RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SLC51AQ86UW1 340 aa19.05■□□□□ 0.64
CBX3-203ENST00000409747 FAM89AQ96GI7 184 aa19.05■□□□□ 0.64
CBX3-203ENST00000409747 ELL2O00472 640 aaPredicted RBP19.04■□□□□ 0.64
CBX3-203ENST00000409747 CCDC30Q5VVM6 783 aa19.04■□□□□ 0.64
CBX3-203ENST00000409747 DDX58O95786 925 aaKnown RBP19.03■□□□□ 0.64
CBX3-203ENST00000409747 SF3B3Q15393 1217 aaKnown RBP19.03■□□□□ 0.64
CBX3-203ENST00000409747 CCDC27Q2M243 656 aa19.03■□□□□ 0.64
CBX3-203ENST00000409747 ZNRF3Q9ULT6 936 aa19.03■□□□□ 0.64
CBX3-203ENST00000409747 C8orf58Q8NAV2 365 aa19.03■□□□□ 0.64
CBX3-203ENST00000409747 ITGBL1O95965 494 aaPredicted RBP19.02■□□□□ 0.63
CBX3-203ENST00000409747 SCNN1DP51172 638 aa19.02■□□□□ 0.63
CBX3-203ENST00000409747 KIAA2012Q0VF49 1180 aa19.02■□□□□ 0.63
CBX3-203ENST00000409747 ZNF428Q96B54 188 aa19.02■□□□□ 0.63
CBX3-203ENST00000409747 PHAXQ9H814 394 aaKnown RBP19.02■□□□□ 0.63
CBX3-203ENST00000409747 LTBP1Q14766 1721 aa19.02■□□□□ 0.63
CBX3-203ENST00000409747 TMEM88BA6NKF7 163 aa19.01■□□□□ 0.63
CBX3-203ENST00000409747 IRS4O14654 1257 aaPredicted RBP19.01■□□□□ 0.63
CBX3-203ENST00000409747 CNTROBQ8N137 903 aa19.01■□□□□ 0.63
CBX3-203ENST00000409747 ZBTB38Q8NAP3 1195 aaPredicted RBP19.01■□□□□ 0.63
CBX3-203ENST00000409747 TAF1P21675 1872 aa19■□□□□ 0.63
CBX3-203ENST00000409747 USP50Q70EL3 339 aaPredicted RBP19■□□□□ 0.63
CBX3-203ENST00000409747 CNTNAP1P78357 1384 aa19■□□□□ 0.63
CBX3-203ENST00000409747 DUOX1Q9NRD9 1551 aa19■□□□□ 0.63
CBX3-203ENST00000409747 CDHR2Q9BYE9 1310 aa19■□□□□ 0.63
CBX3-203ENST00000409747 CCDC184Q52MB2 194 aa19■□□□□ 0.63
CBX3-203ENST00000409747 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
CBX3-203ENST00000409747 RTL5Q5HYW3 569 aaPredicted RBP19■□□□□ 0.63
CBX3-203ENST00000409747 CCDC191Q8NCU4 936 aa19■□□□□ 0.63
CBX3-203ENST00000409747 MYD88Q99836 296 aa19■□□□□ 0.63
CBX3-203ENST00000409747 MKRN1Q9UHC7 482 aaKnown RBP19■□□□□ 0.63
CBX3-203ENST00000409747 ANP32CO43423 234 aa18.99■□□□□ 0.63
CBX3-203ENST00000409747 TNIP1Q15025 636 aa18.99■□□□□ 0.63
CBX3-203ENST00000409747 MAP1SQ66K74 1059 aaPredicted RBP18.99■□□□□ 0.63
CBX3-203ENST00000409747 STK31Q9BXU1 1019 aa18.99■□□□□ 0.63
CBX3-203ENST00000409747 MRS2Q9HD23 443 aa18.99■□□□□ 0.63
CBX3-203ENST00000409747 EPS15P42566 896 aa18.98■□□□□ 0.63
CBX3-203ENST00000409747 CXCL9Q07325 125 aa18.98■□□□□ 0.63
CBX3-203ENST00000409747 CIAPIN1Q6FI81 312 aa18.98■□□□□ 0.63
CBX3-203ENST00000409747 WWC1Q8IX03 1113 aa18.98■□□□□ 0.63
CBX3-203ENST00000409747 CELF1Q92879 486 aaKnown RBP18.98■□□□□ 0.63
CBX3-203ENST00000409747 ADARB2Q9NS39 739 aaKnown RBP18.98■□□□□ 0.63
CBX3-203ENST00000409747 CWC25Q9NXE8 425 aaPredicted RBP18.98■□□□□ 0.63
CBX3-203ENST00000409747 GPRC5DQ9NZD1 345 aa18.98■□□□□ 0.63
CBX3-203ENST00000409747 IL16Q14005 1332 aa18.98■□□□□ 0.63
CBX3-203ENST00000409747 PCCAP05165 728 aaPredicted RBP18.97■□□□□ 0.63
CBX3-203ENST00000409747 HSPA1AP0DMV8 641 aaKnown RBP18.97■□□□□ 0.63
CBX3-203ENST00000409747 HSPA1BP0DMV9 641 aaKnown RBP18.97■□□□□ 0.63
CBX3-203ENST00000409747 TSR2Q969E8 191 aaKnown RBP18.97■□□□□ 0.63
CBX3-203ENST00000409747 METTL22Q9BUU2 404 aaPredicted RBP18.97■□□□□ 0.63
CBX3-203ENST00000409747 ZNF316A6NFI3 1004 aaPredicted RBP18.97■□□□□ 0.63
CBX3-203ENST00000409747 NSFL1CQ9UNZ2 370 aaKnown RBP18.97■□□□□ 0.63
CBX3-203ENST00000409747 WASHC4Q2M389 1173 aa18.96■□□□□ 0.63
CBX3-203ENST00000409747 TSPYL6Q8N831 410 aa18.96■□□□□ 0.63
CBX3-203ENST00000409747 EYA3Q99504 573 aa18.96■□□□□ 0.63
CBX3-203ENST00000409747 GMPSP49915 693 aaPredicted RBP18.95■□□□□ 0.62
CBX3-203ENST00000409747 RPS8P62241 208 aaKnown RBP18.95■□□□□ 0.62
CBX3-203ENST00000409747 CCDC152Q4G0S7 254 aa18.95■□□□□ 0.62
CBX3-203ENST00000409747 BCL2L13Q9BXK5 485 aa18.95■□□□□ 0.62
CBX3-203ENST00000409747 PDE8AO60658 829 aa18.94■□□□□ 0.62
CBX3-203ENST00000409747 NEXNQ0ZGT2 675 aa18.94■□□□□ 0.62
CBX3-203ENST00000409747 TWISTNBQ3B726 338 aaPredicted RBP18.94■□□□□ 0.62
CBX3-203ENST00000409747 KSR2Q6VAB6 950 aa18.94■□□□□ 0.62
CBX3-203ENST00000409747 MAP3K2Q9Y2U5 619 aa18.94■□□□□ 0.62
CBX3-203ENST00000409747 C6orf229H3BNL8 230 aa18.94■□□□□ 0.62
CBX3-203ENST00000409747 RAD17O75943 681 aa18.94■□□□□ 0.62
CBX3-203ENST00000409747 GPSM2P81274 684 aa18.93■□□□□ 0.62
CBX3-203ENST00000409747 PI4KAP2A4QPH2 592 aa18.92■□□□□ 0.62
CBX3-203ENST00000409747 RASSF10A6NK89 507 aa18.92■□□□□ 0.62
CBX3-203ENST00000409747 PI4KAP1Q8N8J0 262 aa18.92■□□□□ 0.62
CBX3-203ENST00000409747 COL4A1P02462 1669 aa18.92■□□□□ 0.62
CBX3-203ENST00000409747 YDJCA8MPS7 323 aa18.91■□□□□ 0.62
CBX3-203ENST00000409747 COL13A1Q5TAT6 717 aaPredicted RBP18.91■□□□□ 0.62
CBX3-203ENST00000409747 PODXL2Q9NZ53 605 aa18.91■□□□□ 0.62
CBX3-203ENST00000409747 POLLQ9UGP5 575 aa18.91■□□□□ 0.62
CBX3-203ENST00000409747 ABT1Q9ULW3 272 aaKnown RBP18.91■□□□□ 0.62
CBX3-203ENST00000409747 TRPM7Q96QT4 1865 aa18.91■□□□□ 0.62
CBX3-203ENST00000409747 VEGFBP49765 207 aa18.91■□□□□ 0.62
CBX3-203ENST00000409747 DEFB115Q30KQ5 88 aa18.91■□□□□ 0.62
CBX3-203ENST00000409747 TBC1D16Q8TBP0 767 aa18.91■□□□□ 0.62
CBX3-203ENST00000409747 SEC31BQ9NQW1 1179 aa18.91■□□□□ 0.62
CBX3-203ENST00000409747 RIMBP2O15034 1052 aa18.9■□□□□ 0.62
CBX3-203ENST00000409747 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
CBX3-203ENST00000409747 ZC3H15Q8WU90 426 aaKnown RBP18.9■□□□□ 0.62
CBX3-203ENST00000409747 ANKIB1Q9P2G1 1089 aa18.9■□□□□ 0.62
CBX3-203ENST00000409747 H7C1D1 291 aa18.89■□□□□ 0.61
CBX3-203ENST00000409747 SLC4A2P04920 1241 aa18.89■□□□□ 0.61
CBX3-203ENST00000409747 ANKRD18AQ8IVF6 992 aa18.89■□□□□ 0.61
CBX3-203ENST00000409747 DPF2Q92785 391 aa18.89■□□□□ 0.61
CBX3-203ENST00000409747 ZC3H12CQ9C0D7 883 aaKnown RBP18.89■□□□□ 0.61
CBX3-203ENST00000409747 DBNDD1Q9H9R9 158 aa18.89■□□□□ 0.61
CBX3-203ENST00000409747 MYH3P11055 1940 aa18.89■□□□□ 0.61
CBX3-203ENST00000409747 FANCIQ9NVI1 1328 aa18.89■□□□□ 0.61
CBX3-203ENST00000409747 CACNA1FO60840 1977 aa18.89■□□□□ 0.61
CBX3-203ENST00000409747 ECE2O60344 883 aa18.88■□□□□ 0.61
CBX3-203ENST00000409747 IGKV5-2P06315 115 aa18.88■□□□□ 0.61
CBX3-203ENST00000409747 RPS12P25398 132 aaKnown RBP18.88■□□□□ 0.61
CBX3-203ENST00000409747 CTSWP56202 376 aa18.88■□□□□ 0.61
CBX3-203ENST00000409747 AIDAQ96BJ3 306 aa18.88■□□□□ 0.61
CBX3-203ENST00000409747 CDC5LQ99459 802 aaKnown RBP18.88■□□□□ 0.61
CBX3-203ENST00000409747 CNOT7Q9UIV1 285 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms