RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 C9orf78Q9NZ63 289 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-206ENST00000412056 GRIN3BO60391 1043 aa17.63■□□□□ 0.41
CPNE1-206ENST00000412056 ALDH1B1P30837 517 aa17.63■□□□□ 0.41
CPNE1-206ENST00000412056 CCT4P50991 539 aaKnown RBP17.63■□□□□ 0.41
CPNE1-206ENST00000412056 CTSWP56202 376 aa17.63■□□□□ 0.41
CPNE1-206ENST00000412056 CCDC85AQ96PX6 553 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-206ENST00000412056 PLA2G12BQ9BX93 195 aa17.63■□□□□ 0.41
CPNE1-206ENST00000412056 LRRC37AA6NMS7 1700 aa17.63■□□□□ 0.41
CPNE1-206ENST00000412056 C21orf2O43822 256 aa17.62■□□□□ 0.41
CPNE1-206ENST00000412056 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
CPNE1-206ENST00000412056 SLC51AQ86UW1 340 aa17.62■□□□□ 0.41
CPNE1-206ENST00000412056 UTYO14607 1347 aa17.62■□□□□ 0.41
CPNE1-206ENST00000412056 NBPF7P0C2Y1 421 aaPredicted RBP17.61■□□□□ 0.41
CPNE1-206ENST00000412056 OLFM4Q6UX06 510 aa17.61■□□□□ 0.41
CPNE1-206ENST00000412056 C7orf43Q8WVR3 580 aa17.61■□□□□ 0.41
CPNE1-206ENST00000412056 SUCLG2Q96I99 432 aa17.61■□□□□ 0.41
CPNE1-206ENST00000412056 USP44Q9H0E7 712 aa17.61■□□□□ 0.41
CPNE1-206ENST00000412056 PPEF1O14829 653 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-206ENST00000412056 GRAPQ13588 217 aa17.6■□□□□ 0.41
CPNE1-206ENST00000412056 CCDC152Q4G0S7 254 aa17.6■□□□□ 0.41
CPNE1-206ENST00000412056 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
CPNE1-206ENST00000412056 INTS3Q68E01 1043 aaKnown RBP17.6■□□□□ 0.41
CPNE1-206ENST00000412056 ARHGAP27Q6ZUM4 889 aa17.6■□□□□ 0.41
CPNE1-206ENST00000412056 TTLL11Q8NHH1 800 aa17.6■□□□□ 0.41
CPNE1-206ENST00000412056 GRAPLQ8TC17 118 aaPredicted RBP17.6■□□□□ 0.41
CPNE1-206ENST00000412056 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
CPNE1-206ENST00000412056 DICER1Q9UPY3 1922 aaKnown RBP17.6■□□□□ 0.41
CPNE1-206ENST00000412056 RLBP1P12271 317 aa17.59■□□□□ 0.41
CPNE1-206ENST00000412056 FOXO4P98177 505 aa17.59■□□□□ 0.41
CPNE1-206ENST00000412056 RASSF7Q02833 373 aa17.59■□□□□ 0.41
CPNE1-206ENST00000412056 CELF1Q92879 486 aaKnown RBP17.59■□□□□ 0.41
CPNE1-206ENST00000412056 GREM2Q9H772 168 aa17.59■□□□□ 0.41
CPNE1-206ENST00000412056 SNED1Q8TER0 1413 aa17.58■□□□□ 0.41
CPNE1-206ENST00000412056 RTL9Q8NET4 1388 aa17.58■□□□□ 0.4
CPNE1-206ENST00000412056 FAM161AQ3B820 660 aa17.58■□□□□ 0.4
CPNE1-206ENST00000412056 DZIP1LQ8IYY4 767 aaKnown RBP17.58■□□□□ 0.4
CPNE1-206ENST00000412056 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.4
CPNE1-206ENST00000412056 KAZALD1Q96I82 304 aa17.58■□□□□ 0.4
CPNE1-206ENST00000412056 A0A1B0GUL6 1792 aa17.58■□□□□ 0.4
CPNE1-206ENST00000412056 PLIN1O60240 522 aa17.57■□□□□ 0.4
CPNE1-206ENST00000412056 CSF1RP07333 972 aa17.57■□□□□ 0.4
CPNE1-206ENST00000412056 CCDC93Q567U6 631 aa17.57■□□□□ 0.4
CPNE1-206ENST00000412056 FTSJ3Q8IY81 847 aaKnown RBP17.57■□□□□ 0.4
CPNE1-206ENST00000412056 MEIS3Q99687 375 aa17.57■□□□□ 0.4
CPNE1-206ENST00000412056 LTBP1Q14766 1721 aa17.57■□□□□ 0.4
CPNE1-206ENST00000412056 TIAM2Q8IVF5 1701 aa17.57■□□□□ 0.4
CPNE1-206ENST00000412056 NFKBIEO00221 500 aa17.56■□□□□ 0.4
CPNE1-206ENST00000412056 BBOX1O75936 387 aa17.56■□□□□ 0.4
CPNE1-206ENST00000412056 SOGA3Q5TF21 947 aa17.56■□□□□ 0.4
CPNE1-206ENST00000412056 LMBR1LQ6UX01 489 aa17.56■□□□□ 0.4
CPNE1-206ENST00000412056 BICC1Q9H694 974 aaKnown RBP17.56■□□□□ 0.4
CPNE1-206ENST00000412056 CHMP3Q9Y3E7 222 aa17.56■□□□□ 0.4
CPNE1-206ENST00000412056 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-206ENST00000412056 ITGA6P23229 1130 aa17.55■□□□□ 0.4
CPNE1-206ENST00000412056 RPS8P62241 208 aaKnown RBP17.55■□□□□ 0.4
CPNE1-206ENST00000412056 ANKRD44Q8N8A2 993 aa17.55■□□□□ 0.4
CPNE1-206ENST00000412056 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
CPNE1-206ENST00000412056 ATP6V0A2Q9Y487 856 aa17.55■□□□□ 0.4
CPNE1-206ENST00000412056 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
CPNE1-206ENST00000412056 ANKRD18AQ8IVF6 992 aa17.54■□□□□ 0.4
CPNE1-206ENST00000412056 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
CPNE1-206ENST00000412056 CDC5LQ99459 802 aaKnown RBP17.54■□□□□ 0.4
CPNE1-206ENST00000412056 LTBP3Q9NS15 1303 aa17.53■□□□□ 0.4
CPNE1-206ENST00000412056 PRELPP51888 382 aa17.53■□□□□ 0.4
CPNE1-206ENST00000412056 RABL6Q3YEC7 729 aaPredicted RBP17.53■□□□□ 0.4
CPNE1-206ENST00000412056 CC2D2BQ6DHV5 1058 aa17.53■□□□□ 0.4
CPNE1-206ENST00000412056 SP8Q8IXZ3 490 aa17.53■□□□□ 0.4
CPNE1-206ENST00000412056 TAOK3Q9H2K8 898 aa17.53■□□□□ 0.4
CPNE1-206ENST00000412056 TMC4Q7Z404 712 aa17.52■□□□□ 0.4
CPNE1-206ENST00000412056 RTKN2Q8IZC4 609 aa17.52■□□□□ 0.4
CPNE1-206ENST00000412056 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.4
CPNE1-206ENST00000412056 ANKRD18BA2A2Z9 1011 aa17.51■□□□□ 0.39
CPNE1-206ENST00000412056 GNAI3P08754 354 aa17.51■□□□□ 0.39
CPNE1-206ENST00000412056 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
CPNE1-206ENST00000412056 IFIT5Q13325 482 aaKnown RBP17.51■□□□□ 0.39
CPNE1-206ENST00000412056 MS4A1P11836 297 aa17.5■□□□□ 0.39
CPNE1-206ENST00000412056 IGHMBP2P38935 993 aaKnown RBP17.5■□□□□ 0.39
CPNE1-206ENST00000412056 C20orf194Q5TEA3 1177 aa17.5■□□□□ 0.39
CPNE1-206ENST00000412056 C9orf131Q5VYM1 1079 aa17.5■□□□□ 0.39
CPNE1-206ENST00000412056 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-206ENST00000412056 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
CPNE1-206ENST00000412056 CCDC57Q2TAC2 916 aa17.49■□□□□ 0.39
CPNE1-206ENST00000412056 MPNDQ8N594 471 aa17.49■□□□□ 0.39
CPNE1-206ENST00000412056 ZNF594Q96JF6 807 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-206ENST00000412056 PSMD1Q99460 953 aa17.49■□□□□ 0.39
CPNE1-206ENST00000412056 ZNF277Q9NRM2 450 aaPredicted RBP17.49■□□□□ 0.39
CPNE1-206ENST00000412056 RNF181Q9P0P0 153 aa17.49■□□□□ 0.39
CPNE1-206ENST00000412056 COG6Q9Y2V7 657 aa17.49■□□□□ 0.39
CPNE1-206ENST00000412056 COL4A5P29400 1685 aa17.48■□□□□ 0.39
CPNE1-206ENST00000412056 LMNB1P20700 586 aa17.48■□□□□ 0.39
CPNE1-206ENST00000412056 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
CPNE1-206ENST00000412056 GPSM2P81274 684 aa17.48■□□□□ 0.39
CPNE1-206ENST00000412056 MVPQ14764 893 aaKnown RBP17.48■□□□□ 0.39
CPNE1-206ENST00000412056 GRIPAP1Q4V328 841 aa17.48■□□□□ 0.39
CPNE1-206ENST00000412056 DPP8Q6V1X1 898 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-206ENST00000412056 BSDC1Q9NW68 430 aaPredicted RBP17.48■□□□□ 0.39
CPNE1-206ENST00000412056 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
CPNE1-206ENST00000412056 ZBTB7BO15156 539 aaPredicted RBP17.47■□□□□ 0.39
CPNE1-206ENST00000412056 TAF7LQ5H9L4 462 aa17.47■□□□□ 0.39
CPNE1-206ENST00000412056 MPHOSPH8Q99549 860 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms