RNA–Protein interactions for RNA: ENST00000409788.7

CAB39-202, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CAB39, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-202ENST00000409788 SBF1O95248 1867 aa23.37■■□□□ 1.33
CAB39-202ENST00000409788 IPO8O15397 1037 aaKnown RBP23.37■■□□□ 1.33
CAB39-202ENST00000409788 HSP90B1P14625 803 aaKnown RBP23.37■■□□□ 1.33
CAB39-202ENST00000409788 PLA2G12BQ9BX93 195 aa23.37■■□□□ 1.33
CAB39-202ENST00000409788 NBPF7P0C2Y1 421 aaPredicted RBP23.36■■□□□ 1.33
CAB39-202ENST00000409788 CTSWP56202 376 aa23.36■■□□□ 1.33
CAB39-202ENST00000409788 ARHGAP27Q6ZUM4 889 aa23.36■■□□□ 1.33
CAB39-202ENST00000409788 CCDC85AQ96PX6 553 aaPredicted RBP23.36■■□□□ 1.33
CAB39-202ENST00000409788 C9orf78Q9NZ63 289 aaPredicted RBP23.36■■□□□ 1.33
CAB39-202ENST00000409788 RCAN3Q9UKA8 241 aa23.36■■□□□ 1.33
CAB39-202ENST00000409788 CCDC88AQ3V6T2 1871 aa23.35■■□□□ 1.33
CAB39-202ENST00000409788 UTYO14607 1347 aa23.35■■□□□ 1.33
CAB39-202ENST00000409788 DDX46Q7L014 1031 aaKnown RBP23.35■■□□□ 1.33
CAB39-202ENST00000409788 TTLL11Q8NHH1 800 aa23.35■■□□□ 1.33
CAB39-202ENST00000409788 USP44Q9H0E7 712 aa23.35■■□□□ 1.33
CAB39-202ENST00000409788 CCT4P50991 539 aaKnown RBP23.34■■□□□ 1.33
CAB39-202ENST00000409788 ZKSCAN2Q63HK3 967 aa23.34■■□□□ 1.33
CAB39-202ENST00000409788 CLUAP1Q96AJ1 413 aa23.34■■□□□ 1.33
CAB39-202ENST00000409788 SEC31BQ9NQW1 1179 aa23.34■■□□□ 1.33
CAB39-202ENST00000409788 FOXO4P98177 505 aa23.33■■□□□ 1.33
CAB39-202ENST00000409788 EPHA10Q5JZY3 1008 aa23.33■■□□□ 1.33
CAB39-202ENST00000409788 CELF1Q92879 486 aaKnown RBP23.33■■□□□ 1.33
CAB39-202ENST00000409788 KAZALD1Q96I82 304 aa23.33■■□□□ 1.33
CAB39-202ENST00000409788 SNED1Q8TER0 1413 aa23.33■■□□□ 1.33
CAB39-202ENST00000409788 GRAPQ13588 217 aa23.33■■□□□ 1.32
CAB39-202ENST00000409788 CCDC152Q4G0S7 254 aa23.33■■□□□ 1.32
CAB39-202ENST00000409788 INTS3Q68E01 1043 aaKnown RBP23.33■■□□□ 1.32
CAB39-202ENST00000409788 GRAPLQ8TC17 118 aaPredicted RBP23.33■■□□□ 1.32
CAB39-202ENST00000409788 NFKBIEO00221 500 aa23.32■■□□□ 1.32
CAB39-202ENST00000409788 PPEF1O14829 653 aaPredicted RBP23.32■■□□□ 1.32
CAB39-202ENST00000409788 GREM2Q9H772 168 aa23.32■■□□□ 1.32
CAB39-202ENST00000409788 SPEF2Q9C093 1822 aa23.31■■□□□ 1.32
CAB39-202ENST00000409788 CSF1RP07333 972 aa23.31■■□□□ 1.32
CAB39-202ENST00000409788 SUCLG2Q96I99 432 aa23.31■■□□□ 1.32
CAB39-202ENST00000409788 LRRC37AA6NMS7 1700 aa23.31■■□□□ 1.32
CAB39-202ENST00000409788 BBOX1O75936 387 aa23.3■■□□□ 1.32
CAB39-202ENST00000409788 RASSF7Q02833 373 aa23.3■■□□□ 1.32
CAB39-202ENST00000409788 RTL9Q8NET4 1388 aa23.3■■□□□ 1.32
CAB39-202ENST00000409788 RLBP1P12271 317 aa23.3■■□□□ 1.32
CAB39-202ENST00000409788 PRELPP51888 382 aa23.3■■□□□ 1.32
CAB39-202ENST00000409788 ATP6V0A2Q9Y487 856 aa23.29■■□□□ 1.32
CAB39-202ENST00000409788 FAM161AQ3B820 660 aa23.28■■□□□ 1.32
CAB39-202ENST00000409788 CCDC93Q567U6 631 aa23.28■■□□□ 1.32
CAB39-202ENST00000409788 SOGA3Q5TF21 947 aa23.28■■□□□ 1.32
CAB39-202ENST00000409788 TMEM57Q8N5G2 664 aa23.28■■□□□ 1.32
CAB39-202ENST00000409788 RPS8P62241 208 aaKnown RBP23.27■■□□□ 1.32
CAB39-202ENST00000409788 PLIN1O60240 522 aa23.26■■□□□ 1.31
CAB39-202ENST00000409788 LMBR1LQ6UX01 489 aa23.26■■□□□ 1.31
CAB39-202ENST00000409788 MEIS3Q99687 375 aa23.26■■□□□ 1.31
CAB39-202ENST00000409788 SP8Q8IXZ3 490 aa23.26■■□□□ 1.31
CAB39-202ENST00000409788 DZIP1LQ8IYY4 767 aaKnown RBP23.26■■□□□ 1.31
CAB39-202ENST00000409788 BICC1Q9H694 974 aaKnown RBP23.26■■□□□ 1.31
CAB39-202ENST00000409788 DICER1Q9UPY3 1922 aaKnown RBP23.26■■□□□ 1.31
CAB39-202ENST00000409788 ITGA6P23229 1130 aa23.25■■□□□ 1.31
CAB39-202ENST00000409788 CC2D2BQ6DHV5 1058 aa23.25■■□□□ 1.31
CAB39-202ENST00000409788 LTBP3Q9NS15 1303 aa23.25■■□□□ 1.31
CAB39-202ENST00000409788 FTSJ3Q8IY81 847 aaKnown RBP23.24■■□□□ 1.31
CAB39-202ENST00000409788 RTKN2Q8IZC4 609 aa23.24■■□□□ 1.31
CAB39-202ENST00000409788 ANKRD44Q8N8A2 993 aa23.24■■□□□ 1.31
CAB39-202ENST00000409788 TAOK3Q9H2K8 898 aa23.24■■□□□ 1.31
CAB39-202ENST00000409788 LTBP1Q14766 1721 aa23.24■■□□□ 1.31
CAB39-202ENST00000409788 RABL6Q3YEC7 729 aaPredicted RBP23.23■■□□□ 1.31
CAB39-202ENST00000409788 TMC4Q7Z404 712 aa23.23■■□□□ 1.31
CAB39-202ENST00000409788 PANK1Q8TE04 598 aa23.23■■□□□ 1.31
CAB39-202ENST00000409788 UBTFL1P0CB47 393 aaPredicted RBP23.22■■□□□ 1.31
CAB39-202ENST00000409788 ANKRD18AQ8IVF6 992 aa23.22■■□□□ 1.31
CAB39-202ENST00000409788 CDC5LQ99459 802 aaKnown RBP23.22■■□□□ 1.31
CAB39-202ENST00000409788 CHMP3Q9Y3E7 222 aa23.22■■□□□ 1.31
CAB39-202ENST00000409788 DUOX1Q9NRD9 1551 aa23.22■■□□□ 1.31
CAB39-202ENST00000409788 FKBP4Q02790 459 aaKnown RBP eCLIP23.22■■□□□ 1.31
CAB39-202ENST00000409788 C9orf131Q5VYM1 1079 aa23.22■■□□□ 1.31
CAB39-202ENST00000409788 LMNB1P20700 586 aa23.21■■□□□ 1.31
CAB39-202ENST00000409788 PSMD1Q99460 953 aa23.21■■□□□ 1.31
CAB39-202ENST00000409788 IFIT5Q13325 482 aaKnown RBP23.2■■□□□ 1.3
CAB39-202ENST00000409788 ZNF277Q9NRM2 450 aaPredicted RBP23.2■■□□□ 1.3
CAB39-202ENST00000409788 RNF181Q9P0P0 153 aa23.2■■□□□ 1.3
CAB39-202ENST00000409788 LRRFIP2Q9Y608 721 aaKnown RBP23.2■■□□□ 1.3
CAB39-202ENST00000409788 ANKRD18BA2A2Z9 1011 aa23.19■■□□□ 1.3
CAB39-202ENST00000409788 GRIPAP1Q4V328 841 aa23.19■■□□□ 1.3
CAB39-202ENST00000409788 BSDC1Q9NW68 430 aaPredicted RBP23.19■■□□□ 1.3
CAB39-202ENST00000409788 TIAM2Q8IVF5 1701 aa23.19■■□□□ 1.3
CAB39-202ENST00000409788 YY1P25490 414 aa23.19■■□□□ 1.3
CAB39-202ENST00000409788 GPSM2P81274 684 aa23.19■■□□□ 1.3
CAB39-202ENST00000409788 ITPRIPQ8IWB1 547 aa23.19■■□□□ 1.3
CAB39-202ENST00000409788 MPNDQ8N594 471 aa23.19■■□□□ 1.3
CAB39-202ENST00000409788 ZNF594Q96JF6 807 aaPredicted RBP23.19■■□□□ 1.3
CAB39-202ENST00000409788 TMX4Q9H1E5 349 aaPredicted RBP23.19■■□□□ 1.3
CAB39-202ENST00000409788 A0A1B0GUL6 1792 aa23.18■■□□□ 1.3
CAB39-202ENST00000409788 GNAI3P08754 354 aa23.18■■□□□ 1.3
CAB39-202ENST00000409788 CCDC57Q2TAC2 916 aa23.18■■□□□ 1.3
CAB39-202ENST00000409788 C20orf194Q5TEA3 1177 aa23.18■■□□□ 1.3
CAB39-202ENST00000409788 RTFDC1Q9BY42 306 aaPredicted RBP23.18■■□□□ 1.3
CAB39-202ENST00000409788 COL4A5P29400 1685 aa23.17■■□□□ 1.3
CAB39-202ENST00000409788 DPP8Q6V1X1 898 aaPredicted RBP23.17■■□□□ 1.3
CAB39-202ENST00000409788 NSFL1CQ9UNZ2 370 aaKnown RBP23.17■■□□□ 1.3
CAB39-202ENST00000409788 ZBTB7BO15156 539 aaPredicted RBP23.16■■□□□ 1.3
CAB39-202ENST00000409788 IGHMBP2P38935 993 aaKnown RBP23.16■■□□□ 1.3
CAB39-202ENST00000409788 MINPP1Q9UNW1 487 aa23.16■■□□□ 1.3
CAB39-202ENST00000409788 POLLQ9UGP5 575 aa23.15■■□□□ 1.3
CAB39-202ENST00000409788 MS4A1P11836 297 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms