RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 LAMB2P55268 1798 aa24.93■■□□□ 1.58
FAM3A-207ENST00000416319 DLEC1Q9Y238 1755 aa24.93■■□□□ 1.58
FAM3A-207ENST00000416319 COL11A2P13942 1736 aaPredicted RBP24.92■■□□□ 1.58
FAM3A-207ENST00000416319 BCS1LQ9Y276 419 aa24.92■■□□□ 1.58
FAM3A-207ENST00000416319 GNAI3P08754 354 aa24.91■■□□□ 1.58
FAM3A-207ENST00000416319 FOXO4P98177 505 aa24.91■■□□□ 1.58
FAM3A-207ENST00000416319 PRPF40BQ6NWY9 871 aaKnown RBP24.91■■□□□ 1.58
FAM3A-207ENST00000416319 PLIN1O60240 522 aa24.9■■□□□ 1.58
FAM3A-207ENST00000416319 BBOX1O75936 387 aa24.9■■□□□ 1.58
FAM3A-207ENST00000416319 UBTFL1P0CB47 393 aaPredicted RBP24.9■■□□□ 1.58
FAM3A-207ENST00000416319 GRAPQ13588 217 aa24.9■■□□□ 1.58
FAM3A-207ENST00000416319 GRAPLQ8TC17 118 aaPredicted RBP24.9■■□□□ 1.58
FAM3A-207ENST00000416319 KAZALD1Q96I82 304 aa24.9■■□□□ 1.58
FAM3A-207ENST00000416319 SUCLG2Q96I99 432 aa24.9■■□□□ 1.58
FAM3A-207ENST00000416319 DCAF8L1A6NGE4 600 aa24.89■■□□□ 1.58
FAM3A-207ENST00000416319 GRIN3BO60391 1043 aa24.89■■□□□ 1.58
FAM3A-207ENST00000416319 YBX3P16989 372 aaKnown RBP eCLIP24.89■■□□□ 1.586e-6■□□□□ 10.6
FAM3A-207ENST00000416319 GPR162Q16538 588 aa24.89■■□□□ 1.58
FAM3A-207ENST00000416319 TMC4Q7Z404 712 aa24.89■■□□□ 1.58
FAM3A-207ENST00000416319 PANK1Q8TE04 598 aa24.89■■□□□ 1.58
FAM3A-207ENST00000416319 C7orf43Q8WVR3 580 aa24.89■■□□□ 1.58
FAM3A-207ENST00000416319 BRCA1P38398 1863 aaKnown RBP24.88■■□□□ 1.57
FAM3A-207ENST00000416319 RRP1P56182 461 aaKnown RBP24.88■■□□□ 1.57
FAM3A-207ENST00000416319 RABL6Q3YEC7 729 aaPredicted RBP24.88■■□□□ 1.57
FAM3A-207ENST00000416319 EPHA10Q5JZY3 1008 aa24.88■■□□□ 1.57
FAM3A-207ENST00000416319 ITPRIPQ8IWB1 547 aa24.88■■□□□ 1.57
FAM3A-207ENST00000416319 MEIS3Q99687 375 aa24.88■■□□□ 1.57
FAM3A-207ENST00000416319 SOGA3Q5TF21 947 aa24.87■■□□□ 1.57
FAM3A-207ENST00000416319 MVPQ14764 893 aaKnown RBP24.86■■□□□ 1.57
FAM3A-207ENST00000416319 CC2D2BQ6DHV5 1058 aa24.86■■□□□ 1.57
FAM3A-207ENST00000416319 LMBR1LQ6UX01 489 aa24.86■■□□□ 1.57
FAM3A-207ENST00000416319 GREM2Q9H772 168 aa24.86■■□□□ 1.57
FAM3A-207ENST00000416319 WWC3Q9ULE0 1092 aa24.86■■□□□ 1.57
FAM3A-207ENST00000416319 UTRNP46939 3433 aa24.86■■□□□ 1.57
FAM3A-207ENST00000416319 ZBTB7BO15156 539 aaPredicted RBP24.85■■□□□ 1.57
FAM3A-207ENST00000416319 RPS8P62241 208 aaKnown RBP24.85■■□□□ 1.57
FAM3A-207ENST00000416319 PELP1Q8IZL8 1130 aaKnown RBP24.85■■□□□ 1.57
FAM3A-207ENST00000416319 CDC5LQ99459 802 aaKnown RBP24.85■■□□□ 1.57
FAM3A-207ENST00000416319 BICC1Q9H694 974 aaKnown RBP24.85■■□□□ 1.57
FAM3A-207ENST00000416319 PPEF1O14829 653 aaPredicted RBP24.84■■□□□ 1.57
FAM3A-207ENST00000416319 GRIPAP1Q4V328 841 aa24.84■■□□□ 1.57
FAM3A-207ENST00000416319 ANKRD44Q8N8A2 993 aa24.84■■□□□ 1.57
FAM3A-207ENST00000416319 SEC31BQ9NQW1 1179 aa24.84■■□□□ 1.57
FAM3A-207ENST00000416319 DDX19BQ9UMR2 479 aa24.84■■□□□ 1.57
FAM3A-207ENST00000416319 ITGA6P23229 1130 aa24.83■■□□□ 1.57
FAM3A-207ENST00000416319 IFIT5Q13325 482 aaKnown RBP24.83■■□□□ 1.57
FAM3A-207ENST00000416319 FAM161AQ3B820 660 aa24.83■■□□□ 1.57
FAM3A-207ENST00000416319 CELF1Q92879 486 aaKnown RBP24.83■■□□□ 1.57
FAM3A-207ENST00000416319 CCDC85AQ96PX6 553 aaPredicted RBP24.83■■□□□ 1.57
FAM3A-207ENST00000416319 CHMP4BQ9H444 224 aaKnown RBP24.83■■□□□ 1.57
FAM3A-207ENST00000416319 ATP6V0A2Q9Y487 856 aa24.83■■□□□ 1.57
FAM3A-207ENST00000416319 C21orf2O43822 256 aa24.82■■□□□ 1.56
FAM3A-207ENST00000416319 GNAI2P04899 355 aa24.82■■□□□ 1.56
FAM3A-207ENST00000416319 C20orf194Q5TEA3 1177 aa24.82■■□□□ 1.56
FAM3A-207ENST00000416319 SP8Q8IXZ3 490 aa24.82■■□□□ 1.56
FAM3A-207ENST00000416319 ANKRD18BA2A2Z9 1011 aa24.81■■□□□ 1.56
FAM3A-207ENST00000416319 CCDC57Q2TAC2 916 aa24.81■■□□□ 1.56
FAM3A-207ENST00000416319 CCDC93Q567U6 631 aa24.81■■□□□ 1.56
FAM3A-207ENST00000416319 ANKRD18AQ8IVF6 992 aa24.81■■□□□ 1.56
FAM3A-207ENST00000416319 COG6Q9Y2V7 657 aa24.81■■□□□ 1.56
FAM3A-207ENST00000416319 LRRFIP2Q9Y608 721 aaKnown RBP24.81■■□□□ 1.56
FAM3A-207ENST00000416319 RTKN2Q8IZC4 609 aa24.8■■□□□ 1.56
FAM3A-207ENST00000416319 TMX4Q9H1E5 349 aaPredicted RBP24.8■■□□□ 1.56
FAM3A-207ENST00000416319 SLX4Q8IY92 1834 aa24.79■■□□□ 1.56
FAM3A-207ENST00000416319 MTX1Q13505 466 aa24.79■■□□□ 1.56
FAM3A-207ENST00000416319 BSDC1Q9NW68 430 aaPredicted RBP24.79■■□□□ 1.56
FAM3A-207ENST00000416319 CHMP3Q9Y3E7 222 aa24.79■■□□□ 1.56
FAM3A-207ENST00000416319 ARFGEF1Q9Y6D6 1849 aa24.79■■□□□ 1.56
FAM3A-207ENST00000416319 SNED1Q8TER0 1413 aa24.78■■□□□ 1.56
FAM3A-207ENST00000416319 IGHMBP2P38935 993 aaKnown RBP24.78■■□□□ 1.56
FAM3A-207ENST00000416319 MYH3P11055 1940 aa24.78■■□□□ 1.56
FAM3A-207ENST00000416319 LTBP3Q9NS15 1303 aa24.77■■□□□ 1.56
FAM3A-207ENST00000416319 ARHGAP27Q6ZUM4 889 aa24.76■■□□□ 1.55
FAM3A-207ENST00000416319 ZBTB40Q9NUA8 1239 aa24.76■■□□□ 1.55
FAM3A-207ENST00000416319 ZNF219Q9P2Y4 722 aaPredicted RBP24.76■■□□□ 1.55
FAM3A-207ENST00000416319 PSMD1Q99460 953 aa24.75■■□□□ 1.55
FAM3A-207ENST00000416319 MPHOSPH8Q99549 860 aa24.75■■□□□ 1.55
FAM3A-207ENST00000416319 NFKBIEO00221 500 aa24.74■■□□□ 1.55
FAM3A-207ENST00000416319 OLFM4Q6UX06 510 aa24.74■■□□□ 1.55
FAM3A-207ENST00000416319 SUPT16HQ9Y5B9 1047 aaKnown RBP24.74■■□□□ 1.55
FAM3A-207ENST00000416319 COL4A1P02462 1669 aa24.73■■□□□ 1.55
FAM3A-207ENST00000416319 RFX5P48382 616 aaPredicted RBP24.73■■□□□ 1.55
FAM3A-207ENST00000416319 FKBP4Q02790 459 aaKnown RBP eCLIP24.73■■□□□ 1.55
FAM3A-207ENST00000416319 TAF7LQ5H9L4 462 aa24.73■■□□□ 1.55
FAM3A-207ENST00000416319 TAOK3Q9H2K8 898 aa24.73■■□□□ 1.55
FAM3A-207ENST00000416319 RTFDC1Q9BY42 306 aaPredicted RBP24.72■■□□□ 1.55
FAM3A-207ENST00000416319 PODXL2Q9NZ53 605 aa24.72■■□□□ 1.55
FAM3A-207ENST00000416319 MINPP1Q9UNW1 487 aa24.72■■□□□ 1.55
FAM3A-207ENST00000416319 MPNDQ8N594 471 aa24.71■■□□□ 1.55
FAM3A-207ENST00000416319 FBXO3Q9UK99 471 aa24.71■■□□□ 1.55
FAM3A-207ENST00000416319 SRGAP3O43295 1099 aa24.7■■□□□ 1.54
FAM3A-207ENST00000416319 ATP8B2P98198 1209 aa24.7■■□□□ 1.54
FAM3A-207ENST00000416319 PTPN12Q05209 780 aaKnown RBP24.7■■□□□ 1.54
FAM3A-207ENST00000416319 DPP8Q6V1X1 898 aaPredicted RBP24.7■■□□□ 1.54
FAM3A-207ENST00000416319 LDHAL6AQ6ZMR3 332 aa24.7■■□□□ 1.54
FAM3A-207ENST00000416319 VPS33BQ9H267 617 aa24.7■■□□□ 1.54
FAM3A-207ENST00000416319 LRRC37AA6NMS7 1700 aa24.69■■□□□ 1.54
FAM3A-207ENST00000416319 SLC51AQ86UW1 340 aa24.69■■□□□ 1.54
FAM3A-207ENST00000416319 SUPT20HQ8NEM7 779 aa24.69■■□□□ 1.54
FAM3A-207ENST00000416319 ZNF594Q96JF6 807 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms