RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 RFX5P48382 616 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-206ENST00000409754 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
LIMS2-206ENST00000409754 USPL1Q5W0Q7 1092 aa17.26■□□□□ 0.35
LIMS2-206ENST00000409754 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
LIMS2-206ENST00000409754 GIGYF2Q6Y7W6 1299 aaKnown RBP17.26■□□□□ 0.35
LIMS2-206ENST00000409754 DAXXQ9UER7 740 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-206ENST00000409754 NARFQ9UHQ1 456 aa17.26■□□□□ 0.35
LIMS2-206ENST00000409754 NRXN2Q9P2S2 1712 aa17.26■□□□□ 0.35
LIMS2-206ENST00000409754 GOLGB1Q14789 3259 aaKnown RBP17.26■□□□□ 0.35
LIMS2-206ENST00000409754 SLC16A10Q8TF71 515 aa17.25■□□□□ 0.35
LIMS2-206ENST00000409754 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
LIMS2-206ENST00000409754 ANKRD36CQ5JPF3 1778 aa17.25■□□□□ 0.35
LIMS2-206ENST00000409754 SASH1O94885 1247 aa17.25■□□□□ 0.35
LIMS2-206ENST00000409754 FOXO4P98177 505 aa17.25■□□□□ 0.35
LIMS2-206ENST00000409754 BECN1Q14457 450 aa17.25■□□□□ 0.35
LIMS2-206ENST00000409754 PI4K2BQ8TCG2 481 aa17.25■□□□□ 0.35
LIMS2-206ENST00000409754 ERVV-1B6SEH8 477 aa17.24■□□□□ 0.35
LIMS2-206ENST00000409754 RFC4P35249 363 aa17.24■□□□□ 0.35
LIMS2-206ENST00000409754 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
LIMS2-206ENST00000409754 KIAA1551Q9HCM1 1747 aa17.24■□□□□ 0.35
LIMS2-206ENST00000409754 DDR1Q08345 913 aa17.23■□□□□ 0.35
LIMS2-206ENST00000409754 LMBR1LQ6UX01 489 aa17.23■□□□□ 0.35
LIMS2-206ENST00000409754 DZIP3Q86Y13 1208 aaKnown RBP17.23■□□□□ 0.35
LIMS2-206ENST00000409754 PCCAP05165 728 aaPredicted RBP17.22■□□□□ 0.35
LIMS2-206ENST00000409754 IFIT2P09913 472 aaKnown RBP17.22■□□□□ 0.35
LIMS2-206ENST00000409754 HLFQ16534 295 aa17.22■□□□□ 0.35
LIMS2-206ENST00000409754 GPATCH3Q96I76 525 aa17.22■□□□□ 0.35
LIMS2-206ENST00000409754 KIF13BQ9NQT8 1826 aa17.22■□□□□ 0.35
LIMS2-206ENST00000409754 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
LIMS2-206ENST00000409754 ERC2O15083 957 aa17.21■□□□□ 0.35
LIMS2-206ENST00000409754 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
LIMS2-206ENST00000409754 AACSQ86V21 672 aa17.21■□□□□ 0.35
LIMS2-206ENST00000409754 ZBTB38Q8NAP3 1195 aaPredicted RBP17.21■□□□□ 0.35
LIMS2-206ENST00000409754 KLHDC4Q8TBB5 520 aa17.21■□□□□ 0.35
LIMS2-206ENST00000409754 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.35
LIMS2-206ENST00000409754 SIL1Q9H173 461 aa17.21■□□□□ 0.35
LIMS2-206ENST00000409754 ECHDC1Q9NTX5 307 aa17.21■□□□□ 0.35
LIMS2-206ENST00000409754 ARXQ96QS3 562 aa17.21■□□□□ 0.35
LIMS2-206ENST00000409754 SPON1Q9HCB6 807 aa17.21■□□□□ 0.35
LIMS2-206ENST00000409754 CDHR2Q9BYE9 1310 aa17.2■□□□□ 0.34
LIMS2-206ENST00000409754 REC8O95072 547 aa17.2■□□□□ 0.34
LIMS2-206ENST00000409754 TM4SF1P30408 202 aa17.2■□□□□ 0.34
LIMS2-206ENST00000409754 NFIXQ14938 502 aa17.2■□□□□ 0.34
LIMS2-206ENST00000409754 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
LIMS2-206ENST00000409754 RILPL2Q969X0 211 aa17.2■□□□□ 0.34
LIMS2-206ENST00000409754 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
LIMS2-206ENST00000409754 CHMLP26374 656 aa17.19■□□□□ 0.34
LIMS2-206ENST00000409754 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
LIMS2-206ENST00000409754 RTL5Q5HYW3 569 aaPredicted RBP17.19■□□□□ 0.34
LIMS2-206ENST00000409754 NLRP10Q86W26 655 aa17.19■□□□□ 0.34
LIMS2-206ENST00000409754 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
LIMS2-206ENST00000409754 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
LIMS2-206ENST00000409754 ZPR1O75312 459 aa17.18■□□□□ 0.34
LIMS2-206ENST00000409754 MMP10P09238 476 aa17.18■□□□□ 0.34
LIMS2-206ENST00000409754 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
LIMS2-206ENST00000409754 CHMP3Q9Y3E7 222 aa17.18■□□□□ 0.34
LIMS2-206ENST00000409754 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.18■□□□□ 0.34
LIMS2-206ENST00000409754 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
LIMS2-206ENST00000409754 ESYT1Q9BSJ8 1104 aa17.18■□□□□ 0.34
LIMS2-206ENST00000409754 CARMIL3Q8ND23 1372 aa17.17■□□□□ 0.34
LIMS2-206ENST00000409754 UBN2Q6ZU65 1347 aa17.17■□□□□ 0.34
LIMS2-206ENST00000409754 ZNF34Q8IZ26 560 aa17.17■□□□□ 0.34
LIMS2-206ENST00000409754 KIF2CQ99661 725 aa17.17■□□□□ 0.34
LIMS2-206ENST00000409754 ANP32EQ9BTT0 268 aa17.17■□□□□ 0.34
LIMS2-206ENST00000409754 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
LIMS2-206ENST00000409754 C10orf71Q711Q0 1435 aa17.16■□□□□ 0.34
LIMS2-206ENST00000409754 CSF1RP07333 972 aa17.16■□□□□ 0.34
LIMS2-206ENST00000409754 GPTP24298 496 aa17.16■□□□□ 0.34
LIMS2-206ENST00000409754 NLGN1Q8N2Q7 840 aa17.16■□□□□ 0.34
LIMS2-206ENST00000409754 FAM89AQ96GI7 184 aa17.16■□□□□ 0.34
LIMS2-206ENST00000409754 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
LIMS2-206ENST00000409754 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
LIMS2-206ENST00000409754 CIAO1O76071 339 aa17.15■□□□□ 0.34
LIMS2-206ENST00000409754 TFCP2Q12800 502 aa17.15■□□□□ 0.34
LIMS2-206ENST00000409754 TNNI3KQ59H18 835 aa17.15■□□□□ 0.34
LIMS2-206ENST00000409754 SNX21Q969T3 373 aa17.15■□□□□ 0.34
LIMS2-206ENST00000409754 FBXO3Q9UK99 471 aa17.15■□□□□ 0.34
LIMS2-206ENST00000409754 FPGT-TNNI3KV9GXZ4 949 aa17.15■□□□□ 0.34
LIMS2-206ENST00000409754 COL11A2P13942 1736 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-206ENST00000409754 IL15P40933 162 aaPredicted RBP17.14■□□□□ 0.33
LIMS2-206ENST00000409754 ATG9AQ7Z3C6 839 aa17.14■□□□□ 0.33
LIMS2-206ENST00000409754 GPR108Q9NPR9 543 aa17.14■□□□□ 0.33
LIMS2-206ENST00000409754 UTRNP46939 3433 aa17.14■□□□□ 0.33
LIMS2-206ENST00000409754 AK9Q5TCS8 1911 aa17.14■□□□□ 0.33
LIMS2-206ENST00000409754 EYA2O00167 538 aa17.14■□□□□ 0.33
LIMS2-206ENST00000409754 RGL2O15211 777 aa17.14■□□□□ 0.33
LIMS2-206ENST00000409754 EPB41L2O43491 1005 aaKnown RBP17.14■□□□□ 0.33
LIMS2-206ENST00000409754 CCDC57Q2TAC2 916 aa17.14■□□□□ 0.33
LIMS2-206ENST00000409754 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
LIMS2-206ENST00000409754 BICDL1Q6ZP65 573 aa17.14■□□□□ 0.33
LIMS2-206ENST00000409754 TLR7Q9NYK1 1049 aaKnown RBP17.14■□□□□ 0.33
LIMS2-206ENST00000409754 MAP4K4O95819 1239 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-206ENST00000409754 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
LIMS2-206ENST00000409754 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
LIMS2-206ENST00000409754 BRCA1P38398 1863 aaKnown RBP17.12■□□□□ 0.33
LIMS2-206ENST00000409754 PARP10Q53GL7 1025 aa17.12■□□□□ 0.33
LIMS2-206ENST00000409754 IRS4O14654 1257 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-206ENST00000409754 HSCBQ8IWL3 235 aa17.11■□□□□ 0.33
LIMS2-206ENST00000409754 FHDC1Q9C0D6 1143 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-206ENST00000409754 DBNLQ9UJU6 430 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms