RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 SUSD4Q5VX71 490 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 DPY19L2Q6NUT2 758 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 RTKN2Q8IZC4 609 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 TRMT112Q9UI30 125 aaKnown RBP11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 RIC1Q4ADV7 1423 aa11.58□□□□□ -0.55
CHRNA1-206ENST00000416004 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 PI4KAP2A4QPH2 592 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 RASSF7Q02833 373 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 AAMPQ13685 434 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 PI4KAP1Q8N8J0 262 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 C1orf115Q9H7X2 142 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 FER1L6Q2WGJ9 1857 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 UBN2Q6ZU65 1347 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 SH3TC1Q8TE82 1336 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 TIAM2Q8IVF5 1701 aa11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 DICER1Q9UPY3 1922 aaKnown RBP11.58□□□□□ -0.56
CHRNA1-206ENST00000416004 KLRG2A4D1S0 409 aaPredicted RBP11.57□□□□□ -0.56
CHRNA1-206ENST00000416004 CC2D2BQ6DHV5 1058 aa11.57□□□□□ -0.56
CHRNA1-206ENST00000416004 CACNA1FO60840 1977 aa11.57□□□□□ -0.56
CHRNA1-206ENST00000416004 NTSR2O95665 410 aa11.57□□□□□ -0.56
CHRNA1-206ENST00000416004 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
CHRNA1-206ENST00000416004 MEIS3Q99687 375 aa11.57□□□□□ -0.56
CHRNA1-206ENST00000416004 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
CHRNA1-206ENST00000416004 LTBP3Q9NS15 1303 aa11.56□□□□□ -0.56
CHRNA1-206ENST00000416004 NEXNQ0ZGT2 675 aa11.56□□□□□ -0.56
CHRNA1-206ENST00000416004 NLRP10Q86W26 655 aa11.56□□□□□ -0.56
CHRNA1-206ENST00000416004 SKAP1Q86WV1 359 aa11.56□□□□□ -0.56
CHRNA1-206ENST00000416004 CRY2Q49AN0 593 aa11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 DDX46Q7L014 1031 aaKnown RBP11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 DNAAF4Q8WXU2 420 aa11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 CRAMP1Q96RY5 1269 aa11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 MAP3K2Q9Y2U5 619 aa11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 ABCC12Q96J65 1359 aa11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 BEND3Q5T5X7 828 aa11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 KSR2Q6VAB6 950 aa11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 CENPQQ7L2Z9 268 aaPredicted RBP11.55□□□□□ -0.56
CHRNA1-206ENST00000416004 NFKBIEO00221 500 aa11.54□□□□□ -0.56
CHRNA1-206ENST00000416004 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
CHRNA1-206ENST00000416004 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
CHRNA1-206ENST00000416004 HOXA10P31260 410 aaPredicted RBP11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 SIRT2Q8IXJ6 389 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 JDP2Q8WYK2 163 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 GLTPD2A6NH11 291 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 ATP5J2-PTCD1G3V325 749 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 TOMM70O94826 608 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 TMC4Q7Z404 712 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 SUPT20HQ8NEM7 779 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 MYD88Q99836 296 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 SRCIN1Q9C0H9 1055 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 USP44Q9H0E7 712 aa11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 CHMP4BQ9H444 224 aaKnown RBP11.53□□□□□ -0.56
CHRNA1-206ENST00000416004 LAMB2P55268 1798 aa11.52□□□□□ -0.56
CHRNA1-206ENST00000416004 BBOX1O75936 387 aa11.52□□□□□ -0.57
CHRNA1-206ENST00000416004 TRIM28Q13263 835 aaKnown RBP11.52□□□□□ -0.57
CHRNA1-206ENST00000416004 HDAC1Q13547 482 aaPredicted RBP11.52□□□□□ -0.57
CHRNA1-206ENST00000416004 CCDC191Q8NCU4 936 aa11.52□□□□□ -0.57
CHRNA1-206ENST00000416004 ISCA1Q9BUE6 129 aa11.52□□□□□ -0.57
CHRNA1-206ENST00000416004 CWC25Q9NXE8 425 aaPredicted RBP11.52□□□□□ -0.57
CHRNA1-206ENST00000416004 IGKV5-2P06315 115 aa11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 HCLS1P14317 486 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 VEGFAP15692 232 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 PSMD1Q99460 953 aa11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 RRAGCQ9HB90 399 aa11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 SYNE4Q8N205 404 aa11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 ZBTB38Q8NAP3 1195 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 C7orf43Q8WVR3 580 aa11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 FAM89AQ96GI7 184 aa11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 METTL22Q9BUU2 404 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 NMRK2Q9NPI5 230 aa11.51□□□□□ -0.57
CHRNA1-206ENST00000416004 IRS4O14654 1257 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-206ENST00000416004 KIF3CO14782 793 aa11.5□□□□□ -0.57
CHRNA1-206ENST00000416004 CEP85Q6P2H3 762 aa11.5□□□□□ -0.57
CHRNA1-206ENST00000416004 LINS1Q8NG48 757 aa11.5□□□□□ -0.57
CHRNA1-206ENST00000416004 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 IQCA1LA6NCM1 817 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 NBPF7P0C2Y1 421 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 EIF6P56537 245 aaKnown RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 GRAPQ13588 217 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 RTL5Q5HYW3 569 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 ANKRD44Q8N8A2 993 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 RBM46Q8TBY0 533 aaKnown RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 GRAPLQ8TC17 118 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 VPS33BQ9H267 617 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 ZNF277Q9NRM2 450 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 ATP6V0A2Q9Y487 856 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 ALDH1L1O75891 902 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 GNAI2P04899 355 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 PCCAP05165 728 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 GNAI3P08754 354 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 CCDC152Q4G0S7 254 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 DPP8Q6V1X1 898 aaPredicted RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 LARGE2Q8N3Y3 721 aa11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 LRRFIP2Q9Y608 721 aaKnown RBP11.49□□□□□ -0.57
CHRNA1-206ENST00000416004 NEURL1BA8MQ27 555 aa11.48□□□□□ -0.57
CHRNA1-206ENST00000416004 PDE8AO60658 829 aa11.48□□□□□ -0.57
CHRNA1-206ENST00000416004 UBTFL1P0CB47 393 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms