RNA–Protein interactions for RNA: ENST00000411577.5

ERGIC3-204, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 601 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-204ENST00000411577 TMC4Q7Z404 712 aa11.71□□□□□ -0.53
ERGIC3-204ENST00000411577 TAOK3Q9H2K8 898 aa11.71□□□□□ -0.53
ERGIC3-204ENST00000411577 RNF181Q9P0P0 153 aa11.71□□□□□ -0.53
ERGIC3-204ENST00000411577 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.53
ERGIC3-204ENST00000411577 ZBED9Q6R2W3 1325 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 F6X3S4 739 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 PPEF1O14829 653 aaPredicted RBP11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 ALDH1L1O75891 902 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 TOMM70O94826 608 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 FKBP4Q02790 459 aaKnown RBP eCLIP11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 RASSF7Q02833 373 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 GRAPQ13588 217 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 JMYQ8N9B5 988 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 GRAPLQ8TC17 118 aaPredicted RBP11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 SMC4Q9NTJ3 1288 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 ATP6V0A2Q9Y487 856 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 ARFGEF1Q9Y6D6 1849 aa11.7□□□□□ -0.54
ERGIC3-204ENST00000411577 DLEC1Q9Y238 1755 aa11.69□□□□□ -0.54
ERGIC3-204ENST00000411577 ABCC4O15439 1325 aa11.69□□□□□ -0.54
ERGIC3-204ENST00000411577 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
ERGIC3-204ENST00000411577 CCDC152Q4G0S7 254 aa11.69□□□□□ -0.54
ERGIC3-204ENST00000411577 JARID2Q92833 1246 aaPredicted RBP11.69□□□□□ -0.54
ERGIC3-204ENST00000411577 PSMD1Q99460 953 aa11.69□□□□□ -0.54
ERGIC3-204ENST00000411577 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
ERGIC3-204ENST00000411577 RARSP54136 660 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-204ENST00000411577 RPS8P62241 208 aaKnown RBP11.68□□□□□ -0.54
ERGIC3-204ENST00000411577 SLC4A10Q6U841 1118 aa11.68□□□□□ -0.54
ERGIC3-204ENST00000411577 UBE3BQ7Z3V4 1068 aa11.68□□□□□ -0.54
ERGIC3-204ENST00000411577 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
ERGIC3-204ENST00000411577 SRCIN1Q9C0H9 1055 aa11.68□□□□□ -0.54
ERGIC3-204ENST00000411577 CACNA1FO60840 1977 aa11.68□□□□□ -0.54
ERGIC3-204ENST00000411577 ARFGEF2Q9Y6D5 1785 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 COL11A2P13942 1736 aaPredicted RBP11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 CASP7P55210 303 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 CTSWP56202 376 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 HTRA3P83110 453 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 OLFM4Q6UX06 510 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 SUPT20HQ8NEM7 779 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 BCL2L13Q9BXK5 485 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 VPS33BQ9H267 617 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 C9orf78Q9NZ63 289 aaPredicted RBP11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 SLX4Q8IY92 1834 aa11.67□□□□□ -0.54
ERGIC3-204ENST00000411577 TNRC6CQ9HCJ0 1690 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-204ENST00000411577 GRM8O00222 908 aa11.66□□□□□ -0.54
ERGIC3-204ENST00000411577 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
ERGIC3-204ENST00000411577 MPNDQ8N594 471 aa11.66□□□□□ -0.54
ERGIC3-204ENST00000411577 ARHGAP45Q92619 1136 aa11.66□□□□□ -0.54
ERGIC3-204ENST00000411577 CELF1Q92879 486 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-204ENST00000411577 CDC5LQ99459 802 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-204ENST00000411577 NOB1Q9ULX3 412 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-204ENST00000411577 KDM2BQ8NHM5 1336 aa11.65□□□□□ -0.54
ERGIC3-204ENST00000411577 IPO8O15397 1037 aaKnown RBP11.65□□□□□ -0.54
ERGIC3-204ENST00000411577 CSF1RP07333 972 aa11.65□□□□□ -0.54
ERGIC3-204ENST00000411577 IARSP41252 1262 aaKnown RBP11.65□□□□□ -0.54
ERGIC3-204ENST00000411577 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-204ENST00000411577 ANKRD18AQ8IVF6 992 aa11.65□□□□□ -0.54
ERGIC3-204ENST00000411577 RTFDC1Q9BY42 306 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-204ENST00000411577 SEC31BQ9NQW1 1179 aa11.65□□□□□ -0.54
ERGIC3-204ENST00000411577 ZNF277Q9NRM2 450 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-204ENST00000411577 KIF16BQ96L93 1317 aa11.64□□□□□ -0.55
ERGIC3-204ENST00000411577 GLTPD2A6NH11 291 aa11.64□□□□□ -0.55
ERGIC3-204ENST00000411577 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-204ENST00000411577 JDP2Q8WYK2 163 aa11.64□□□□□ -0.55
ERGIC3-204ENST00000411577 CCDC85AQ96PX6 553 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-204ENST00000411577 RTL9Q8NET4 1388 aa11.64□□□□□ -0.55
ERGIC3-204ENST00000411577 C16orf71Q8IYS4 520 aaPredicted RBP11.63□□□□□ -0.55
ERGIC3-204ENST00000411577 GREM2Q9H772 168 aa11.63□□□□□ -0.55
ERGIC3-204ENST00000411577 BSDC1Q9NW68 430 aaPredicted RBP11.63□□□□□ -0.55
ERGIC3-204ENST00000411577 NSFL1CQ9UNZ2 370 aaKnown RBP11.63□□□□□ -0.55
ERGIC3-204ENST00000411577 UTYO14607 1347 aa11.62□□□□□ -0.55
ERGIC3-204ENST00000411577 SNED1Q8TER0 1413 aa11.62□□□□□ -0.55
ERGIC3-204ENST00000411577 IGHMBP2P38935 993 aaKnown RBP11.62□□□□□ -0.55
ERGIC3-204ENST00000411577 FOXO4P98177 505 aa11.62□□□□□ -0.55
ERGIC3-204ENST00000411577 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
ERGIC3-204ENST00000411577 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
ERGIC3-204ENST00000411577 HDAC5Q9UQL6 1122 aa11.62□□□□□ -0.55
ERGIC3-204ENST00000411577 PCNTO95613 3336 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 ANKRD18BA2A2Z9 1011 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 FZD9O00144 591 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 PPIP5K2O43314 1243 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 NBPF7P0C2Y1 421 aaPredicted RBP11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 HSPA1AP0DMV8 641 aaKnown RBP11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 HSPA1BP0DMV9 641 aaKnown RBP11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 ITGA6P23229 1130 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 GPSM2P81274 684 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 IFIT5Q13325 482 aaKnown RBP11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 NIM1KQ8IY84 436 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 EYA3Q99504 573 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 USP44Q9H0E7 712 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 ANKIB1Q9P2G1 1089 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 FER1L6Q2WGJ9 1857 aa11.61□□□□□ -0.55
ERGIC3-204ENST00000411577 DDX60Q8IY21 1712 aaKnown RBP11.6□□□□□ -0.55
ERGIC3-204ENST00000411577 C6orf229H3BNL8 230 aa11.6□□□□□ -0.55
ERGIC3-204ENST00000411577 BCAR3O75815 825 aa11.6□□□□□ -0.55
ERGIC3-204ENST00000411577 EIF6P56537 245 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms