RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 EPAS1Q99814 870 aa8.24□□□□□ -1.09
HDAC8-211ENST00000415409 ATG3Q9NT62 314 aa8.24□□□□□ -1.09
HDAC8-211ENST00000415409 USP21Q9UK80 565 aa8.24□□□□□ -1.09
HDAC8-211ENST00000415409 LRRFIP2Q9Y608 721 aaKnown RBP8.24□□□□□ -1.09
HDAC8-211ENST00000415409 RGPD5Q99666 1765 aa8.24□□□□□ -1.09
HDAC8-211ENST00000415409 PRIM1P49642 420 aaKnown RBP8.23□□□□□ -1.09
HDAC8-211ENST00000415409 CAMK2BQ13554 666 aa8.23□□□□□ -1.09
HDAC8-211ENST00000415409 PLBD2Q8NHP8 589 aa8.23□□□□□ -1.09
HDAC8-211ENST00000415409 METTL22Q9BUU2 404 aaPredicted RBP8.23□□□□□ -1.09
HDAC8-211ENST00000415409 LNPKQ9C0E8 428 aa8.23□□□□□ -1.09
HDAC8-211ENST00000415409 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.23□□□□□ -1.09
HDAC8-211ENST00000415409 ASAP1Q9ULH1 1129 aa8.23□□□□□ -1.09
HDAC8-211ENST00000415409 NWD2Q9ULI1 1742 aa8.23□□□□□ -1.09
HDAC8-211ENST00000415409 IBTKQ9P2D0 1353 aaPredicted RBP8.22□□□□□ -1.09
HDAC8-211ENST00000415409 KDM3BQ7LBC6 1761 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 BRWD3Q6RI45 1802 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 A0A0G2JS52 829 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 NBPF26B4DH59 902 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 GRM8O00222 908 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 ANP32AP39687 249 aaKnown RBP8.22□□□□□ -1.09
HDAC8-211ENST00000415409 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
HDAC8-211ENST00000415409 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
HDAC8-211ENST00000415409 LRP10Q7Z4F1 713 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 NBPF15Q8N660 670 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 MARCH10Q8NA82 808 aaPredicted RBP8.22□□□□□ -1.09
HDAC8-211ENST00000415409 DDX12PQ92771 950 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 MYD88Q99836 296 aa8.22□□□□□ -1.09
HDAC8-211ENST00000415409 TRPC5Q9UL62 973 aaPredicted RBP8.22□□□□□ -1.09
HDAC8-211ENST00000415409 BCL9O00512 1426 aa8.21□□□□□ -1.09
HDAC8-211ENST00000415409 A1BGP04217 495 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 NBPF7P0C2Y1 421 aaPredicted RBP8.21□□□□□ -1.1
HDAC8-211ENST00000415409 PIP4K2AP48426 406 aaPredicted RBP8.21□□□□□ -1.1
HDAC8-211ENST00000415409 CWF19L2Q2TBE0 894 aaKnown RBP8.21□□□□□ -1.1
HDAC8-211ENST00000415409 C8orf34Q49A92 452 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 HSP90AB4PQ58FF6 505 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 C6orf132Q5T0Z8 1188 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 KIF6Q6ZMV9 814 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 PPP1R42Q7Z4L9 355 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 NPM2Q86SE8 214 aaKnown RBP8.21□□□□□ -1.1
HDAC8-211ENST00000415409 CCDC125Q86Z20 511 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 DNAJC10Q8IXB1 793 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 SPRYD3Q8NCJ5 442 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 SSH3Q8TE77 659 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 SMARCC1Q92922 1105 aaPredicted RBP8.21□□□□□ -1.1
HDAC8-211ENST00000415409 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
HDAC8-211ENST00000415409 ATRNO75882 1429 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 BCL9LQ86UU0 1499 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 NEURL1BA8MQ27 555 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 APBB1O00213 710 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 SRGAP3O43295 1099 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 RAB11FIP3O75154 756 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 IGKV5-2P06315 115 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 GCKRQ14397 625 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 ACSBG1Q96GR2 724 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 LRRCC1Q9C099 1032 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 UTYO14607 1347 aa8.2□□□□□ -1.1
HDAC8-211ENST00000415409 KCPQ6ZWJ8 1503 aa8.19□□□□□ -1.1
HDAC8-211ENST00000415409 PNMA6EA0A0J9YXQ4 647 aa8.19□□□□□ -1.1
HDAC8-211ENST00000415409 CYP19A1P11511 503 aaPredicted RBP8.19□□□□□ -1.1
HDAC8-211ENST00000415409 BCAMP50895 628 aa8.19□□□□□ -1.1
HDAC8-211ENST00000415409 MTX1Q13505 466 aa8.19□□□□□ -1.1
HDAC8-211ENST00000415409 NBR1Q14596 966 aa8.19□□□□□ -1.1
HDAC8-211ENST00000415409 BMP2KLQ5H9B9 411 aa8.19□□□□□ -1.1
HDAC8-211ENST00000415409 TTLL7Q6ZT98 887 aa8.19□□□□□ -1.1
HDAC8-211ENST00000415409 LAPTM4BQ86VI4 370 aa8.19□□□□□ -1.1
HDAC8-211ENST00000415409 UPF2Q9HAU5 1272 aaKnown RBP8.19□□□□□ -1.1
HDAC8-211ENST00000415409 SEPT9Q9UHD8 586 aaPredicted RBP8.19□□□□□ -1.1
HDAC8-211ENST00000415409 EXOC6BQ9Y2D4 811 aa8.19□□□□□ -1.1
HDAC8-211ENST00000415409 ZNF330Q9Y3S2 320 aaPredicted RBP8.19□□□□□ -1.1
HDAC8-211ENST00000415409 SCN11AQ9UI33 1791 aa8.18□□□□□ -1.1
HDAC8-211ENST00000415409 SURF6O75683 361 aaKnown RBP8.18□□□□□ -1.1
HDAC8-211ENST00000415409 OS9Q13438 667 aaPredicted RBP8.18□□□□□ -1.1
HDAC8-211ENST00000415409 ERC1Q8IUD2 1116 aa8.18□□□□□ -1.1
HDAC8-211ENST00000415409 SUCLG2Q96I99 432 aa8.18□□□□□ -1.1
HDAC8-211ENST00000415409 GJD4Q96KN9 370 aaPredicted RBP8.18□□□□□ -1.1
HDAC8-211ENST00000415409 ZBTB3Q9H5J0 574 aa8.18□□□□□ -1.1
HDAC8-211ENST00000415409 CWC25Q9NXE8 425 aaPredicted RBP8.18□□□□□ -1.1
HDAC8-211ENST00000415409 SIPA1L3O60292 1781 aaPredicted RBP8.17□□□□□ -1.1
HDAC8-211ENST00000415409 A0A087WZG4 1122 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 LOC102724428A0A0B4J2F2 783 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 ATP5J2-PTCD1G3V325 749 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 MAP3K7O43318 606 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 SMARCA5O60264 1052 aaPredicted RBP8.17□□□□□ -1.1
HDAC8-211ENST00000415409 ATP6V1AP38606 617 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 IL6STP40189 918 aaPredicted RBP8.17□□□□□ -1.1
HDAC8-211ENST00000415409 SIK1P57059 783 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 TCIRG1Q13488 830 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 HSP90AB3PQ58FF7 597 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 PLEKHM2Q8IWE5 1019 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 CCDC191Q8NCU4 936 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 KIF1BPQ96EK5 621 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 ZFRQ96KR1 1074 aaKnown RBP8.17□□□□□ -1.1
HDAC8-211ENST00000415409 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 BCL11AQ9H165 835 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 BICC1Q9H694 974 aaKnown RBP8.17□□□□□ -1.1
HDAC8-211ENST00000415409 PLCH1Q4KWH8 1693 aa8.17□□□□□ -1.1
HDAC8-211ENST00000415409 SOWAHBA6NEL2 793 aa8.16□□□□□ -1.1
HDAC8-211ENST00000415409 TRIM6-TRIM34B2RNG4 842 aa8.16□□□□□ -1.1
HDAC8-211ENST00000415409 H7C1W4 665 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms