RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 FBXW7Q969H0 707 aa11.89□□□□□ -0.51
SMPD4-203ENST00000412570 ISCA1Q9BUE6 129 aa11.89□□□□□ -0.51
SMPD4-203ENST00000412570 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-203ENST00000412570 AAMPQ13685 434 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 FSD1Q9BTV5 496 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 ZNF652Q9Y2D9 606 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 ANKRD18BA2A2Z9 1011 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 GOLIM4O00461 696 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 KCNJ4P48050 445 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 PKD1L3Q7Z443 1732 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 CHMP4CQ96CF2 233 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 ITGB4P16144 1822 aa11.88□□□□□ -0.51
SMPD4-203ENST00000412570 COL22A1Q8NFW1 1626 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-203ENST00000412570 CTSWP56202 376 aa11.87□□□□□ -0.51
SMPD4-203ENST00000412570 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
SMPD4-203ENST00000412570 MRC1P22897 1456 aa11.87□□□□□ -0.51
SMPD4-203ENST00000412570 IBTKQ9P2D0 1353 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-203ENST00000412570 NFIXQ14938 502 aa11.87□□□□□ -0.51
SMPD4-203ENST00000412570 IL25Q9H293 177 aa11.87□□□□□ -0.51
SMPD4-203ENST00000412570 DBNLQ9UJU6 430 aaKnown RBP11.87□□□□□ -0.51
SMPD4-203ENST00000412570 A0A1B0GUL7 405 aa11.87□□□□□ -0.51
SMPD4-203ENST00000412570 RPS6KA4O75676 772 aa11.87□□□□□ -0.51
SMPD4-203ENST00000412570 POLA2Q14181 598 aa11.87□□□□□ -0.51
SMPD4-203ENST00000412570 CCDC129Q6ZRS4 1044 aa11.87□□□□□ -0.51
SMPD4-203ENST00000412570 CELF1Q92879 486 aaKnown RBP11.87□□□□□ -0.51
SMPD4-203ENST00000412570 SEC62Q99442 399 aaKnown RBP11.86□□□□□ -0.51
SMPD4-203ENST00000412570 ANTXR1Q9H6X2 564 aa11.86□□□□□ -0.51
SMPD4-203ENST00000412570 ANO8Q9HCE9 1232 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-203ENST00000412570 SHANK3Q9BYB0 1731 aa11.86□□□□□ -0.51
SMPD4-203ENST00000412570 ZBTB7AO95365 584 aa11.86□□□□□ -0.51
SMPD4-203ENST00000412570 C22orf23Q9BZE7 217 aa11.86□□□□□ -0.51
SMPD4-203ENST00000412570 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-203ENST00000412570 ATRNO75882 1429 aa11.86□□□□□ -0.51
SMPD4-203ENST00000412570 PCCAP05165 728 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-203ENST00000412570 CASP7P55210 303 aa11.86□□□□□ -0.51
SMPD4-203ENST00000412570 CHAF1AQ13111 956 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-203ENST00000412570 TNNI3KQ59H18 835 aa11.86□□□□□ -0.51
SMPD4-203ENST00000412570 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
SMPD4-203ENST00000412570 CNBD1Q8NA66 436 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMPD4-203ENST00000412570 FAM227BQ96M60 508 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 DIAPH3Q9NSV4 1193 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 EYA2O00167 538 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 CDC45O75419 566 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 COL23A1Q86Y22 540 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-203ENST00000412570 ABCF2Q9UG63 623 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 HDAC5Q9UQL6 1122 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 ERBB4Q15303 1308 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 PDE8AO60658 829 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 VPS37DQ86XT2 251 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 ZNF34Q8IZ26 560 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 ECHDC1Q9NTX5 307 aa11.85□□□□□ -0.51
SMPD4-203ENST00000412570 NRAPQ86VF7 1730 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 PPFIA3O75145 1194 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 IDH1O75874 414 aaKnown RBP11.84□□□□□ -0.51
SMPD4-203ENST00000412570 WASHC4Q2M389 1173 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 HSP90AB4PQ58FF6 505 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 TCEANC2Q96MN5 208 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 ANKIB1Q9P2G1 1089 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 HSP90AA1P07900 732 aaKnown RBP11.84□□□□□ -0.51
SMPD4-203ENST00000412570 CPA1P15085 419 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 IGHMBP2P38935 993 aaKnown RBP11.84□□□□□ -0.51
SMPD4-203ENST00000412570 RFX5P48382 616 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-203ENST00000412570 SCARF1Q14162 830 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 TPTE2Q6XPS3 522 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 MYH14Q7Z406 1995 aaKnown RBP11.84□□□□□ -0.51
SMPD4-203ENST00000412570 NLRP3Q96P20 1036 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 UPF3BQ9BZI7 483 aaKnown RBP11.84□□□□□ -0.51
SMPD4-203ENST00000412570 MMP10P09238 476 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 GYG1P46976 350 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 FOXD4L5Q5VV16 416 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-203ENST00000412570 FOXD4L4Q8WXT5 416 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-203ENST00000412570 NARFQ9UHQ1 456 aa11.84□□□□□ -0.51
SMPD4-203ENST00000412570 NSFL1CQ9UNZ2 370 aaKnown RBP11.84□□□□□ -0.51
SMPD4-203ENST00000412570 RIMBP2O15034 1052 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 CASC1Q6TDU7 716 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 ATG9AQ7Z3C6 839 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 GPATCH3Q96I76 525 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 ONECUT3O60422 494 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-203ENST00000412570 SERPINB2P05120 415 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 IFIT1P09914 478 aaKnown RBP11.83□□□□□ -0.52
SMPD4-203ENST00000412570 KLRK1P26718 216 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 BCAMP50895 628 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 ATP2B3Q16720 1220 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 BMP2KLQ5H9B9 411 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 ANP32EQ9BTT0 268 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 ABCC6O95255 1503 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 RAB11FIP3O75154 756 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 NTSR2O95665 410 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 XAGE2Q96GT9 111 aa11.83□□□□□ -0.52
SMPD4-203ENST00000412570 NAP1L2Q9ULW6 460 aaPredicted RBP11.83□□□□□ -0.52
SMPD4-203ENST00000412570 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
SMPD4-203ENST00000412570 GYS1P13807 737 aa11.82□□□□□ -0.52
SMPD4-203ENST00000412570 CCDC152Q4G0S7 254 aa11.82□□□□□ -0.52
SMPD4-203ENST00000412570 PHKA1P46020 1223 aa11.81□□□□□ -0.52
SMPD4-203ENST00000412570 ERC1Q8IUD2 1116 aa11.81□□□□□ -0.52
SMPD4-203ENST00000412570 SIPA1L3O60292 1781 aaPredicted RBP11.81□□□□□ -0.52
SMPD4-203ENST00000412570 KDM4AO75164 1064 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms