RNA–Protein interactions for RNA: ENST00000409295.5

COPS7B-205, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-205ENST00000409295 OLFM4Q6UX06 510 aa18.22■□□□□ 0.51
COPS7B-205ENST00000409295 C9orf78Q9NZ63 289 aaPredicted RBP18.22■□□□□ 0.51
COPS7B-205ENST00000409295 COL11A2P13942 1736 aaPredicted RBP18.22■□□□□ 0.51
COPS7B-205ENST00000409295 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
COPS7B-205ENST00000409295 ZC3H4Q9UPT8 1303 aaKnown RBP18.22■□□□□ 0.51
COPS7B-205ENST00000409295 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
COPS7B-205ENST00000409295 RPS8P62241 208 aaKnown RBP18.21■□□□□ 0.51
COPS7B-205ENST00000409295 UTRNP46939 3433 aa18.21■□□□□ 0.51
COPS7B-205ENST00000409295 DPY19L2Q6NUT2 758 aa18.2■□□□□ 0.5
COPS7B-205ENST00000409295 SUPT20HQ8NEM7 779 aa18.2■□□□□ 0.5
COPS7B-205ENST00000409295 PSMD1Q99460 953 aa18.2■□□□□ 0.5
COPS7B-205ENST00000409295 ZNF277Q9NRM2 450 aaPredicted RBP18.2■□□□□ 0.5
COPS7B-205ENST00000409295 ZBED9Q6R2W3 1325 aa18.2■□□□□ 0.5
COPS7B-205ENST00000409295 KDM2BQ8NHM5 1336 aa18.2■□□□□ 0.5
COPS7B-205ENST00000409295 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
COPS7B-205ENST00000409295 CTSWP56202 376 aa18.19■□□□□ 0.5
COPS7B-205ENST00000409295 DPP8Q6V1X1 898 aaPredicted RBP18.19■□□□□ 0.5
COPS7B-205ENST00000409295 MPNDQ8N594 471 aa18.19■□□□□ 0.5
COPS7B-205ENST00000409295 CCDC85AQ96PX6 553 aaPredicted RBP18.19■□□□□ 0.5
COPS7B-205ENST00000409295 TNRC6CQ9HCJ0 1690 aaKnown RBP18.18■□□□□ 0.5
COPS7B-205ENST00000409295 IPO8O15397 1037 aaKnown RBP18.18■□□□□ 0.5
COPS7B-205ENST00000409295 PRELPP51888 382 aa18.18■□□□□ 0.5
COPS7B-205ENST00000409295 ANKRD18AQ8IVF6 992 aa18.18■□□□□ 0.5
COPS7B-205ENST00000409295 TTLL11Q8NHH1 800 aa18.18■□□□□ 0.5
COPS7B-205ENST00000409295 JDP2Q8WYK2 163 aa18.18■□□□□ 0.5
COPS7B-205ENST00000409295 CDC5LQ99459 802 aaKnown RBP18.18■□□□□ 0.5
COPS7B-205ENST00000409295 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
COPS7B-205ENST00000409295 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
COPS7B-205ENST00000409295 NOB1Q9ULX3 412 aaKnown RBP18.18■□□□□ 0.5
COPS7B-205ENST00000409295 GRM8O00222 908 aa18.17■□□□□ 0.5
COPS7B-205ENST00000409295 IARSP41252 1262 aaKnown RBP18.17■□□□□ 0.5
COPS7B-205ENST00000409295 BRPF1P55201 1214 aaPredicted RBP18.17■□□□□ 0.5
COPS7B-205ENST00000409295 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
COPS7B-205ENST00000409295 VPS33BQ9H267 617 aa18.17■□□□□ 0.5
COPS7B-205ENST00000409295 SEC31BQ9NQW1 1179 aa18.16■□□□□ 0.5
COPS7B-205ENST00000409295 NSFL1CQ9UNZ2 370 aaKnown RBP18.16■□□□□ 0.5
COPS7B-205ENST00000409295 GLTPD2A6NH11 291 aa18.15■□□□□ 0.5
COPS7B-205ENST00000409295 CASP7P55210 303 aa18.15■□□□□ 0.5
COPS7B-205ENST00000409295 LARGE2Q8N3Y3 721 aa18.15■□□□□ 0.5
COPS7B-205ENST00000409295 IGHMBP2P38935 993 aaKnown RBP18.14■□□□□ 0.49
COPS7B-205ENST00000409295 CCT4P50991 539 aaKnown RBP18.14■□□□□ 0.49
COPS7B-205ENST00000409295 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
COPS7B-205ENST00000409295 GREM2Q9H772 168 aa18.14■□□□□ 0.49
COPS7B-205ENST00000409295 KIF16BQ96L93 1317 aa18.14■□□□□ 0.49
COPS7B-205ENST00000409295 C6orf229H3BNL8 230 aa18.13■□□□□ 0.49
COPS7B-205ENST00000409295 PPIP5K2O43314 1243 aa18.13■□□□□ 0.49
COPS7B-205ENST00000409295 CSF1RP07333 972 aa18.13■□□□□ 0.49
COPS7B-205ENST00000409295 C16orf71Q8IYS4 520 aaPredicted RBP18.13■□□□□ 0.49
COPS7B-205ENST00000409295 RTFDC1Q9BY42 306 aaPredicted RBP18.13■□□□□ 0.49
COPS7B-205ENST00000409295 ANKIB1Q9P2G1 1089 aa18.13■□□□□ 0.49
COPS7B-205ENST00000409295 CHMP3Q9Y3E7 222 aa18.13■□□□□ 0.49
COPS7B-205ENST00000409295 ANKRD18BA2A2Z9 1011 aa18.12■□□□□ 0.49
COPS7B-205ENST00000409295 ITGA6P23229 1130 aa18.12■□□□□ 0.49
COPS7B-205ENST00000409295 EIF6P56537 245 aaKnown RBP18.12■□□□□ 0.49
COPS7B-205ENST00000409295 IFIT5Q13325 482 aaKnown RBP18.12■□□□□ 0.49
COPS7B-205ENST00000409295 NIM1KQ8IY84 436 aa18.12■□□□□ 0.49
COPS7B-205ENST00000409295 FRAT1Q92837 279 aaPredicted RBP18.12■□□□□ 0.49
COPS7B-205ENST00000409295 EYA3Q99504 573 aa18.12■□□□□ 0.49
COPS7B-205ENST00000409295 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
COPS7B-205ENST00000409295 RRAGCQ9HB90 399 aa18.12■□□□□ 0.49
COPS7B-205ENST00000409295 HDAC5Q9UQL6 1122 aa18.12■□□□□ 0.49
COPS7B-205ENST00000409295 CACNA1SQ13698 1873 aa18.12■□□□□ 0.49
COPS7B-205ENST00000409295 GPSM2P81274 684 aa18.11■□□□□ 0.49
COPS7B-205ENST00000409295 WASHC4Q2M389 1173 aa18.11■□□□□ 0.49
COPS7B-205ENST00000409295 CCDC57Q2TAC2 916 aa18.11■□□□□ 0.49
COPS7B-205ENST00000409295 TAF7LQ5H9L4 462 aa18.11■□□□□ 0.49
COPS7B-205ENST00000409295 LMBR1LQ6UX01 489 aa18.11■□□□□ 0.49
COPS7B-205ENST00000409295 BSDC1Q9NW68 430 aaPredicted RBP18.11■□□□□ 0.49
COPS7B-205ENST00000409295 RTL9Q8NET4 1388 aa18.11■□□□□ 0.49
COPS7B-205ENST00000409295 FER1L6Q2WGJ9 1857 aa18.1■□□□□ 0.49
COPS7B-205ENST00000409295 DDX60Q8IY21 1712 aaKnown RBP18.1■□□□□ 0.49
COPS7B-205ENST00000409295 BCAR3O75815 825 aa18.1■□□□□ 0.49
COPS7B-205ENST00000409295 VEGFAP15692 232 aaPredicted RBP18.1■□□□□ 0.49
COPS7B-205ENST00000409295 FOXO4P98177 505 aa18.1■□□□□ 0.49
COPS7B-205ENST00000409295 NMRK2Q9NPI5 230 aa18.1■□□□□ 0.49
COPS7B-205ENST00000409295 SBF1O95248 1867 aa18.09■□□□□ 0.49
COPS7B-205ENST00000409295 G3V3G9 751 aa18.09■□□□□ 0.49
COPS7B-205ENST00000409295 NBPF7P0C2Y1 421 aaPredicted RBP18.09■□□□□ 0.49
COPS7B-205ENST00000409295 AOC3Q16853 763 aa18.09■□□□□ 0.49
COPS7B-205ENST00000409295 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
COPS7B-205ENST00000409295 DCAF8Q5TAQ9 597 aa18.09■□□□□ 0.49
COPS7B-205ENST00000409295 ZC3H12CQ9C0D7 883 aaKnown RBP18.09■□□□□ 0.49
COPS7B-205ENST00000409295 GGA1Q9UJY5 639 aa18.09■□□□□ 0.49
COPS7B-205ENST00000409295 UTYO14607 1347 aa18.08■□□□□ 0.49
COPS7B-205ENST00000409295 FZD9O00144 591 aa18.08■□□□□ 0.48
COPS7B-205ENST00000409295 DDNO94850 711 aaPredicted RBP18.08■□□□□ 0.48
COPS7B-205ENST00000409295 KIAA2012Q0VF49 1180 aa18.08■□□□□ 0.48
COPS7B-205ENST00000409295 SLC51AQ86UW1 340 aa18.08■□□□□ 0.48
COPS7B-205ENST00000409295 ANKRD2Q9GZV1 360 aa18.08■□□□□ 0.48
COPS7B-205ENST00000409295 USP44Q9H0E7 712 aa18.08■□□□□ 0.48
COPS7B-205ENST00000409295 PODXL2Q9NZ53 605 aa18.08■□□□□ 0.48
COPS7B-205ENST00000409295 ZNRF3Q9ULT6 936 aa18.08■□□□□ 0.48
COPS7B-205ENST00000409295 LAMB2P55268 1798 aa18.08■□□□□ 0.48
COPS7B-205ENST00000409295 XDHP47989 1333 aa18.07■□□□□ 0.48
COPS7B-205ENST00000409295 RIMBP2O15034 1052 aa18.07■□□□□ 0.48
COPS7B-205ENST00000409295 UFL1O94874 794 aa18.07■□□□□ 0.48
COPS7B-205ENST00000409295 ATP2B4P23634 1241 aa18.07■□□□□ 0.48
COPS7B-205ENST00000409295 ZKSCAN2Q63HK3 967 aa18.07■□□□□ 0.48
COPS7B-205ENST00000409295 ATF7IPQ6VMQ6 1270 aa18.07■□□□□ 0.48
COPS7B-205ENST00000409295 TBC1D16Q8TBP0 767 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms