RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 TRIM28Q13263 835 aaKnown RBP25.17■■□□□ 1.62
SLC13A3-204ENST00000413164 TCIRG1Q13488 830 aa25.17■■□□□ 1.62
SLC13A3-204ENST00000413164 BRD1O95696 1058 aa25.15■■□□□ 1.62
SLC13A3-204ENST00000413164 KLHL40Q2TBA0 621 aa25.15■■□□□ 1.62
SLC13A3-204ENST00000413164 DBNDD2Q9BQY9 259 aa25.15■■□□□ 1.62
SLC13A3-204ENST00000413164 RFX7Q2KHR2 1363 aa25.15■■□□□ 1.62
SLC13A3-204ENST00000413164 AK2P54819 239 aa25.15■■□□□ 1.62
SLC13A3-204ENST00000413164 PRPF40BQ6NWY9 871 aaKnown RBP25.15■■□□□ 1.62
SLC13A3-204ENST00000413164 GPR108Q9NPR9 543 aa25.15■■□□□ 1.62
SLC13A3-204ENST00000413164 MCTP1Q6DN14 999 aa25.14■■□□□ 1.62
SLC13A3-204ENST00000413164 ZSWIM6Q9HCJ5 1215 aa25.14■■□□□ 1.62
SLC13A3-204ENST00000413164 ISY1Q9ULR0 285 aaKnown RBP25.14■■□□□ 1.62
SLC13A3-204ENST00000413164 RBM8AQ9Y5S9 174 aaKnown RBP25.14■■□□□ 1.62
SLC13A3-204ENST00000413164 KAT6BQ8WYB5 2073 aa25.14■■□□□ 1.61
SLC13A3-204ENST00000413164 ADCK5Q3MIX3 580 aa25.13■■□□□ 1.61
SLC13A3-204ENST00000413164 RUFY3Q7L099 469 aa25.13■■□□□ 1.61
SLC13A3-204ENST00000413164 EDC3Q96F86 508 aaKnown RBP25.13■■□□□ 1.61
SLC13A3-204ENST00000413164 LMBRD1Q9NUN5 540 aa25.13■■□□□ 1.61
SLC13A3-204ENST00000413164 CHMP3Q9Y3E7 222 aa25.13■■□□□ 1.61
SLC13A3-204ENST00000413164 STARD3NLO95772 234 aa25.13■■□□□ 1.61
SLC13A3-204ENST00000413164 CASTP20810 708 aaKnown RBP25.13■■□□□ 1.61
SLC13A3-204ENST00000413164 ZNF772Q68DY9 489 aaPredicted RBP25.13■■□□□ 1.61
SLC13A3-204ENST00000413164 HAUS7Q99871 368 aa25.13■■□□□ 1.61
SLC13A3-204ENST00000413164 IL15P40933 162 aaPredicted RBP25.12■■□□□ 1.61
SLC13A3-204ENST00000413164 LIMCH1Q9UPQ0 1083 aa25.12■■□□□ 1.61
SLC13A3-204ENST00000413164 VPS53Q5VIR6 699 aa25.12■■□□□ 1.61
SLC13A3-204ENST00000413164 CREB3L3Q68CJ9 461 aa25.12■■□□□ 1.61
SLC13A3-204ENST00000413164 CIAO1O76071 339 aa25.11■■□□□ 1.61
SLC13A3-204ENST00000413164 XRCC6P12956 609 aaKnown RBP eCLIP25.11■■□□□ 1.61
SLC13A3-204ENST00000413164 RPAP1Q9BWH6 1393 aaPredicted RBP25.11■■□□□ 1.61
SLC13A3-204ENST00000413164 EYA2O00167 538 aa25.1■■□□□ 1.61
SLC13A3-204ENST00000413164 MARCH10Q8NA82 808 aaPredicted RBP25.1■■□□□ 1.61
SLC13A3-204ENST00000413164 JAKMIP1Q96N16 626 aaKnown RBP25.1■■□□□ 1.61
SLC13A3-204ENST00000413164 SLC4A9Q96Q91 983 aa25.1■■□□□ 1.61
SLC13A3-204ENST00000413164 CPA1P15085 419 aa25.1■■□□□ 1.61
SLC13A3-204ENST00000413164 ZKSCAN1P17029 563 aaPredicted RBP25.1■■□□□ 1.61
SLC13A3-204ENST00000413164 KIF6Q6ZMV9 814 aa25.1■■□□□ 1.61
SLC13A3-204ENST00000413164 ZNF589Q86UQ0 364 aaPredicted RBP25.1■■□□□ 1.61
SLC13A3-204ENST00000413164 DDX49Q9Y6V7 483 aaKnown RBP25.1■■□□□ 1.61
SLC13A3-204ENST00000413164 PLA2G12BQ9BX93 195 aa25.09■■□□□ 1.61
SLC13A3-204ENST00000413164 SLC27A2O14975 620 aa25.08■■□□□ 1.61
SLC13A3-204ENST00000413164 PCCAP05165 728 aaPredicted RBP25.08■■□□□ 1.61
SLC13A3-204ENST00000413164 MAP3K15Q6ZN16 1313 aa25.08■■□□□ 1.61
SLC13A3-204ENST00000413164 ZNF609O15014 1411 aa25.08■■□□□ 1.61
SLC13A3-204ENST00000413164 CYP19A1P11511 503 aaPredicted RBP25.08■■□□□ 1.61
SLC13A3-204ENST00000413164 LRRC24Q50LG9 513 aa25.08■■□□□ 1.61
SLC13A3-204ENST00000413164 CYP46A1Q9Y6A2 500 aa25.08■■□□□ 1.61
SLC13A3-204ENST00000413164 TAF5LO75529 589 aa25.07■■□□□ 1.6
SLC13A3-204ENST00000413164 GIGYF2Q6Y7W6 1299 aaKnown RBP25.07■■□□□ 1.6
SLC13A3-204ENST00000413164 ZNF594Q96JF6 807 aaPredicted RBP25.07■■□□□ 1.6
SLC13A3-204ENST00000413164 PDRG1Q9NUG6 133 aa25.07■■□□□ 1.6
SLC13A3-204ENST00000413164 ZNF330Q9Y3S2 320 aaPredicted RBP25.07■■□□□ 1.6
SLC13A3-204ENST00000413164 NDUFB9Q9Y6M9 179 aa25.07■■□□□ 1.6
SLC13A3-204ENST00000413164 MRE11P49959 708 aa25.07■■□□□ 1.6
SLC13A3-204ENST00000413164 USPL1Q5W0Q7 1092 aa25.07■■□□□ 1.6
SLC13A3-204ENST00000413164 SYTL4Q96C24 671 aaPredicted RBP25.07■■□□□ 1.6
SLC13A3-204ENST00000413164 TSGA10IPQ3SY00 556 aa25.06■■□□□ 1.6
SLC13A3-204ENST00000413164 SEPT12Q8IYM1 358 aa25.06■■□□□ 1.6
SLC13A3-204ENST00000413164 ZBTB38Q8NAP3 1195 aaPredicted RBP25.06■■□□□ 1.6
SLC13A3-204ENST00000413164 FBXO3Q9UK99 471 aa25.06■■□□□ 1.6
SLC13A3-204ENST00000413164 THSD7AQ9UPZ6 1657 aa25.06■■□□□ 1.6
SLC13A3-204ENST00000413164 ONECUT3O60422 494 aaPredicted RBP25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 KCNJ4P48050 445 aa25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 TICAM2Q86XR7 235 aa25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 KBTBD3Q8NAB2 608 aa25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 DNAJC2Q99543 621 aaKnown RBP25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 CSF1RP07333 972 aa25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 TIMM10P62072 90 aa25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 RNF20Q5VTR2 975 aa25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 GAS2L3Q86XJ1 694 aa25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 PALLDQ8WX93 1383 aa25.05■■□□□ 1.6
SLC13A3-204ENST00000413164 CHAMP1Q96JM3 812 aa25.04■■□□□ 1.6
SLC13A3-204ENST00000413164 PUS3Q9BZE2 481 aaKnown RBP25.04■■□□□ 1.6
SLC13A3-204ENST00000413164 HMG20BQ9P0W2 317 aa25.04■■□□□ 1.6
SLC13A3-204ENST00000413164 ANKRD36CQ5JPF3 1778 aa25.04■■□□□ 1.6
SLC13A3-204ENST00000413164 DOT1LQ8TEK3 1739 aa25.04■■□□□ 1.6
SLC13A3-204ENST00000413164 PRPF40AO75400 957 aaKnown RBP25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 LARGE1O95461 756 aa25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 PSMA5P28066 241 aa25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 FAM89AQ96GI7 184 aa25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 ZSCAN31Q96LW9 406 aaPredicted RBP25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 NEUROD6Q96NK8 337 aa25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 LARP6Q9BRS8 491 aaKnown RBP25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 CDHR2Q9BYE9 1310 aa25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 HLFQ16534 295 aa25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 CCDC57Q2TAC2 916 aa25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 ACSBG1Q96GR2 724 aa25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 GRPEL1Q9HAV7 217 aa25.03■■□□□ 1.6
SLC13A3-204ENST00000413164 WDR33Q9C0J8 1336 aaKnown RBP25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 PRIM1P49642 420 aaKnown RBP25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 RBM6P78332 1123 aaKnown RBP25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 FOXD4L5Q5VV16 416 aaPredicted RBP25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 DDX46Q7L014 1031 aaKnown RBP25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 FOXD4L4Q8WXT5 416 aaPredicted RBP25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 SH2B1Q9NRF2 756 aaPredicted RBP25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 SPEF2Q9C093 1822 aa25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 A0A1B0GUL7 405 aa25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 ALDH8A1Q9H2A2 487 aaPredicted RBP25.02■■□□□ 1.6
SLC13A3-204ENST00000413164 TAF6LQ9Y6J9 622 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms