RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 SKIDA1Q1XH10 827 aa9.79□□□□□ -0.84
CTNND1-206ENST00000415361 ARHGAP29Q52LW3 1261 aa9.79□□□□□ -0.84
CTNND1-206ENST00000415361 UTP14AQ9BVJ6 771 aaKnown RBP9.79□□□□□ -0.84
CTNND1-206ENST00000415361 BACH2Q9BYV9 841 aa9.79□□□□□ -0.84
CTNND1-206ENST00000415361 RANBP6O60518 1105 aaKnown RBP9.78□□□□□ -0.84
CTNND1-206ENST00000415361 TPTE2Q6XPS3 522 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 GOLGA8AA7E2F4 631 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 GOLGA8BA8MQT2 603 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 SSR1P43307 286 aaKnown RBP9.78□□□□□ -0.84
CTNND1-206ENST00000415361 PRPF40BQ6NWY9 871 aaKnown RBP9.78□□□□□ -0.84
CTNND1-206ENST00000415361 FAM114A1Q8IWE2 563 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 TMEM87AQ8NBN3 555 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 CALML4Q96GE6 196 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 SNRKQ9NRH2 765 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 HDAC9Q9UKV0 1011 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 BAG6P46379 1132 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 NLRP5P59047 1200 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 HMG20BQ9P0W2 317 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 POLR3AO14802 1390 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-206ENST00000415361 ROBO2Q9HCK4 1378 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 ANAPC15P60006 121 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 CCDC83Q8IWF9 413 aa9.78□□□□□ -0.84
CTNND1-206ENST00000415361 KANK3Q6NY19 840 aa9.77□□□□□ -0.84
CTNND1-206ENST00000415361 IFIT3O14879 490 aaKnown RBP9.77□□□□□ -0.85
CTNND1-206ENST00000415361 CACNA2D4Q7Z3S7 1137 aa9.77□□□□□ -0.85
CTNND1-206ENST00000415361 CRNKL1Q9BZJ0 848 aaKnown RBP9.77□□□□□ -0.85
CTNND1-206ENST00000415361 PIBF1Q8WXW3 757 aa9.77□□□□□ -0.85
CTNND1-206ENST00000415361 FEZ1Q99689 392 aa9.77□□□□□ -0.85
CTNND1-206ENST00000415361 LGR6Q9HBX8 967 aa9.77□□□□□ -0.85
CTNND1-206ENST00000415361 TRPC5Q9UL62 973 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-206ENST00000415361 IQSEC3Q9UPP2 1182 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-206ENST00000415361 CFAP100Q494V2 611 aa9.77□□□□□ -0.85
CTNND1-206ENST00000415361 NYXQ9GZU5 481 aa9.77□□□□□ -0.85
CTNND1-206ENST00000415361 KAT14Q9H8E8 782 aa9.77□□□□□ -0.85
CTNND1-206ENST00000415361 KSR2Q6VAB6 950 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 USO1O60763 962 aaKnown RBP9.76□□□□□ -0.85
CTNND1-206ENST00000415361 IL13P35225 146 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 MAP9Q49MG5 647 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 FERMT2Q96AC1 680 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 FERMT1Q9BQL6 677 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 B4DLN1 442 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 MRPL12P52815 198 aaKnown RBP9.76□□□□□ -0.85
CTNND1-206ENST00000415361 ABCC3O15438 1527 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 PARD3Q8TEW0 1356 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 GCC2Q8IWJ2 1684 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 CCDC183Q5T5S1 534 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 LMBR1LQ6UX01 489 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 DDX11Q96FC9 970 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 F8W031 263 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-206ENST00000415361 ZFYP08048 801 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-206ENST00000415361 ZNF790Q6PG37 636 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 GRPEL1Q9HAV7 217 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 ECHDC1Q9NTX5 307 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 LIMCH1Q9UPQ0 1083 aa9.76□□□□□ -0.85
CTNND1-206ENST00000415361 BMP15O95972 392 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 FAM182BQ5T319 152 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 TSPYL6Q8N831 410 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 ERMNQ8TAM6 284 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 KIAA0232Q92628 1395 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 RXRBP28702 533 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 SLC4A8Q2Y0W8 1093 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 USP37Q86T82 979 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 TAX1BP1Q86VP1 789 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 DRC1Q96MC2 740 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 PRDM15P57071 1507 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-206ENST00000415361 GRM8O00222 908 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 KIF5CO60282 957 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 YEATS4O95619 227 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 PDCL2Q8N4E4 241 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 CLEC11AQ9Y240 323 aa9.75□□□□□ -0.85
CTNND1-206ENST00000415361 NEMFO60524 1076 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 CCDC172P0C7W6 258 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 CWF19L2Q2TBE0 894 aaKnown RBP9.74□□□□□ -0.85
CTNND1-206ENST00000415361 TMTC2Q8N394 836 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 KRT23Q9C075 422 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 NSFL1CQ9UNZ2 370 aaKnown RBP9.74□□□□□ -0.85
CTNND1-206ENST00000415361 GOLIM4O00461 696 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 IRS4O14654 1257 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-206ENST00000415361 SFPQP23246 707 aaKnown RBP eCLIP9.74□□□□□ -0.851e-8■■■□□ 15.1
CTNND1-206ENST00000415361 WDR78Q5VTH9 848 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 MFSD6Q6ZSS7 791 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 MEIS3Q99687 375 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 TAOK3Q9H2K8 898 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 INCENPQ9NQS7 918 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-206ENST00000415361 NCOA7Q8NI08 942 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 DDX12PQ92771 950 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 CCDC97Q96F63 343 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-206ENST00000415361 DDX19AQ9NUU7 478 aaKnown RBP9.74□□□□□ -0.85
CTNND1-206ENST00000415361 CDC42BPAQ5VT25 1732 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 LRRC45Q96CN5 670 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 CNNM2Q9H8M5 875 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 GCOM1H8Y6P7 765 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-206ENST00000415361 STAMBPO95630 424 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 MYZAPP0CAP1 466 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 GRM1Q13255 1194 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 DNAJC10Q8IXB1 793 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 CNBD1Q8NA66 436 aa9.74□□□□□ -0.85
CTNND1-206ENST00000415361 UBA5Q9GZZ9 404 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms