RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ATP5J2-PTCD1G3V325 749 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 NRDCO43847 1150 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 ARHGAP45Q92619 1136 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 ST7Q9NRC1 585 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 ZBTB40Q9NUA8 1239 aa9.16□□□□□ -0.94
SIK3-203ENST00000415541 LMTK3Q96Q04 1460 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 MAP2K2P36507 400 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 MYD88Q99836 296 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 USP26Q9BXU7 913 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.15□□□□□ -0.94
SIK3-203ENST00000415541 MAP3K2Q9Y2U5 619 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 CPSF1Q10570 1443 aaKnown RBP9.15□□□□□ -0.94
SIK3-203ENST00000415541 CD163L1Q9NR16 1453 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 PTPRCP08575 1304 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 EXOC5O00471 708 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 GYS2P54840 703 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 NBPF20Q3BBV1 942 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 TSHZ3Q63HK5 1081 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 MCTP2Q6DN12 878 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 CLASRPQ8N2M8 674 aaKnown RBP9.15□□□□□ -0.94
SIK3-203ENST00000415541 INTS4Q96HW7 963 aaKnown RBP9.15□□□□□ -0.94
SIK3-203ENST00000415541 FMNL2Q96PY5 1086 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 ZBTB3Q9H5J0 574 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 MED4Q9NPJ6 270 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 AXIN2Q9Y2T1 843 aa9.15□□□□□ -0.94
SIK3-203ENST00000415541 CCDC196A0A1B0GTZ2 297 aa9.15□□□□□ -0.95
SIK3-203ENST00000415541 PRR29P0C7W0 189 aa9.15□□□□□ -0.95
SIK3-203ENST00000415541 ZNF853P0CG23 659 aa9.15□□□□□ -0.95
SIK3-203ENST00000415541 PNMA6AP0CW24 399 aaPredicted RBP9.15□□□□□ -0.95
SIK3-203ENST00000415541 SETQ01105 290 aaPredicted RBP9.15□□□□□ -0.95
SIK3-203ENST00000415541 FAM200AQ8TCP9 573 aa9.15□□□□□ -0.95
SIK3-203ENST00000415541 LRRCC1Q9C099 1032 aa9.15□□□□□ -0.95
SIK3-203ENST00000415541 ELP1O95163 1332 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 TUBB4AP04350 444 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 RPAINQ86UA6 219 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 NUTM1Q86Y26 1132 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 EGFL6Q8IUX8 553 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 IGSF1Q8N6C5 1336 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 CPS1P31327 1500 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 ANKRD26Q9UPS8 1709 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 COPS6Q7L5N1 327 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 UBXN4Q92575 508 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 SUFUQ9UMX1 484 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 MYO5BQ9ULV0 1848 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 NEK4P51957 841 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 FOXD4L6Q3SYB3 417 aaPredicted RBP9.14□□□□□ -0.95
SIK3-203ENST00000415541 ZSCAN25Q6NSZ9 544 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 FOXD4L3Q6VB84 417 aaPredicted RBP9.14□□□□□ -0.95
SIK3-203ENST00000415541 FAM107BQ9H098 131 aa9.14□□□□□ -0.95
SIK3-203ENST00000415541 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
SIK3-203ENST00000415541 GADD45BO75293 160 aaPredicted RBP9.13□□□□□ -0.95
SIK3-203ENST00000415541 SSR1P43307 286 aaKnown RBP9.13□□□□□ -0.95
SIK3-203ENST00000415541 LMAN1P49257 510 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 TRDNQ13061 729 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 HSP90AB4PQ58FF6 505 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 C16orf71Q8IYS4 520 aaPredicted RBP9.13□□□□□ -0.95
SIK3-203ENST00000415541 EXOC4Q96A65 974 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 TMX3Q96JJ7 454 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 KIAA0232Q92628 1395 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 TOM1O60784 492 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 IL2RBP14784 551 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 LRCH2Q5VUJ6 765 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 SUGP1Q8IWZ8 645 aaKnown RBP9.13□□□□□ -0.95
SIK3-203ENST00000415541 XAGE3Q8WTP9 111 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 ACSBG1Q96GR2 724 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 ZNF446Q9NWS9 450 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 RAI14Q9P0K7 980 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 ARHGEF10O15013 1369 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 SWT1Q5T5J6 900 aaKnown RBP9.13□□□□□ -0.95
SIK3-203ENST00000415541 EP400NLQ6ZTU2 488 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 BRINP3Q76B58 766 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 TMEM87AQ8NBN3 555 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 CEP89Q96ST8 783 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 PSD3Q9NYI0 1048 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 REREQ9P2R6 1566 aa9.13□□□□□ -0.95
SIK3-203ENST00000415541 SNRPA1P09661 255 aaKnown RBP9.12□□□□□ -0.95
SIK3-203ENST00000415541 H2AFXP16104 143 aaPredicted RBP9.12□□□□□ -0.95
SIK3-203ENST00000415541 ACTN2P35609 894 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 CWF19L2Q2TBE0 894 aaKnown RBP9.12□□□□□ -0.95
SIK3-203ENST00000415541 LARP1Q6PKG0 1096 aaKnown RBP9.12□□□□□ -0.95
SIK3-203ENST00000415541 GDPD2Q9HCC8 539 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 HYPKQ9NX55 129 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 KIF6Q6ZMV9 814 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 MMS22LQ6ZRQ5 1243 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 PPP1R42Q7Z4L9 355 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 C8orf37Q96NL8 207 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 FHOD1Q9Y613 1164 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 CLCN6P51797 869 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 ARHGAP29Q52LW3 1261 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 GIMAP6Q6P9H5 292 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 SMARCE1Q969G3 411 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 CHAMP1Q96JM3 812 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 CLIP2Q9UDT6 1046 aa9.12□□□□□ -0.95
SIK3-203ENST00000415541 OAS2P29728 719 aaKnown RBP9.11□□□□□ -0.95
SIK3-203ENST00000415541 SART3Q15020 963 aaKnown RBP9.11□□□□□ -0.95
SIK3-203ENST00000415541 IQUBQ8NA54 791 aa9.11□□□□□ -0.95
SIK3-203ENST00000415541 MKRN1Q9UHC7 482 aaKnown RBP9.11□□□□□ -0.95
SIK3-203ENST00000415541 RIMS1Q86UR5 1692 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms