Q96JF6 807 aaPredicted RBP15.99■□□□□ 0.15
YIPF3-203ENST00000416380 ZBTB40Q9NUA8 1239 aa15.99■□□□□ 0.15
YIPF3-203ENST00000416380 PODXL2Q9NZ53 605 aa15.99■□□□□ 0.15
YIPF3-203ENST00000416380 MINPP1Q9UNW1 487 aa15.99■□□□□ 0.15
YIPF3-203ENST00000416380 GNAI3P08754 354 aa15.98■□□□□ 0.15
YIPF3-203ENST00000416380 FKBP4Q02790 459 aaKnown RBP eCLIP15.98■□□□□ 0.15
YIPF3-203ENST00000416380 PTPN12Q05209 780 aaKnown RBP15.98■□□□□ 0.15
YIPF3-203ENST00000416380 SOGA3Q5TF21 947 aa15.98■□□□□ 0.15
YIPF3-203ENST00000416380 PUS3Q9BZE2 481 aaKnown RBP15.98■□□□□ 0.15
YIPF3-203ENST00000416380 POLLQ9UGP5 575 aa15.98■□□□□ 0.15
YIPF3-203ENST00000416380 COG6Q9Y2V7 657 aa15.98■□□□□ 0.15
YIPF3-203ENST00000416380 FTSJ3Q8IY81 847 aaKnown RBP15.97■□□□□ 0.15
YIPF3-203ENST00000416380 RTKN2Q8IZC4 609 aa15.97■□□□□ 0.15
YIPF3-203ENST00000416380 KLHDC4Q8TBB5 520 aa15.97■□□□□ 0.15
YIPF3-203ENST00000416380 RIPOR2Q9Y4F9 1068 aa15.97■□□□□ 0.15
YIPF3-203ENST00000416380 SBF1O95248 1867 aa15.97■□□□□ 0.15
YIPF3-203ENST00000416380 PNMA6EA0A0J9YXQ4 647 aa15.96■□□□□ 0.15
YIPF3-203ENST00000416380 ANKRD18BA2A2Z9 1011 aa15.96■□□□□ 0.15
YIPF3-203ENST00000416380 IFIT5Q13325 482 aaKnown RBP15.96■□□□□ 0.15
YIPF3-203ENST00000416380 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.15
YIPF3-203ENST00000416380 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
YIPF3-203ENST00000416380 CDC5LQ99459 802 aaKnown RBP15.96■□□□□ 0.15
YIPF3-203ENST00000416380 TAOK3Q9H2K8 898 aa15.96■□□□□ 0.15
YIPF3-203ENST00000416380 GNAI2P04899 355 aa15.95■□□□□ 0.14
YIPF3-203ENST00000416380 POLA2Q14181 598 aa15.95■□□□□ 0.14
YIPF3-203ENST00000416380 GRIPAP1Q4V328 841 aa15.95■□□□□ 0.14
YIPF3-203ENST00000416380 ATG9AQ7Z3C6 839 aa15.95■□□□□ 0.14
YIPF3-203ENST00000416380 SIRT2Q8IXJ6 389 aa15.95■□□□□ 0.14
YIPF3-203ENST00000416380 VGLL2Q8N8G2 317 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms