RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 GRIPAP1Q4V328 841 aa26.33■■□□□ 1.81
C4orf48-201ENST00000409248 KIF16BQ96L93 1317 aa26.33■■□□□ 1.81
C4orf48-201ENST00000409248 ZC3H4Q9UPT8 1303 aaKnown RBP26.33■■□□□ 1.81
C4orf48-201ENST00000409248 DICER1Q9UPY3 1922 aaKnown RBP26.32■■□□□ 1.8
C4orf48-201ENST00000409248 GRAPQ13588 217 aa26.32■■□□□ 1.8
C4orf48-201ENST00000409248 GRAPLQ8TC17 118 aaPredicted RBP26.32■■□□□ 1.8
C4orf48-201ENST00000409248 BCAR3O75815 825 aa26.31■■□□□ 1.8
C4orf48-201ENST00000409248 BBOX1O75936 387 aa26.31■■□□□ 1.8
C4orf48-201ENST00000409248 CCDC152Q4G0S7 254 aa26.31■■□□□ 1.8
C4orf48-201ENST00000409248 BEND3Q5T5X7 828 aa26.31■■□□□ 1.8
C4orf48-201ENST00000409248 UBE3BQ7Z3V4 1068 aa26.31■■□□□ 1.8
C4orf48-201ENST00000409248 TMC4Q7Z404 712 aa26.31■■□□□ 1.8
C4orf48-201ENST00000409248 FKBP4Q02790 459 aaKnown RBP eCLIP26.3■■□□□ 1.8
C4orf48-201ENST00000409248 SLC4A10Q6U841 1118 aa26.3■■□□□ 1.8
C4orf48-201ENST00000409248 JARID2Q92833 1246 aaPredicted RBP26.3■■□□□ 1.8
C4orf48-201ENST00000409248 LRRC37AA6NMS7 1700 aa26.3■■□□□ 1.8
C4orf48-201ENST00000409248 SNED1Q8TER0 1413 aa26.3■■□□□ 1.8
C4orf48-201ENST00000409248 TAF1P21675 1872 aa26.3■■□□□ 1.8
C4orf48-201ENST00000409248 H7C1W4 665 aa26.29■■□□□ 1.8
C4orf48-201ENST00000409248 ALDH1L1O75891 902 aa26.29■■□□□ 1.8
C4orf48-201ENST00000409248 ATP6V0A2Q9Y487 856 aa26.29■■□□□ 1.8
C4orf48-201ENST00000409248 CTSWP56202 376 aa26.28■■□□□ 1.8
C4orf48-201ENST00000409248 OLFM4Q6UX06 510 aa26.28■■□□□ 1.8
C4orf48-201ENST00000409248 SRCIN1Q9C0H9 1055 aa26.28■■□□□ 1.8
C4orf48-201ENST00000409248 PSMD1Q99460 953 aa26.27■■□□□ 1.8
C4orf48-201ENST00000409248 NOB1Q9ULX3 412 aaKnown RBP26.27■■□□□ 1.8
C4orf48-201ENST00000409248 IPO8O15397 1037 aaKnown RBP26.26■■□□□ 1.79
C4orf48-201ENST00000409248 PRELPP51888 382 aa26.25■■□□□ 1.79
C4orf48-201ENST00000409248 SP8Q8IXZ3 490 aa26.25■■□□□ 1.79
C4orf48-201ENST00000409248 FRAT1Q92837 279 aaPredicted RBP26.25■■□□□ 1.79
C4orf48-201ENST00000409248 PLA2G12BQ9BX93 195 aa26.25■■□□□ 1.79
C4orf48-201ENST00000409248 RTL9Q8NET4 1388 aa26.24■■□□□ 1.79
C4orf48-201ENST00000409248 GRM8O00222 908 aa26.24■■□□□ 1.79
C4orf48-201ENST00000409248 CASP7P55210 303 aa26.24■■□□□ 1.79
C4orf48-201ENST00000409248 ARHGAP45Q92619 1136 aa26.24■■□□□ 1.79
C4orf48-201ENST00000409248 API5Q9BZZ5 524 aaKnown RBP26.24■■□□□ 1.79
C4orf48-201ENST00000409248 GPBP1L1Q9HC44 474 aaPredicted RBP26.24■■□□□ 1.79
C4orf48-201ENST00000409248 ZNF526Q8TF50 670 aaPredicted RBP26.23■■□□□ 1.79
C4orf48-201ENST00000409248 CELF1Q92879 486 aaKnown RBP26.23■■□□□ 1.79
C4orf48-201ENST00000409248 C9orf78Q9NZ63 289 aaPredicted RBP26.23■■□□□ 1.79
C4orf48-201ENST00000409248 ZKSCAN2Q63HK3 967 aa26.22■■□□□ 1.79
C4orf48-201ENST00000409248 CDC5LQ99459 802 aaKnown RBP26.22■■□□□ 1.79
C4orf48-201ENST00000409248 ZNF277Q9NRM2 450 aaPredicted RBP26.22■■□□□ 1.79
C4orf48-201ENST00000409248 COL4A1P02462 1669 aa26.22■■□□□ 1.79
C4orf48-201ENST00000409248 RPS8P62241 208 aaKnown RBP26.21■■□□□ 1.79
C4orf48-201ENST00000409248 TTLL11Q8NHH1 800 aa26.21■■□□□ 1.79
C4orf48-201ENST00000409248 CCDC85AQ96PX6 553 aaPredicted RBP26.21■■□□□ 1.79
C4orf48-201ENST00000409248 KDM2BQ8NHM5 1336 aa26.2■■□□□ 1.79
C4orf48-201ENST00000409248 IARSP41252 1262 aaKnown RBP26.2■■□□□ 1.78
C4orf48-201ENST00000409248 DPP8Q6V1X1 898 aaPredicted RBP26.2■■□□□ 1.78
C4orf48-201ENST00000409248 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.2■■□□□ 1.78
C4orf48-201ENST00000409248 SUPT20HQ8NEM7 779 aa26.2■■□□□ 1.78
C4orf48-201ENST00000409248 SEC31BQ9NQW1 1179 aa26.2■■□□□ 1.78
C4orf48-201ENST00000409248 SPEF2Q9C093 1822 aa26.19■■□□□ 1.78
C4orf48-201ENST00000409248 CENPBP07199 599 aaPredicted RBP26.19■■□□□ 1.78
C4orf48-201ENST00000409248 ATF7IPQ6VMQ6 1270 aa26.19■■□□□ 1.78
C4orf48-201ENST00000409248 ANKRD18AQ8IVF6 992 aa26.19■■□□□ 1.78
C4orf48-201ENST00000409248 MPNDQ8N594 471 aa26.19■■□□□ 1.78
C4orf48-201ENST00000409248 SLC51AQ86UW1 340 aa26.18■■□□□ 1.78
C4orf48-201ENST00000409248 GREM2Q9H772 168 aa26.18■■□□□ 1.78
C4orf48-201ENST00000409248 TRIM27P14373 513 aa26.17■■□□□ 1.78
C4orf48-201ENST00000409248 LTBP1Q14766 1721 aa26.17■■□□□ 1.78
C4orf48-201ENST00000409248 DUOX1Q9NRD9 1551 aa26.16■■□□□ 1.78
C4orf48-201ENST00000409248 CCT4P50991 539 aaKnown RBP26.16■■□□□ 1.78
C4orf48-201ENST00000409248 RTFDC1Q9BY42 306 aaPredicted RBP26.16■■□□□ 1.78
C4orf48-201ENST00000409248 VPS33BQ9H267 617 aa26.16■■□□□ 1.78
C4orf48-201ENST00000409248 UTYO14607 1347 aa26.15■■□□□ 1.78
C4orf48-201ENST00000409248 FAM161AQ3B820 660 aa26.15■■□□□ 1.78
C4orf48-201ENST00000409248 JDP2Q8WYK2 163 aa26.15■■□□□ 1.78
C4orf48-201ENST00000409248 GLTPD2A6NH11 291 aa26.14■■□□□ 1.78
C4orf48-201ENST00000409248 CSF1RP07333 972 aa26.14■■□□□ 1.78
C4orf48-201ENST00000409248 DPY19L2Q6NUT2 758 aa26.14■■□□□ 1.78
C4orf48-201ENST00000409248 FTSJ3Q8IY81 847 aaKnown RBP26.14■■□□□ 1.78
C4orf48-201ENST00000409248 LARGE2Q8N3Y3 721 aa26.14■■□□□ 1.78
C4orf48-201ENST00000409248 PPIP5K2O43314 1243 aa26.13■■□□□ 1.77
C4orf48-201ENST00000409248 MS4A1P11836 297 aa26.13■■□□□ 1.77
C4orf48-201ENST00000409248 ITGA6P23229 1130 aa26.13■■□□□ 1.77
C4orf48-201ENST00000409248 IGHMBP2P38935 993 aaKnown RBP26.13■■□□□ 1.77
C4orf48-201ENST00000409248 NSFL1CQ9UNZ2 370 aaKnown RBP26.13■■□□□ 1.77
C4orf48-201ENST00000409248 FOXO4P98177 505 aa26.12■■□□□ 1.77
C4orf48-201ENST00000409248 CLUAP1Q96AJ1 413 aa26.12■■□□□ 1.77
C4orf48-201ENST00000409248 CHMP3Q9Y3E7 222 aa26.12■■□□□ 1.77
C4orf48-201ENST00000409248 ANKRD18BA2A2Z9 1011 aa26.11■■□□□ 1.77
C4orf48-201ENST00000409248 PLIN1O60240 522 aa26.11■■□□□ 1.77
C4orf48-201ENST00000409248 NBPF7P0C2Y1 421 aaPredicted RBP26.11■■□□□ 1.77
C4orf48-201ENST00000409248 RRP1P56182 461 aaKnown RBP26.11■■□□□ 1.77
C4orf48-201ENST00000409248 NIM1KQ8IY84 436 aa26.11■■□□□ 1.77
C4orf48-201ENST00000409248 DZIP1LQ8IYY4 767 aaKnown RBP26.11■■□□□ 1.77
C4orf48-201ENST00000409248 WDR90Q96KV7 1748 aa26.11■■□□□ 1.77
C4orf48-201ENST00000409248 COL4A5P29400 1685 aa26.1■■□□□ 1.77
C4orf48-201ENST00000409248 GPSM2P81274 684 aa26.1■■□□□ 1.77
C4orf48-201ENST00000409248 IFIT5Q13325 482 aaKnown RBP26.1■■□□□ 1.77
C4orf48-201ENST00000409248 AOC3Q16853 763 aa26.1■■□□□ 1.77
C4orf48-201ENST00000409248 LMBR1LQ6UX01 489 aa26.1■■□□□ 1.77
C4orf48-201ENST00000409248 BSDC1Q9NW68 430 aaPredicted RBP26.1■■□□□ 1.77
C4orf48-201ENST00000409248 ANKIB1Q9P2G1 1089 aa26.1■■□□□ 1.77
C4orf48-201ENST00000409248 TNNQ9UQP3 1299 aa26.1■■□□□ 1.77
C4orf48-201ENST00000409248 KIAA2012Q0VF49 1180 aa26.09■■□□□ 1.77
C4orf48-201ENST00000409248 SUCLG2Q96I99 432 aa26.09■■□□□ 1.77
C4orf48-201ENST00000409248 EYA3Q99504 573 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms